Os10g0389000

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Revision as of 08:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0389000| Description = Similar to Centrin [Oryza sativa (japonica cultivar-group)]| Version = NM_001071033.2 GI:297610419 GeneID:4348517| L...")
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Gene Name

Os10g0389000

Description

Similar to Centrin [Oryza sativa (japonica cultivar-group)]

Version

NM_001071033.2 GI:297610419 GeneID:4348517

Length

3132 bp

Definition

Oryza sativa Japonica Group Os10g0389000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:13226970..13230101

Sequence Coding Region

13226970..13227112,13227237..13227300,13228224..13228326,13228442..13228594,13228766..13228793
,13229075..13229111,13229224..13229401,13229871..13229873

Expression

GEO Profiles:Os10g0389000

Genome Context

<gbrowseImage1> name=NC_008403:13226970..13230101 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:13226970..13230101 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcaaatacagaggctactaccacgacgaggcatcgtcggccgccggcggcggcggcggcggcggcggcggcgacgggtacaggagggagaagcaggtgaggaagaagcggctgacggcgcagaagaggaaggagatcaaggaggcgttcgacctcttcgacaccgatggatcaggtaccattgatccaaaggagctcaacgtcgccatgagagcactggggtttgagatgacaccagagcaaatacaccagatgatcgcggaggtggacaaggacgggagcgggacgatcgacttcgacgagttcgtgcacatgatgaccgacaagatgggcgagcgcgacgccagggaggagctcaacaaggccttcaagatcatcgacaaggacaacaacgggaagatctcggacgtggacatccagcggctggccatcgagaccggcgagcccttcacgctggacgaggtcagggagatgatcgaagccgccgacgagaacggtgatggcgaggtcgaccacgaggagtttctcaagatgatgaagaggataggatttggggccgggttaagttggtaccataccgccttatgttttgcaactggtgttttggtgactgagacgatgtacataattgtacagcagtacagataccaaggtagatcaaataaacacgagattgttattactcgaagaaaacattggtttg</cdnaseq>

Protein Sequence

<aaseq>MASKYRGYYHDEASSAAGGGGGGGGGDGYRREKQVRKKRLTAQK RKEIKEAFDLFDTDGSGTIDPKELNVAMRALGFEMTPEQIHQMIAEVDKDGSGTIDFD EFVHMMTDKMGERDAREELNKAFKIIDKDNNGKISDVDIQRLAIETGEPFTLDEVREM IEAADENGDGEVDHEEFLKMMKRIGFGAGLSWYHTALCFATGVLVTETMYIIVQQYRY QGRSNKHEIVITRRKHWF</aaseq>

