Os10g0394100

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Revision as of 08:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0394100| Description = Metallophosphoesterase domain containing protein| Version = NM_001071057.1 GI:115481857 GeneID:4348542| Length = 510...")
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Gene Name

Os10g0394100

Description

Metallophosphoesterase domain containing protein

Version

NM_001071057.1 GI:115481857 GeneID:4348542

Length

5100 bp

Definition

Oryza sativa Japonica Group Os10g0394100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:13506404..13511503

Sequence Coding Region

13508625..13508716,13509063..13509198,13509419..13509634,13509726..13509839,13510161..13510264
,13511122..13511392

Expression

GEO Profiles:Os10g0394100

Genome Context

<gbrowseImage1> name=NC_008403:13506404..13511503 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:13506404..13511503 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtgctcccgccgccggtgagggttgcggctgcggctgccgccaccacgttcgggctctcgacgtcgccggcggcggcgacgccagctggttgccgtcgttgtggtcctagaggccgcgctgccgtgcacgtggccatcagcgcgagcgggcgggcttctttctcgcgcggtgcggctggtgatggcggcggcggccgaccggccatcaccgtcgccggtgacccgcccacgttcgtcaccgcgcccggccgccgcatcgtcgccgtcggtgacctccacggtgatctaaaccaaacgagggcggcgctagtgatggctggtctcctgagctcggaatcggatggccatgtatggacaggagggcagacggtgctggttcaagttggagatatccttgaccgtggcgaagatgaaatcgcgatactatctctcttaagttcactgaatatgcaggcgaaatctcaagggggtgctgtgtttcaggttaatggaaatcacgaaaccataaatgtggaaggcgattatcggtatgtagatccaggagcatttgacgagtgcatacgcttcatggagtatttggatgaatgtgatggcaactgggatgatgcttttctcaactgggttaatgtttgtgaaagatggaaggaagaatatccaatgtcacctaatggtgactggcgtccttggaactttgtcaagaagcagaaaggtattgctgctagatcatcacttttcaagcgaggtggcccgttagcttgtgaattggcgcgacatcctgttgtgctaagtgttaatgactggatcttttgccacggcggccttcttcctcatcatgttcatcttcattctacctgcagtcgaatatggtatcgagcgtatgaacagagaagtttcggtttggatgaaaagttcaagtggagacagtga</cdnaseq>

Protein Sequence

<aaseq>MAVLPPPVRVAAAAAATTFGLSTSPAAATPAGCRRCGPRGRAAV HVAISASGRASFSRGAAGDGGGGRPAITVAGDPPTFVTAPGRRIVAVGDLHGDLNQTR AALVMAGLLSSESDGHVWTGGQTVLVQVGDILDRGEDEIAILSLLSSLNMQAKSQGGA VFQVNGNHETINVEGDYRYVDPGAFDECIRFMEYLDECDGNWDDAFLNWVNVCERWKE EYPMSPNGDWRPWNFVKKQKGIAARSSLFKRGGPLACELARHPVVLSVNDWIFCHGGL LPHHVHLHSTCSRIWYRAYEQRSFGLDEKFKWRQ</aaseq>

