Os10g0378100

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Revision as of 08:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0378100| Description = Cytochrome P450 family protein| Version = NM_001071014.1 GI:115481771 GeneID:4348498| Length = 8297 bp| Definition ...")
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Gene Name

Os10g0378100

Description

Cytochrome P450 family protein

Version

NM_001071014.1 GI:115481771 GeneID:4348498

Length

8297 bp

Definition

Oryza sativa Japonica Group Os10g0378100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:12347328..12355624

Sequence Coding Region

12347583..12347673,12347791..12347909,12350377..12350483,12350809..12350887,12350974..12351060
,12353696..12353968,12354059..12354208,12354947..12355570

Expression

GEO Profiles:Os10g0378100

Genome Context

<gbrowseImage1> name=NC_008403:12347328..12355624 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:12347328..12355624 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttaggctttaaatcactgatcaagatgagtggcgcaacggcggactgggcatggtggctcggcctcgtcgccggcgccgtcccgctgctcgccctcgccgtctggcactgcaccgacgccttccacagcgccgccttcgcgttccgccgccgcgggacacgcgcgaggctccccccgggccacatgggcctgccgttcgtcggcgagaccctcgccctgatctggtacttcaacctcgcccgccgccccgacgccttcatcgaggccaagaggcggcgctactgctacggcgacggcgacgacgacggcggcatctaccggacgcacctgttcggctcgcccgcggtgctcgtctgctcgccggcgtccaacgggttcgtgttccggtcggcgccgcccggcagcttcggcgtcgggtggccggtgccggagctcgtcggcgcctcgtccctggtgaacgtgcacggcggccggcacgccaggctgcgcaggttcgtcctcggcgccatcaacaggccgggctcactccggaccatcgcgcgggtggcgcagccgcgcgtggcggcggcgctgcggtcgtgggcggccaagggcaccatcaccgccgccaccgagatgaagaatgtgacgtttgagaatatatgcaagatattcgtgagtatggagccgtcgcctctaaccgaaaagatccacggatggttcaccggtttggttgctgggttcaggtcgttaccactggacatgccaggaacagcgctccaccacgctcgaaagtgccggagaaagctgaactcggtgttcagggaggagctcgagaggaggaaggtgaagatggtgaccggagaaggaggcgacgacgacgacgacggtgacctgatgagcgggctgatgcacgtggaggatgagcaaggtagacgactcgacgacgatgaggtcgtggataacatagtctcccttgtcatcgcgggctatgagtcaactgctagtgccatcatgtgggcgacctaccatctcgcaaaatcgcccagtgcccttgccaagctaagagaggaaaatttggccatagccaaagagaaaaatggtgatggttttatcactctcgaggatgtctccaagatgaagtacactgccaaggtagtagaagaaacaatccgattggccaacatagctccgatggctcaccgcgtggcactcagagatgttgagtaccgagggtatacaatcccaaaagggtggaaagttattgtgtggatccgatcactacatgtcgacccagcatactacgacaatccgttaagtttcaacccggatagatgggataaatcagcggagctaggcacgtaccaggtgttcggtggcggcgagaggatctgcgccggcaacatgctggcaaggctgcagctcaccatcatgctccatcatctctcttgtggttacaaatgggagttgctgaatcctgacgcagggattgtttaccttccgcacccaaggccaacagatggggcagtgatgtccttcagtgaactctga</cdnaseq>

Protein Sequence

<aaseq>LGFKSLIKMSGATADWAWWLGLVAGAVPLLALAVWHCTDAFHSA AFAFRRRGTRARLPPGHMGLPFVGETLALIWYFNLARRPDAFIEAKRRRYCYGDGDDD GGIYRTHLFGSPAVLVCSPASNGFVFRSAPPGSFGVGWPVPELVGASSLVNVHGGRHA RLRRFVLGAINRPGSLRTIARVAQPRVAAALRSWAAKGTITAATEMKNVTFENICKIF VSMEPSPLTEKIHGWFTGLVAGFRSLPLDMPGTALHHARKCRRKLNSVFREELERRKV KMVTGEGGDDDDDGDLMSGLMHVEDEQGRRLDDDEVVDNIVSLVIAGYESTASAIMWA TYHLAKSPSALAKLREENLAIAKEKNGDGFITLEDVSKMKYTAKVVEETIRLANIAPM AHRVALRDVEYRGYTIPKGWKVIVWIRSLHVDPAYYDNPLSFNPDRWDKSAELGTYQV FGGGERICAGNMLARLQLTIMLHHLSCGYKWELLNPDAGIVYLPHPRPTDGAVMSFSE L</aaseq>

