Os10g0406300

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Revision as of 08:37, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0406300| Description = Similar to AOBP (Ascorbate oxidase promoter-binding protein)| Version = NM_001071098.1 GI:115481939 GeneID:4348585| ...")
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Gene Name

Os10g0406300

Description

Similar to AOBP (Ascorbate oxidase promoter-binding protein)

Version

NM_001071098.1 GI:115481939 GeneID:4348585

Length

2664 bp

Definition

Oryza sativa Japonica Group Os10g0406300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:14239950..14242613

Sequence Coding Region

14240585..14240740,14241169..14241510,14242367..14242453

Expression

GEO Profiles:Os10g0406300

Genome Context

<gbrowseImage1> name=NC_008403:14239950..14242613 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:14239950..14242613 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtgagtgcagaggaggaggaggaggaggagatgggctgatcaagctgttcgggaagacgatcccggtgcagccggatgccaaggatgttcagcagcatagtggcagtagcagcagctcaaccgaatccgacgtccaagaaaccgccgctgtcgccgtcgccgacccctccccgcggtcggaggtcgtcgacggcgagagcccgccgcagccgggcggcgaggcggcgagccatcagcagcagcagaaggagatgaagctgaagaagccggacaagatcctgccatgcccgcggtgcagcagcatggacaccaagttctgctacttcaacaactacaacgtcaaccagcctcgccacttctgcaagcactgccagcgctactggaccgccggcggcgccatgcgcaacgtccccgtcggcgccggcgtactggggctgcatgattccacctcctggagcttggagcctcccatggccggccacagtccagtctcaggccatctcatcatcatcaccacctacaagtgctacaccttcagtctcctccttcacactaggcaagcatcccagagagggtggtga</cdnaseq>

Protein Sequence

<aaseq>MGECRGGGGGGDGLIKLFGKTIPVQPDAKDVQQHSGSSSSSTES DVQETAAVAVADPSPRSEVVDGESPPQPGGEAASHQQQQKEMKLKKPDKILPCPRCSS MDTKFCYFNNYNVNQPRHFCKHCQRYWTAGGAMRNVPVGAGVLGLHDSTSWSLEPPMA GHSPVSGHLIIITTYKCYTFSLLLHTRQASQRGW</aaseq>

Gene Sequence

<dnaseqindica>1874..2029#1104..1445#161..247#aattccctcctcctccctcctacaaccccaatcccccttcttcttcttcttcttgtacttgttgttcttgctcttgttccagtgttgcagcagcagcagcagcagcggaggcgcaagaagacgagctagagagagagaatcagaggagagcttgggtgagatgggtgagtgcagaggaggaggaggaggaggagatgggctgatcaagctgttcgggaagacgatcccggtgcagccggatgccaaggttggttttgttcctgccctgcttcgatcgatcaggatcgtcgtttgtcgttgttgttgttgtttttgttttttttgttttagtttttgattcttggctctgcgtctcttggggaattttcggtttgggtctctgctctgtaattcttgtatgtctcttctcatcttaaactgcaaaaaatcttttgtttttcttttatgtgaaggcataggaggccttccaaaggtgcagtagtgagtgctagtttgaagagtttgatgaagctgaaatttctattaggaaaagtataaagatttttttttatttacagttcataaggaagggtgatggaagtcattttttctcttaaataaatatatgctaatttaagttggtgtggtatggggggcttgatttggtgcaaatctagagtttctgaagatggacctgacctgtttggttggtctcttcagagtttttaggagttgagacaaagccttgtcttttagcctcctaggatccatctatgttggtccaaatttcctttcttataagctgtgaaagaaaaaactagtaattttccaaccttcagatagagttcagaaacaggaaccaattcccaatacagcaaaagtacctagtactgtaaccctgaaacaacaaaatggaaataaatattttctctctctaaatttgcactcatggatagtatcagataattacaaatatgtggtgatgttaaccatagcctgtacagttgtatcctcctgatttatacccaaaaaaaggctaaaaaatttacagtgtttatcaagaactatagtaattatcacttcttcagaactgatcaactaatttgactgttgctaatttgcaggatgttcagcagcatagtggcagtagcagcagctcaaccgaatccgacgtccaagaaaccgccgctgtcgccgtcgccgacccctccccgcggtcggaggtcgtcgacggcgagagcccgccgcagccgggcggcgaggcggcgagccatcagcagcagcagaaggagatgaagctgaagaagccggacaagatcctgccatgcccgcggtgcagcagcatggacaccaagttctgctacttcaacaactacaacgtcaaccagcctcgccacttctgcaagcactgccagcgctactggaccgccggcggcgccatgcgcaacgtccccgtcggcgccggccgccgcaagaacaagaacgccaccgccgccgcccacttcctccaccgcgtccgcgcctgcgccgccgccgccgccatgcccgcggcgccccacgacgccaccaacgccaccgtgctcagcttcggcggcggcggaggcggacacgacgcgccgccggtcaccctggacctcgccgacaagatgacgcgcctcggcaaggaggggctcgtcgcccatgcccggaacgccgacgccgccgccgcgtgcagcgaggtgtcgagcaacagggacgacgagcagatcggcaacactgtagcaaaacctgcaaacgggttgcagcagcatcctcctcctcctcatcatcatcatcattcagccatgaacggtggcggcatctggccctactacacctcggggatcgcgatcccgatatacccggcggcgccggcgtactggggctgcatgattccacctcctggagcttggagcctcccatggccggccacagtccagtctcaggccatctcatcatcatcaccacctacaagtgctacaccttcagtctcctccttcacactaggcaagcatcccagagagggtggtgatcatgaggcaagagatcaccatggcaatggtaaagtgtgggtgccgaagacgatccggatcgacaacgccgacgaggttgcccggagctcaatccggtcactcttcgccttcagaggcggcgacaaggcggatgataacaacgacgacgatggcaccggcgtgcacaagctcgccaccacggtgttcgagccaaagagggacagcaagacggcgaaacatccggcgatcacgagcttgccgctcttgcacaccaaccccgtcgcgcttacccgatccgcgaccttccaggagggatcttgaaggccatcttgcaagatttttttttttttgccttcatcctctctgctgcttctgaactgaacacgaagttagtagcctgacagtgctgatttttttgtgaatcagacagagtatttgtatactaggggtatttgggggaagtgtatgacatagctacttgtggagatatagttgtaaccataggtagcatgtaaatactatttagaaaatagctgtttaaatggatatagctagtatttgggtttggagccaggagataagtaaggcccctggttttgtagataaataagaatcaattagatggaatatatggcttgaggtatttcatttcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0406300, RefSeq:Os10g0406300