Os10g0389800

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Revision as of 08:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0389800| Description = Protein kinase-like domain containing protein| Version = NM_001071037.1 GI:115481817 GeneID:4348521| Length = 5160 b...")
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Gene Name

Os10g0389800

Description

Protein kinase-like domain containing protein

Version

NM_001071037.1 GI:115481817 GeneID:4348521

Length

5160 bp

Definition

Oryza sativa Japonica Group Os10g0389800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:13279217..13284376

Sequence Coding Region

13279429..13279572,13279673..13279829,13279941..13280071,13280253..13280388,13280614..13280885
,13281265..13281554,13281645..13281946,13282020..13282085,13282167..13282232
,13282308..13282379,13282516..13282587,13282674..13282745,13282868..13282942
,13283028..13283099,13283192..13283324,13284217..13284316

Expression

GEO Profiles:Os10g0389800

Genome Context

<gbrowseImage1> name=NC_008403:13279217..13284376 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:13279217..13284376 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcctgggcatggccgctcgtcttcctcgtctcgtgctgctgttcttggacccagcggcgaatcttggttgctgcgaccactgacgccaatgatgttactgtcctcaatgcgctattcaccagcctcaattcgccggggcagctgcgcggttggcaggtgaatggcggtgacccatgtggcgcctcatggcagggcatcacctgctctggatcatcagtcacagcaattaaattgccgagcttggggctttcggggaatctggcctacaatatgaacaccatggagtccctagttgagcttgacatgagccaaaataatcttgggggtggccaaaatattcaatacaatcttccaaataagaagcttgagaggctcaatcttgctgggaaccagtttgctggaaatgtgccatactcaatttccacaatgcctaaacttaagtatctaaaccttaatcataaccaattacaaggaaatatgacagatgtcttttccaaccttccaagtttatcaacacttgatctctccttaaattctcttactggtgatctcccacaaagtttcacttctctgtcaagcctgaaaactttgtatctgcagaacaaccaatttactggatcaatcaatgtccttgctaatcttcccctggataatttaaatgtgggaaacaaccgttttactggttggattcctaatgagctaaagaaaataaatagtcttcaaaccgatggcaattcttggagcacaggtccggcaccaccaccaccaccattcacagcacctccaccatcacgcaaccgtaaaaaaagcccaggcagacactccaatggcagtggtagctcatcaagttctggtggaaattcagggttacgtgctggagctatagcaggaattatcgtagctctactggtcattggagcagttgtagcattcttcttgataaagagaaaacgcaaaggtacaaggcaagaacatgttgaacagcgacagcctttcaattcatacccttccaatgaagttaaagatgtgaagcctataccagaatccaccaagatagaggtggagcctttgccttcccctgtggccgttagtctaaaaccacctcctaagattgagcgcaaccagtcatttgatgacgatgatgatgacttttcaaacaagcctgttgcaaagaaaagtaattcagcatcagtaaaagcaacagtttattcagttgcagacctacagatggcaacagatagtttcaacatggacaatcttgttggagagggtacttttggacgtgtttacagggcacaattcagtgatggaaaggtactagctgtcaagaaactaaacagtactgtgttgccaagccaatcttcagacgatttctttgacttggtgtcaaacatttcaaagttgcaccatcccaatctcaatgagcttgtgggctattgcatggagcatggacagcacttgctagtttatgatttccacagaaatggttcgctgcatgatatgcttcacctcccagatgaatatagcaaaccactcagctggaattctcgtgttaagattgcgttaggttctgcacgggcactagagtatcttcatgaaatttgttctccttctattatccacaagaacttcaagtcatctaatatcttgctggacaccgagttcaatcctcatgtttctgatgctggacttgccagcagtgttcctgattctgaattccaggcttcagatcagggttctggatatagtgcccctgaagttgacatgactgggcagtataccctcaagagtgatgtttatagctttggagttgtcatgctggagctcttgacaggccgcaaaccatttgacagcgctagactccggacagagcagtcacttgtccggtgggcaacgccccagctgcatgacatcgatgcgttggaccggatggtcgacccagcgctcaagggcctgtaccctgccaaatccctgtcccgtttcgcagacgtcattgcgctgtgtgtccagcctgagccggagttcagaccgccgatgtctgaggtggtgcaagcgctggtccgccttgttcagagggccaacatgactaggagaatgatcgacggcgaagagggttctcgaagaccagatgaccaggaccaggagttcgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MAAWAWPLVFLVSCCCSWTQRRILVAATTDANDVTVLNALFTSL NSPGQLRGWQVNGGDPCGASWQGITCSGSSVTAIKLPSLGLSGNLAYNMNTMESLVEL DMSQNNLGGGQNIQYNLPNKKLERLNLAGNQFAGNVPYSISTMPKLKYLNLNHNQLQG NMTDVFSNLPSLSTLDLSLNSLTGDLPQSFTSLSSLKTLYLQNNQFTGSINVLANLPL DNLNVGNNRFTGWIPNELKKINSLQTDGNSWSTGPAPPPPPFTAPPPSRNRKKSPGRH SNGSGSSSSSGGNSGLRAGAIAGIIVALLVIGAVVAFFLIKRKRKGTRQEHVEQRQPF NSYPSNEVKDVKPIPESTKIEVEPLPSPVAVSLKPPPKIERNQSFDDDDDDFSNKPVA KKSNSASVKATVYSVADLQMATDSFNMDNLVGEGTFGRVYRAQFSDGKVLAVKKLNST VLPSQSSDDFFDLVSNISKLHHPNLNELVGYCMEHGQHLLVYDFHRNGSLHDMLHLPD EYSKPLSWNSRVKIALGSARALEYLHEICSPSIIHKNFKSSNILLDTEFNPHVSDAGL ASSVPDSEFQASDQGSGYSAPEVDMTGQYTLKSDVYSFGVVMLELLTGRKPFDSARLR TEQSLVRWATPQLHDIDALDRMVDPALKGLYPAKSLSRFADVIALCVQPEPEFRPPMS EVVQALVRLVQRANMTRRMIDGEEGSRRPDDQDQEFV</aaseq>