Gene Sequence

<dnaseqindica>7952..8042#7716..7834#5142..5248#4738..4816#4565..4651#1657..1929#1417..1566#55..678#agtgcaccaagacaagctttgtacaatagcagcagcagcagcagagatcagtgattaggctttaaatcactgatcaagatgagtggcgcaacggcggactgggcatggtggctcggcctcgtcgccggcgccgtcccgctgctcgccctcgccgtctggcactgcaccgacgccttccacagcgccgccttcgcgttccgccgccgcgggacacgcgcgaggctccccccgggccacatgggcctgccgttcgtcggcgagaccctcgccctgatctggtacttcaacctcgcccgccgccccgacgccttcatcgaggccaagaggcggcgctactgctacggcgacggcgacgacgacggcggcatctaccggacgcacctgttcggctcgcccgcggtgctcgtctgctcgccggcgtccaacgggttcgtgttccggtcggcgccgcccggcagcttcggcgtcgggtggccggtgccggagctcgtcggcgcctcgtccctggtgaacgtgcacggcggccggcacgccaggctgcgcaggttcgtcctcggcgccatcaacaggccgggctcactccggaccatcgcgcgggtggcgcagccgcgcgtggcggcggcgctgcggtcgtgggcggccaagggcaccatcaccgccgccaccgagatgaagaatgtaaggcgccgtcttaatttgtcaactgagaattcactgggtttgtgtaggtgtagcacctactagtatttaaagaaaagattttacaactacatgcaaattatcatgatttttttaaaaaatatggatatctatcgcactacaaaatttcaatttaaaatatagctcctgtaaagagaaacgaagaataaaaatcccaacaagtagtaaaatgaggcctgttagtagtttagggattaagttctccggtcaaatagttataaaaactacaattaacaatttccaggataaaaaaatcttagagctccactacagtgctctctactagtagtagaaaacaatctaaaccattgatcttattttatcgaatggtttaaatctatttataccgccatcctagtaacggcagtaaaaatgtggagagacattattgaaaaaaataggtgctggaggggtataatatcatttagctttgactaaactcttttttctttctttttttggcttttttgatggaatatgagcgatatcaacccaatgtaggaccacataacaatttacctgaaaaaataaataacaaagttacccctaatcactgtattagtaaattattgatttacccttaaatagtactactagtattatactaccattagagagcaccagatcattgctcaaaatcataaatacatctcgttcatctcctatgaacatgaatgtatatgcttcttggatcaggtgacgtttgagaatatatgcaagatattcgtgagtatggagccgtcgcctctaaccgaaaagatccacggatggttcaccggtttggttgctgggttcaggtcgttaccactggacatgccaggaacagcgctccaccacgctcgaaaggtgatctcttttgatgttcccttttctctctttgcttggatttaacaaggccagatttcctatgccggcacacatctgcacaccatgcagtgccggagaaagctgaactcggtgttcagggaggagctcgagaggaggaaggtgaagatggtgaccggagaaggaggcgacgacgacgacgacggtgacctgatgagcgggctgatgcacgtggaggatgagcaaggtagacgactcgacgacgatgaggtcgtggataacatagtctcccttgtcatcgcgggctatgagtcaactgctagtgccatcatgtgggcgacctaccatctcgcaaaatcgcccagtgcccttgccaagctaagagtaagccaataatttactatagtatatttctctaaaagtgctttcaagtctcaaatggctctcacacatgaacagatcgatcccatatctggcatgttgctgtccgatgagcattcctacatatgaatggatcacttgatcacctgtgccatggccagaggcctaggattggcagcccattagtatggagaatttttaaccatataatcaccatgtaaatcccaactctctatgggccgacccaagccttgggccaatcctggtctgcccttagatcgatcccataactggtatgcttgctctccaatgagccctctcatcagtggcagattcaaaaaatttcttgaacctggacaagtctaacgagataaaagcatatacaaaatctatttaactatatataaattttgtagactaaaaccaacctgagaggttagatggattaatgtatcctgggctagacaagtatatttaactatacaaaaattttgtccttaataattgccatgtgttagcctagcaggatttgtactagtgtagcaggcggagcctgagcacctgcccatgatgatcgaccatggcttcatccctgcctctcatcatgcaaacaaacaaattatgtgagttgacatggagttggaatgaagagatggagaaagtggacgctagcaaaattacaaaaaaaaatatgagtttttaggaggttggggctaggagggaggggaaggaagcatcaaagaaggtgaaagaaaaggtgagatatgttaggacttaggaggtggtcaggagtgtcgtggacgctgttaacatccaaatttagctcctagattaaaagtaggaaaacatagtcgaatttgaaaaggactgtgtttccttcatgggtccggactgacatccgcctttgggtcagtctaactaatggtgtgggaccgatctgaccagtggtatgtggctggtatgactggcggcatatggccggtctgaccggctaagtccgatacgagtccaatttcaccaagtttcgggttttcttacttctgctaagggttttcaagttctaattggtctctgctatctcgagtaagacatggagaatgcattataggaggtaagaccaaccctttataaaggctatggctggttcagttgagcacattatctatgacaatctacttaacacaattagccaattgaatatctttttcaatatcgtatttactttttacctggttctagcctagtttcgtctatctttatcgatttgctccgtaaatcatctgccttcgtttcaagtgcgaatccctttttaggtttgtcttgtaaaccttccattctgctcacgagatgggtgtttatctctcttctgtctaaatcagctccattagccagctttgatcttcaaaacccatcttggtttggatttgtttagattgaggtggtaggcgactccttattactgaaaagaattaggtgttttcgatcgtgtttgacggcatgaacaaaaaaaaagttatcaatagatgcatgcacttaaaaggagagatggatagggatcgatcagcctcatcgacaaaatgtatgaggaggacgtataataggaagaagaaatattagaacaattggagagaaaaatgggatatgggaacggtttattcaatttctttcaccatccaaaatgattgttaaaactaaaatccacattgaaaactagtctagaaaatctgtttgagtgatcagctcctctctgcttccggccagccatcagggaaaagcatacccgcaggttaggctacaaatccacagcttgaattgcttttgatgtcctagatggaatgtacctacgataaagcgctacgatggacttgagtactgttgctacatagtgttttgtgccctacccttattttttgatttaagttatagattttacttttatttccgttagcacacttttcaaactgttaaacggtacattttgtacgaaaattctctatatagaagttgctttgaaatatcatataaataaatcaaaattttatgttttaaaaaactcaattaattatgtgttaatagcattttcattttacgtacccatacttgatcttttatcttcatagactcaaatgggccttaacaaatatccatgtaaacgtactacaaggacacacttgtcggtgtgcaccaaagtctcctacaacatataatgtcagggctgcaggtgtgtttttggatggagctatgtgcgatgtgagcaagaaggaactgagttagaaattttaatttatcccctcctaacttgcaaatggtaatattaatattgcaggagaggataagaggagctaagctaacactagcgaaaaaagtgtgcattagtgataattcactcaaagtgtgcattcccaattcataagatttctatggtctaattatggataaaccactgctgagaaacccatctttagtcccagttgagcagcttatgaactatttgaaccgggacaaaagtgatttttagtaaagatcaattctcttgtagtgcgctaaaaactctcacacgcgtgtatgcctacatgtatatagcctacacgatcgatacaaaagtactgtatgtgacttgctacatgacttactacaggaggaaaatttggccatagccaaagagaaaaatggtgatggttttatcactctcgaggatgtctccaagatgaagtacactgccaaggtttatgcagtaaattagtaaaagatgcttaattcatgaacacgtgattattccatataaacatattcagtcgagcatatatgcaggtagtagaagaaacaatccgattggccaacatagctccgatggctcaccgcgtggcactcagagatgttgagtaccgaggtgggtatcgttatatcatatactttggtcataattttttagaggaactttgataatcactaatataaaagtgagcacataaaaataaatgaacaaaaaatattaattacagatggtttgttttcccaaatacttttgtttttttaatgtaatggaagaatttgtatgcatatacaatgtctgcataatatgcaatttgcatggtatttgccaatatgttggtatcttggtataacatgcaggcaatagcaaactgatcaacggattaaaccaaataatcatatcaataggaaaataacattgatgttggtatatacacatgcagggtatacaatcccaaaagggtggaaagttattgtgtggatccgatcactacatgtcgacccagcatactacgacaatccgttaagtttcaacccggatagatgggatgtaagttattggttcgaaactacttattatatatatgtctctacaccaaacatgcaatgctgaaaaaacttctctatacattggccctctctttggaatgctgaaaaaactgaacatagctttaaatgcgacatgagcttttaatctgagtaaaaagatcaactgctggagtgccagctgctgcagagatcgtcatgaatctaaaaaataattcttgaaaacgcataataattgtgcttcatttcattaaaaaagatatatatttgcaaagagaaaaattcttgaaaacgcatgataattatgcttcacttaattgcaaaaagagaaatatttgcaaagaaagaggtcaaggaacctcttccaacgaggctagcatcacacataactgagagggccaagtgcccaaccaacacaaaccttctaagactaactcactaagcaatttatctcaacaaaatattaaccagtacacattttgttatagtaattatttcgtatgtatacgagtagagctcatctgaatggggaatgagaacattgggaagacaaacaatacaatcacacacacacatatatacgttggtgctttaaattttgatagatacaaatttaaaaataaagcctctagacatatatagggcatatacttgaggttattaacccatatatagatcattgttttttttagagcagatcaaacattaatttgacccggttttttggagaaagccgaaagagggatacagagtcttgaaatacaagaaaaaaggacacgacacacaaaacaaaaagtaatttctggggactccagctacatataatgcccacaacccagacagattcgcacaagcacaggttccaccccctcagacttgataggcacaaaagacaatgcccaacagacactaaagatctacaggcagcatagttggcctcacttgctttagtttgtccagtatagcttcaagccaatcctcgagcgcctttcgctcttcttcctttaggaacaccttccacttctgggcaaacgagattgacctgtaaacaacctgtagaggagatgaaacaaaagcatccttaaaaacccaatcattttgagtcaaccaaagagcccaacaaacactagctaaaagcaccatccaagcattcttcttcctcctgtcccaaattatcccagtgcactcctagaaggagataggtttattgctcagaaacaaagcttccttaattacacaccaggtaaacacagcaaaaggacagccatacatacaagatattattagttgtttctttgctcttgcaaagtttgcaaagctcatccccacccctccaatttcttttgactaactgagaagcacaaggaagttttcctctcccaacaaggtaaaggaaatgttttatttttagaggaatcttgcccttccaaatagaccacatttcagtatctttaaccctccccccctcccaaaaaaaaagttaacagcttatacatagatttagcaataaaagacttatgttttgtgtaaggtcggattacttcatccctatccccatcaagctagacatattggagaatattcttcatatcattcagttccacctctctttctgatttcaggttccttctaaaaaccagattccagtcgccattagcccacatctccatgacagtagctttttgctgcaaactaacctcatataacatgtgaaaagtcactttcaaaggagcatcaccataccaaacatcaccccagaagtccacaccactgccttcatgtactttgttttgcaccaatctttgcaggtgtttttttgtattgatgcaaacttttccaaaattgagagccccccgcctctgaactctagaaaaagctccattttccagtttcataacccacttgctaaggagactgatgttcataattctagtatctaaaaaacccatccccctaaaatcttttggtctacacaaagcttcccacttaatcatgtggtattttttcttctcccccaccccttggcagtagaatatgcttctagcagaatccattttggaatgaaaaccctcaggaagaaggtagaaccccatagcatacattggagcactggacatacatgaattaattttaatctctctgcccccataagataaatacccacttttccatgatttcattctcttctccactctttgaatgatctgataaaagtctttcatggtgatcttttccacactcattggcaaccctaagtaagtaaaaggcatctcccccaccttacaattcatcatgttagccactcttaattctcctcttcactcactcccagcacatacatctcacattttttatagtttattttcattcccaagggttcttttagcaaagcagtttattattttcttttgaacatgtgtgtcgatcactcgatatgcagtttattacacataagtgcattaattgatcagaaatcagcggagctaggcacgtaccaggtgttcggtggcggcgagaggatctgcgccggcaacatgctggcaaggctgcagctcaccatcatgctccatcatctctcttgtggttacaagtatttactaaacttccataccttaattaacattacatgtgtacaatttattattcttagtgttaactcaccttctgttcttttttttccttcactggctcaatttatctcttctagatgggagttgctgaatcctgacgcagggattgtttaccttccgcacccaaggccaacagatggggcagtgatgtccttcagtgaactctgatggcagctatatcattcagacatagaataaagtcaccagtacattctgtggcttaagaacttcagagttcatatatactattgctaggtgcaagactgattaagaaaaagctgagaagcaacaatgcatgatatgtatcacaccaagctgagtttctttaaatgtgttattcagttgttgttccacatgttttgtatatacgtaaataaactctaccaagaattcctgtctattaataaattgtgagcttttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0378100, RefSeq:Os10g0378100