Gene Sequence

<dnaseqindica>2990..3132#2802..2865#1776..1878#1508..1660#1309..1336#991..1027#701..878#229..231#gttcgattcattcgtcacggcacaagaaaccattcttaatcactcgccctttcttcctccatcagtccatctcactttggttccttcaagaaacgaagcatcaagaaagaggagaggagaggaaaagcaagtgaggtttcagacttcagaggtgctctggaggagtttggtctcgatcatcatctctctgaagcctgagagagtttcagctccgattaccacttgaccatggtatgcaagcttgccctctgcagatatgctgattgagatgctgattctcctatggctatgtcgacttcttcagattaattttactttgttggtttggtgtctggttttcatccggtttcttgatgagattagtttctgaccaagtagctgaatttcgttagcaacatatcgttttgtaagctttgcgcatgaaaccttgttatctgaatattttaaataagttcaagaattgcttattagaacaacgtaaccgtgatcctaaacatgtacatacttcaggttgaaaaaaaaattagagttcattttcagtttgctcccagtggttgcttctctgaagtcaattaggataaggataaacagaagcagcagttactgtggagagaatcagagcaagagtctgaaccagcagaaataaccaaaaaatttcgctgaaaaactctgaactgaaataaccacgagacgcatgcaggcgagcaaatacagaggctactaccacgacgaggcatcgtcggccgccggcggcggcggcggcggcggcggcggcgacgggtacaggagggagaagcaggtgaggaagaagcggctgacggcgcagaagaggaaggagatcaaggaggcgttcgacctcttcgacaccgatggatcaggttctgaatttttttttcctcatgcctcttctcctctttgcactgatcgatgaactgaaactcggtaattgctcacttgttcttgcttgcttgctttgctgcatccttgtaggtaccattgatccaaaggagctcaacgtcgccatgaggtacatatgtttcaatactattgtggctaagattgaattgttaacgcatgattaattaaatattaaaattttaaaagctatatttatatgatatatgtatattttttttgttttgattttttgtttttttacaaaactcgctctatagcaattcatgaaacgtgataacggataacatgggaactgtccaaagcaactgccgaaacagtcctaaatcctagtactaattataagctgtggctacaagctgagattttgttcatttttctgtgtgttttcagagcactggggtttgagatgacaccagaggtaccaaaacctgcctgagcatatatctcttccttttctgaatccatttctccgacgagggaagcaacgaaccgatatgttcatcagttgctggaagctaagctgacagtaaaaaaaaagcagaggatgacgacgattgcaaatgagaatcgttttcgtgtgcaaatgcagcaaatacaccagatgatcgcggaggtggacaaggacgggagcgggacgatcgacttcgacgagttcgtgcacatgatgaccgacaagatgggcgagcgcgacgccagggaggagctcaacaaggccttcaagatcatcgacaaggacaacaacgtcagtgtcctttccttcttcttcttcttcttattgttcttgttcttgttcttgttattgtggtcgttgttgtgcgtaatttgaatctgaatctgaatctgaatatgatgaacaggggaagatctcggacgtggacatccagcggctggccatcgagaccggcgagcccttcacgctggacgaggtcagggagatgatcgaagccgccgacgagaacggtctgatttgttgtttctcccacacccccagcattttcttttctgtaattggcttggattttaccaagcgattaactgggacatattctgtgcacataagattcaggtgctttcgccacactcacaaattacatgtgcatctaattttacaggataggattctattccctcaagggaacgtcccctagtgtaatttttcctctcaaatttaatgtaaatggttgtgaaaatttcttttttcttttttgcaaattagagtatactaacatctttcactacaccaaaaattatattcaaattcaatctacccgtggagaaataaataagacaaatccaaaggtgaatttgtctatttcttaatgtgtgagttgagtcttaccttgattttttttaattctttaagtagtttatatgtatatggtatgaatggtgtcaattttctttttcataattttcttatgactatttggatagcatttgaacaaatgagaagacatttcctcaatacccctcaagagtttaaaatactttccttaattttcgacatgtgtatataaagttttgatttcaaatatatagagtattattaagagatattttaataaatttatacccttaaaactgtcgcatttcttttctatttttttatcactgaaagataataaatttaaatgtgaaaatttgcatgtagatggagatgtataaacattatttttatagttttttctgtagcatttgttagccggtgcataccaccaatacgtcccaaacttatgtgcacctaatacgctcaatacgtcctaaacagctaaattgaaacttatgtgcatgtgatatgctgccataattgatggactagttggtgcacgaaacttgatcgaatgaggacggatggataataatccgaatttttggttttgcaggtgatggcgaggtcgaccacgaggagtttctcaagatgatgaagaggataggatttggggccgggtttttttagctcagcaagcagctaattaatcactagtgcttcagtaaacacaaaataatgtttggggaggtttaggcatgatgtaccgactggatggcatactatcactatgtacatatgtaggttaagttggtaccataccgccttatgttttgcaactggtgttttggtgactgagacgatgtacataattgtacagcagtacagataccaaggtagatcaaataaacacgagattgttattactcgaagaaaacattggtttg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0389000, RefSeq:Os10g0389000