Os10g0377000

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Revision as of 08:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0377000| Description = Conserved hypothetical protein| Version = NM_001189195.1 GI:297727520 GeneID:9270624| Length = 2354 bp| Definition ...")
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Gene Name

Os10g0377000

Description

Conserved hypothetical protein

Version

NM_001189195.1 GI:297727520 GeneID:9270624

Length

2354 bp

Definition

Oryza sativa Japonica Group Os10g0377000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:12278836..12281189

Sequence Coding Region

12278885..12279036,12279135..12279230,12279547..12279623,12279734..12279942,12280800..12280892

Expression

GEO Profiles:Os10g0377000

Genome Context

<gbrowseImage1> name=NC_008403:12278836..12281189 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:12278836..12281189 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggcccttgtcaggtccgtggcgtcgctctactgccaggggctccggcgaaccgtccgcctcggcggcggcgccaccgcggggacaccggcggcgcgagcaccggcgctggatcaacggaggccgttcttgtccagggtggatcgcatagaggccaccaccggcggcggcggcggcggcgcggcggacacgggaggatcaccgcgccggcatggcaaagaaggaacagcccctctcttcacctgggcaagattggtcgtcgtcctcgccgccatggcgccgttcttgcagtccaagtgggcgacgcttctccgaatccaaagcgaggtggagatggtgaaggacgcggcggagacggcggcggaggtggtggaggaggtggccgcggcggtggagaaggcgtcggcggaggtggcggaggcggagcagctgccggagcacggggcgctgcggcgggcggcggcgctggtggagcgcgcgtccagggaggtcgccgaggaggctcatctcgcccacgacatcatccacaaggttgacgaaatcgaagaggacgtgaagacgatgatcgagccgattatagataatcacaagcatggcacaagaggcaccattaagaagcactaa</cdnaseq>

Protein Sequence

<aaseq>MSALVRSVASLYCQGLRRTVRLGGGATAGTPAARAPALDQRRPF LSRVDRIEATTGGGGGGAADTGGSPRRHGKEGTAPLFTWARLVVVLAAMAPFLQSKWA TLLRIQSEVEMVKDAAETAAEVVEEVAAAVEKASAEVAEAEQLPEHGALRRAAALVER ASREVAEEAHLAHDIIHKVDEIEEDVKTMIEPIIDNHKHGTRGTIKKH</aaseq>

Gene Sequence

<dnaseqindica>50..201#300..395#712..788#899..1107#1965..2057#gatcaaatagacatttactccgatatatcgcggtcgatcgttgtgaaaaatgtcggcccttgtcaggtccgtggcgtcgctctactgccaggggctccggcgaaccgtccgcctcggcggcggcgccaccgcggggacaccggcggcgcgagcaccggcgctggatcaacggaggccgttcttgtccagggtggatcgcatgtacgttactctgctccacctgctgtctctgtcgccgtgtggtctctctgtcgtcaggttgccggccgctgagtttgccgtcgtggtgtcatgtgcagagaggccaccaccggcggcggcggcggcggcgcggcggacacgggaggatcaccgcgccggcatggcaaagaaggaacagcccctctcttcacctggtacacagctagccagcccgtcgcgcgctgtaatattgatcgatcttgcacgcattttgccacgaattttttttcttcgattaaacggcagaggagcacaacgccactgcacacggaacaccgcactcgcatcttcacgaatatatgtgcataatatttctgggcataatattcgttatgaaaactaaactcattatgaaaacttatttgtatgtgcataatattcgtggacacctagatttaaaccacccaatcagttgcgctttccaattttaccacgaaattttattccgtcttgtcctaattctgttgccagggcaagattggtcgtcgtcctcgccgccatggcgccgttcttgcagtccaagtgggcgacgcttctccgaatccaaagtaaaaaaacaacacagacacacataaaacacacacgaattggttcttgcgattaattcatatcggacaggaacacgatctgagattcgttggatggccgttaattgcaggcgaggtggagatggtgaaggacgcggcggagacggcggcggaggtggtggaggaggtggccgcggcggtggagaaggcgtcggcggaggtggcggaggcggagcagctgccggagcacggggcgctgcggcgggcggcggcgctggtggagcgcgcgtccagggaggtcgccgaggaggctcatctcgcccacgacatcatccacaaggttagtactaaccattaattaatccttatctgatcacagttttgcagcttccataacagaggagtaagaaatctgctattttgcccaacactggattactgaaaacgatggtactccatggctttaagcaacactgaaaccctgacctttatgttgcttctactctattctactaatgtctccgtcccaaaatacatactactacaatgatatagataatttaacatacattaagactttttatggaaaaaaaaggctatattggcacttattaaatgatgtggatagtggagtgatattcgagagtatatcataggaagaaatttaaatgaaagatgatgcatgagataactaatactttaggcatgtgtttggttgaagagatgtcctgggatgggatcattctatttttaggggttgtgacatgagctaaaaagttttagccccatctaaacatccccttatgtgtttggttcagagattagataagatacgatggttccaaaagagaatattgcttcaatatttggaactatctcatctgccgaaagtatttttggactactataaagactactacaataagataagtattttagaataattttgaatcatataaagactactacaatgaagatagcgtcttctggtaccaaaaacagcgtaggctatggattcaaatttcaatttgaatttttctggcgggtaggcagatagctatgatttcaatttttgaatttgaacttgtcggtaaaatgagacaaatggtgggggcatggtttccggaaaaaccggatttttttttttaatatgcgagtcccaccagaaattatcaatcgaattgactgtttctacaggttgacgaaatcgaagaggacgtgaagacgatgatcgagccgattatagataatcacaagcatggcacaagaggcaccattaagaagcactaaattttcagagaactcaacttcagctctgtacaaatgttcagattgtttgtgcaaaacctcttaggtctttagccaatattcgtcgaatcggttaattcaattgttaatattcccctgttaagcagagcaacaaatgggagaagaatttatcaaactttttcagataatgttctacgaaattacttcacttatcttctatgaagcatgtaatgataatcatttccgcttgaaaaaaaacccgaataatatctcattttcaatcaatctccctctcggtctcgaattaatcaaacaaat</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0377000, RefSeq:Os10g0377000