Gene Sequence

<dnaseqindica>4805..4948#4548..4704#4306..4436#3989..4124#3492..3763#2823..3112#2431..2732#2292..2357#2145..2210#1998..2069#1790..1861#1632..1703#1435..1509#1278..1349#1053..1185#61..160#actctctcttgttcctataaggagaggagagaaggagagagaggaggtggaggaggagcaatggcggcctgggcatggccgctcgtcttcctcgtctcgtgctgctgttcttggacccagcggcgaatcttggttgctgcgaccactgacgccaatgatggtgagctgctggggaaaaggaaaaaaagaagaagaaaatctctgtttgggttggggtctcattgtttgcttgcttgtgcttgtgcttttcttttttgttttcttgcttttgaggttcttgattcctttgttctggaccgccatggatttttggtcgggagaaggcaagattttgtctttgcagcattgggaccatggggggtgtctttgctggttcctgctttgaatgcctgtacccacatctttggtggcgtttgtttctgctgagctggagattttgtgaatgcttgttcgtctctttcttttgctgatgtttattgctctgagttgttaagctaaatcttgttttgttggatcacatgatgtggtttttcggtagatttgggaggaatgaggattttgagcagctttctcttgccccaaatctttcagcagctgtcagcacagtccagacacctttgctggttgatttgatcattgatggggattctgagctagggtttgcattgggatctttgggaaactctgcatctatgcacctggagtgtgttgttcattctgtttgatgattgtaggggagaagttttagtttcaggggagataaatgagttaatgaccattgtaggagcattcaatcatttgtaaagtataccagaaccaacaaaattgcccaagatggatccgtgacatcattgctcatccaaagtagattcagtttagtagctatttgcatctgtgatccatttcattggtcctgatatcatgtgaatctctaggtgggactggtccagctttccgttataagtaatcatgtattcatgttaactgaaaatttgtctggcgatattccacacctattgacttgaagtaattctttactttttattatgcagttactgtcctcaatgcgctattcaccagcctcaattcgccggggcagctgcgcggttggcaggtgaatggcggtgacccatgtggcgcctcatggcagggcatcacctgctctggatcatcagtcacagcaatgtgggtagtgtggttgcataattcaatgttcttgcttgtgagcccaatttattgttttctctgatgtgtttttctcttcctggttctactagtaaattgccgagcttggggctttcggggaatctggcctacaatatgaacaccatggagtccctagttgagctgtgagtttggataatggaatttttggagtagttctttctgtttgggagttcacttggtgattaacttgatcataattccatgcagtgacatgagccaaaataatcttgggggtggccaaaatattcaatacaatcttccaaataagaagcttgagaggctgtaagttcctcagatgttgccattttataatctattttagggaaaaaaattgtactgacacatactatctaattgttctttgttatttatggcgataatttaagtgaattttttatttgcagcaatcttgctgggaaccagtttgctggaaatgtgccatactcaatttccacaatgcctaaacttaagtatctgtgagtaccttttgacccaaatacaaatttgccttgaaattcatattgtactctatgggttaattggattttctttgtgaatacagaaaccttaatcataaccaattacaaggaaatatgacagatgtcttttccaaccttccaagtttatcaacactgtgagtactcttacttaaaacaagtattctaggttgatctcaatgtgcacacaaaattcttctaacttctctgtttgcatttcttacaagtcacgatgtatctttgctcttactatatttctgtacattgctacagtgatctctccttaaattctcttactggtgatctcccacaaagtttcacttctctgtcaagcctgaaaactttgtaagaaggaactttgaataatataataaatttataagttctcttatacctataacctatgttctatcttaccaggtatctgcagaacaaccaatttactggatcaatcaatgtccttgctaatcttcccctggataatttgtaagcaaatcattttgaaggtataaatcggttatatcacacaatattgtactaagtccagtttttcctcctttattgcagaaatgtgggaaacaaccgttttactggttggattcctaatgagctaaagaaaataaatagtcttcagtaagtattgcttatgtcttagttccctaatgttttggatggctgcatcttgaactaatgttatgttcaacagaaccgatggcaattcttggagcacaggtccggcaccaccaccaccaccattcacagcacctccaccatcacgcaaccgtaaaaaaagcccaggcagacactccaatggcagtggtagctcatcaagttctggtggaaattcagggttacgtgctggagctatagcaggaattatcgtagctctactggtcattggagcagttgtagcattcttcttgataaagagaaaacgcaaaggtacaaggcaagaacatgttgaacagcgacagcctttcaattcatacccttccaatgaagttaaaggtcagtgtttgagtgttgcagtgtttgatataccatgatcgacactttagttttgtaagttataatgtatgcatggttctacaaatgcagatgtgaagcctataccagaatccaccaagatagaggtggagcctttgccttcccctgtggccgttagtctaaaaccacctcctaagattgagcgcaaccagtcatttgatgacgatgatgatgacttttcaaacaagcctgttgcaaagaaaagtaattcagcatcagtaaaagcaacagtttattcagttgcagacctacagatggcaacagatagtttcaacatggacaatcttgttggagagggtacttttggacgtgtttacagggcacaattcagtgatggaaaggtacgcatgattgcacttgccatttgcttgagagaatagcaaaagatatcttactgtgcagtttttaaaactgtgctgtaaatttgattttagagtaacttttcctacataaatgcacctaagcaatcttagaggcagaagcaatacattcatacatggtttccatttcttcctagcaatagtgacaaaacttcattcatttatagtacaatatgtaaatgaaaatattgagttgattgctttcttaccaattcagatttccaccatcatatatttgttctgccttggaagttaccaagtgtttcacacttggatatacaaagacagttcatttcttcacatgatcaatgtggcttacatttctccttatatgaatcaggtactagctgtcaagaaactaaacagtactgtgttgccaagccaatcttcagacgatttctttgacttggtgtcaaacatttcaaagttgcaccatcccaatctcaatgagcttgtgggctattgcatggagcatggacagcacttgctagtttatgatttccacagaaatggttcgctgcatgatatgcttcacctcccagatgaatatagcaaaccactcagctggaattctcgtgttaagattgcgttaggttctgcacgggcactagagtaagtgaaaactaagatctctctccctatctgttggatacttttcaaataaattattgtcttttttccaacttaatgacttgtgaaaattgatctgacttgccattataatagaatggaatgtgataggtaaataacgagtatatgcacaaatcacttgtaaattctcttaattgcatggaattctgtcaacacctaatcacctttcctgttaactttctgtaggtatcttcatgaaatttgttctccttctattatccacaagaacttcaagtcatctaatatcttgctggacaccgagttcaatcctcatgtttctgatgctggacttgccagcagtgttcctgattctgaattccaggtaaaactcaaatcattttgctccaacaaacatatatattttcaattgtaaagaaatttatggtcttacttaaaaaaggaaacttaagttctgaatggattggttcttttcttgagtatccaagatgttacacaacatatggcttaccatatttttcatgtttccaaataaatctcaataggcttcagatcagggttctggatatagtgcccctgaagttgacatgactgggcagtataccctcaagagtgatgtttatagctttggagttgtcatgctggagctcttgacaggccgcaaaccatttgacaggtattcctatttttctctgattctgcatccctgaattgtttatgcctacatttgatgattcctaatttcttagtcctgacccctgactgttgtgtcaaactatcgtctcagcgctagactccggacagagcagtcacttgtccggtgggcaacgccccagctgcatgacatcgatgcgttggaccggatggtcgacccagcgctcaagggcctgtaccctgccaaatccctgtcccgtttcgcagacgtcattgcgctgtgtgtccaggtatataaccttcactcctggtacaatgcagtttgccagcatattcataactgaacaccaaggatctgaattataccaaccaaaaccttcactatttcagcctgagccggagttcagaccgccgatgtctgaggtggtgcaagcgctggtccgccttgttcagagggccaacatgactaggagaatgatcgacggcgaagagggttctcgaagaccagatgaccaggaccaggagttcgtgtaacatgttgagacagatcttgtgttgaacctgcatcctatctctctggtgactgtaatatgtttggttcctagaacctgatgcagatggggaaaggggaaaaatggagggggaaatactgaactttcaactcatcagtacatattcacaggttttgtctcgtataatgaaattacaagtttggctgcttcatgcctaatgatatcagcttgctc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0389800, RefSeq:Os10g0389800