Os10g0368400

From RiceWiki
Revision as of 08:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0368400| Description = Similar to Adapter-related protein complex 4 sigma 1 subunit (Sigma subunit of AP-4) (AP-4 adapter complex sigma subun...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0368400

Description

Similar to Adapter-related protein complex 4 sigma 1 subunit (Sigma subunit of AP-4) (AP-4 adapter complex sigma subunit)

Version

NM_001070985.1 GI:115481713 GeneID:4348463

Length

2920 bp

Definition

Oryza sativa Japonica Group Os10g0368400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:11800173..11803092

Sequence Coding Region

11800449..11800583,11800682..11800750,11802682..11802768,11802903..11803043

Expression

GEO Profiles:Os10g0368400

Genome Context

<gbrowseImage1> name=NC_008403:11800173..11803092 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:11800173..11803092 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggatccggttcgtggtgatggtgaacaagcaggggcagacgcgggtggcgcaatactacgagcacctctccgtcgacgagcgccgcgccctcgagggcgagatcgtccgcaagtgcctcgcccgcaccgaccaccagtgttctttcgtggagcaccgcaactacaaggtggtgtaccggcgctacgcctccctcttcttcctagtcggcgtcgacaacgatgagaatgagttagctatccttgaattcattcatcttttggttgaaactatggaccgtcactttggcaatgtgtgtgagctcgacattatgttccatctggagaaggtgcacttcatgctggaagagatggtgatgaatggttgcattgtcgaaactagtaaacagaacatcttggcaccaatccacctgatggagaaaacttcttag</cdnaseq>

Protein Sequence

<aaseq>MGIRFVVMVNKQGQTRVAQYYEHLSVDERRALEGEIVRKCLART DHQCSFVEHRNYKVVYRRYASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCEL DIMFHLEKVHFMLEEMVMNGCIVETSKQNILAPIHLMEKTS</aaseq>

Gene Sequence

<dnaseqindica>2510..2644#2343..2411#325..411#50..190#gagagagagagaggagaagaaacaggaggaggaggagatcgaggaggggatggggatccggttcgtggtgatggtgaacaagcaggggcagacgcgggtggcgcaatactacgagcacctctccgtcgacgagcgccgcgccctcgagggcgagatcgtccgcaagtgcctcgcccgcaccgaccaccaggtcccaattccctcctttctcctttctcctttctccgccgccgaatcttgtgtggttcttggtagagagagagagagacagaggagatccgctctgatctgattggatttgtgtggtgcgtcaaaaatttgcagtgttctttcgtggagcaccgcaactacaaggtggtgtaccggcgctacgcctccctcttcttcctagtcggcgtcgacaacgatgaggtaatgcgtgtgaattcatcgtcctcctctctccccatcatcttcatggattcagttttaggcagcaccaattaataagcactgatatgaaggtagaattggtttgtatagacgacgtgtcaatggctgaaaatccgtctttgctgtagaggtgtggttgctctttgtcatccggggtcttctggctagctccataagctggtgggctagacgacttgggttcaaagcctcacactttctaattatttgatattaggtccttccctaatattcgcttctttttttgctctttgtcatctgtctttgctcaacccaaacacaaatgatgtgcttaggattgagtctaaaagggatagattttgcaattttacatgtatatttggctcgctcaatgtcatcattaacttgtgtcctatcattattgacctgtccttctatggcatatctgtacttggttaatttccactattattgtttgcaccgtgtctcaatcctgtattgttgagctccgatttgtttctagtgtctcaagcaatctttgctactagtttccccttcccccctggcacacttctgtgcgtctgaagcggaaatctaactggaggtcaacagcacttattttggcttctaagagttaatgtaaatccataagtttgatttgctatttactggaaatcaaattatttggatttacttgatgaatcataatagtttcaaatttccttgtttggcaaggtcgcaagagcatcatataaggactaatattactaattacatcgactaaaggagctctggagttaactctagaaactttgcaatgtcgagctcatgtgtactcagactgtgcatgtattaaatctgcaaacgttcagttcaaataaacataaaaggcagcctttatacatgttcttttagcagacattggagcaagcattgattgtattctacattgctgatacaatttgggcaaaagctttgttgcctgaaagcatcaaattatctcataaagaacccctctatttcgcatttggaactgctaacctctgattagtctgacggatatttcctgaacatcgatcttctacgatgtcttcagtggtagttaaacaaagcacgggtgaggtggacaaaatgatctaatgatggattgtcagccctcccatcagaaacacaacttcccctcattttggcacattgccaggatcaagcacatcagaatcaacgatgcgaggtagggagtgacgagagagggagagagaaagataggtgtttgaaataaggagaaatgatcttaccatccattccagaacccctaaaaatgtatatcaataaaaaagtgactactgccttgatctacagtcatgtcggttcatttacgttaatatttgttcagttatactcacgtgcaatggttcattaattgggtgcagtggtttgtttatgcccgtactgtcagattggttattacaatagtgggtcacaacagcagaggctagagggggcatgagggtaggtgctgttttcatttcaccaaacagtgccctgggcatctgacagtagattatattctagtatggtcccattttgtagggattaattttttacaatgtctctttattgagcctgctccctttggttagttgttaaccacctggcttatctatgaattttgttgcaattggtgatcgttcattttctcatctaatatgtttctactcaaacaatttatgtatctaagaaagaggattctccctccaaaccgttattgttttcatttttcaacttacaagagagatgggcacttgcatttcaaattttgtgatgagtagattatgttgtagctatacacaagagttctaaccatcgtcacatccattttcttgctttcgtccttgtaactgaatatgtttgaactgtgtctgttttggcagaatgagttagctatccttgaattcattcatcttttggttgaaactatggaccgtcactttggcaatgtggtaagcttgcctaatcccaacaaaattttcttatcatcgtgaatatccttacatgactagaactgatgattcttatcttttcttctttgtctgcacagtgtgagctcgacattatgttccatctggagaaggtgcacttcatgctggaagagatggtgatgaatggttgcattgtcgaaactagtaaacagaacatcttggcaccaatccacctgatggagaaaacttcttagaaaaatgctatccaacaggggagtgcctcatactgttctgcttatcgccaccgcctctgtgcttctatagatttttcatctcaatgtgtaaccatcaacgatttccatgtgcatagactattaaacttgacctgataggaaataatgagaatatgacagatgacgtctctgttctttaatgttatcttgctgtgagttgtgttatttactctaggataaataggttgaaaaccttatattagttgcaaaataataaaaaaaaactccatgctaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0368400, RefSeq:Os10g0368400