Gene Sequence

<dnaseqindica>2788..2879#2306..2441#1870..2085#1665..1778#1240..1343#112..382#gactcgaggctcgaccctttcactgcctccactccagttacagcgtggtttcaccaccacgtctcgtagaggattagacgagtaaaacagcgggcgtacggacggccagcgatggcggtgctcccgccgccggtgagggttgcggctgcggctgccgccaccacgttcgggctctcgacgtcgccggcggcggcgacgccagctggttgccgtcgttgtggtcctagaggccgcgctgccgtgcacgtggccatcagcgcgagcgggcgggcttctttctcgcgcggtgcggctggtgatggcggcggcggccgaccggccatcaccgtcgccggtgacccgcccacgttcgtcaccgcgcccggccgccgcatcgtcgccggtatgctatatatacgtgctcgccgaacacttgttccggtatagataaaaactagtttattgtccatgtttatacgtgctacatcagttcatttttctatttgcattgggaatcatctttagaaaaaaaatactctctccatttcaggttacaagacgttttgactttgtcaaaagtcgaactacttcaactttaattaagcttatagacaaatatagtaatatttataatatcaaattagtttcattaaatcaataattaaatatatttttataataaatttgtcttgggttaaaaatgttattatttgtttttcttcaaatttagtcaaacttaaagcattttgactttgaccaaagtcaaaatgtcttataacctgaaacgaaggaagtagaaactaattgtttgtaagttcatttccaaactatttgggaggaaaaggtgttcataggggtatggtagggtgtgcgcgcttgtgttcatagaggcgtacgttgtgagtgtctgcgtttgtactgtgtttctaaaaaacacatgaatttatttactgacaaaaaatacattaaacaaaaaaaaacagaatttgatgttagtgctaagtacacattaccaaatttatttgctacgtctaggtaaactgaataatagaaattaataaacctgtgtgtgcaccccccataattccaagttaagcttattttcacaaaatttggagattttaacagcatgcgatttctgccttgaaaaggtactaccttcatctcaaagtcttttttttttgggacgaaggtagtaacatttgaactccgatggtagtttaattgcttcataatagtgagtcaacttgaaattcgcagtcggtgacctccacggtgatctaaaccaaacgagggcggcgctagtgatggctggtctcctgagctcggaatcggatggccatgtatggacaggagggcagacggtatagaaccatttcctgtcctatgtttgttgcatttagttcattgaattttgtttaaaagttctttttcacagaaatatactcaaatttataacaaaattagtaattgcatttgcatgccagccaaaactcaaaatgtgtaagtttgtactatacttaatttgcatggatcacacacagtacattgtgcttccttccttttagcatagatgtaactgtggtatcttctgctagatctcaggtgcagctactcttctgttctgcagtatcctcatctctccacagagaagaagaatgtgaaatgttttcatttttgtacaggtgctggttcaagttggagatatccttgaccgtggcgaagatgaaatcgcgatactatctctcttaagttcactgaatatgcaggcgaaatctcaagggggtgctgtgtttcaggtattacctttacttactgtacctttaaatgctctatggttttgttgttacttattcatgtcctggtttggaacttaatcccatccggtaggttaatggaaatcacgaaaccataaatgtggaaggcgattatcggtatgtagatccaggagcatttgacgagtgcatacgcttcatggagtatttggatgaatgtgatggcaactgggatgatgcttttctcaactgggttaatgtttgtgaaagatggaaggaagaatatccaatgtcacctaatggtgactggcgtccttggaactttgtcaaggtaagaaagccattgaatggtttctgcctcaagtactgtccaacatgttcagttagtcagttttggacaaaattaccttttggattatctataataaaatgaaaccaaaatcaaaactcaaggtcaataaaatttcctttaacaaataaccttggaaaagatggtattatcataatttctgatgcttcagaaatattttccttgaaatgtgttgaggcagaagcagaaaggtattgctgctagatcatcacttttcaagcgaggtggcccgttagcttgtgaattggcgcgacatcctgttgtgctaagtgttaatgactggatcttttgccacggcggccttcttcctcatcatggtgagccctctcatcttgtagtcacccaggcatgtgcattttgctgatttgatattcctctgaagtctgaacccttctgctcaatataatgccaagcaaaatgccatgatatttcgatattactgtgaactttagtcactctagcatgtatctcttctgctataggtcttactatattacactctgtactgaccagaatactaggtacacaaaaaattaaattccagaacatactatagtttgagatcagcatgaactagcgcggttcctgtactctaaccaaatttcacacataatatcctatttgatcacaaggattgcatcaagtgattcataatattttcagttcatcttcattctacctgcagtcgaatatggtatcgagcgtatgaacagagaagtttcggtttggatgaaaagttcaagtggagacagtgatgatgaattagatatccccttcatagcaactagaggttatgacagtgtagtatggagtcgtttgtactcacaaggccctacggaaatgacgcgtcattcctggaaggtgagaaaattttatcgataaaacatatgcttattttgcactatggtctatggaaaatatatcaatagcactattgataagattatcacagacttgtcaaattatttttgttggtttcagctatcttctgtggttgctgaacgaacactgaaatctgtgggagcaaaagggatggttgtagggcacacaccccagactcgtggagtgaattggtatctgttgttctcacttgggtaatttacaactgaaaaaacatcaagagaagtaataggtgattatttctttttcccagcaaatgcgatggcaaggtttggtgtgttgatgtgggcatgtcttatggtgttctctattcaaggccagaggtaaactttcgttttgcctggaaatttggtatgccttggttcttcatagacatttagcagttcattttctatctctgttaatagctgtgttgtcatgaaacagttactgatttggttggtagtgtgttgttcagtttttctgatcctctgcgcaacatgtatactaacttatttgcagtaacctacatattaaagccatgaaatttttctaggaatattaatgcagacatattaattgggtatatgctgaatctcttgtttgaaattctatcctccttggcatatttatcaagtagcagcatagcaggcaatatgttgatgcccataatttttttccccggagtttgatgtgcaactctattgaattaggtcctagaaataatcaatgacagaccaagggttttgaagaatcggagggactcatacgacgagatggaagttttagacttcatataaaaccttaagaaacctgcgtaagcactctaaattcatctcaatctcttgttcatctctgaaaagtgaagacagttaaattatgttaactttttacctggcgaagttgcattatttttaccctgatggctgatagccattttgttatcagtaaaccaccaatgtaatttcttcatacatattgatgacttgctgttcattggaaaatcatagatgtgcaggcatgtataggaaaaattctttttctggaaagctactgtactggacaattttggatggacatacaggagtggaagtactagagggacagatgacttgtatacacaaatgggaattgatctgccttcctccatggtatgtacattcgttttattttattaaggaaactgtattcactaactgttgtttgaacaaaattgcatagccatcaatcttgtatttggagatcatgaacagtttgaaagatatagataaatcacttcactcaataatataagcattcataaccttccaaataaaaataatctaagcgtacatgttttaccatattcactaatttgtatgtataaatttttaactgaagcttcattaaatttgattgtttgttctaccaattaagggattattatttaagtaaaagaaataagggattattatgttaggatataattgtgaatggcatatcttaaagcgcagtgaagacatgctaaaacctcaagtactcaagagtatgtctgctgcacataagagtatgcttgtacttgattgaatcaaatcacagattttagattatgttaaaagttttagaccactaaacctcctgaaccgtataacattttgataagtaattgtgctacagttattttctgacagaacatccagaaagaaatacccatgctagcttctgtagactgtagaaaactgccattgagtacttgcacgcaaggaagctgaaggtcagaagcttatctcaacaaattggtggtgcttgtctataccagcatacaaatttccccatgaggaatttctcatggccctcgtcaagtctaactcaagagtccagacatggcaggaattattaaagcagtgtaattaactggggaaggcatgtataactgattaattgtatattcatagcattctcatacatctgtagaaaacatgtgctatttcctttatggtggccatagcacacccagacttgtagcattcaaacaaacagaccttgtgaagcatcggtagcattatttcatctctagcatacagcacaaaaattcaacagagatacatttgacaaatg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0394100, RefSeq:Os10g0394100