Os10g0411500

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Revision as of 08:37, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0411500| Description = IQ calmodulin-binding region domain containing protein| Version = NM_001071117.1 GI:115481977 GeneID:4348605| Length...")
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Gene Name

Os10g0411500

Description

IQ calmodulin-binding region domain containing protein

Version

NM_001071117.1 GI:115481977 GeneID:4348605

Length

3919 bp

Definition

Oryza sativa Japonica Group Os10g0411500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:14676842..14680760

Sequence Coding Region

14677510..14678000,14678130..14678244,14678473..14678538,14678628..14678716,14678810..14678900
,14679019..14679165,14679282..14679374,14679452..14679553,14679664..14680419

Expression

GEO Profiles:Os10g0411500

Genome Context

<gbrowseImage1> name=NC_008403:14676842..14680760 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:14676842..14680760 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggctgtcaatctcatacccaccagacgactacctgccagcaatggaggacaacatgggcaggctgttcatccggtccctcagcttcgacgacgacatggaggccgccgccgatgactcgccgtcgacatcaccgatgccatcaccgtcggcgacattgctgccggcattcggctccggggggaagctgatcatagagggctccctgagcttcaagagaagagaggctgacccggttcagatggagaccatgatatccatcaggagtcccaagtctgacaaggagagctgcagcagcaagccaaatgctactgctggtgcatcgagatttgcgcttgccggagaccagacaccggaggattctccggtgatcgccggagttgccagccccaagcaccaggcagcggctgtcaggctgcagaaggtgtacaagagcttcaggacaagaaggcagctcgcagattgcgccgttcttgtcgagcagagctggtggaaattgctcgatttcgcactgctcaagcggaattcggtgtcgttcttcgacattgagaagcccgaaacggccatctcgagatggtctcgggcaagaatgagggctgccaaggttggcaaaggtctgtccaaagatgagaaggcccagaaacttgctctacagcattggcttgaggcgatcgatcctcgacatcggtatgggcacaatctgcactactactaccaccgttggctccattgtgagatcaaccagccattcttctactggttggatgttggtgaagggaaagatgtcaacttggaagagcattgccctagatggaagctgcataagcaatgcatcaagtaccttggccctaaagagagggaatcctatgaagtgatcgtcgaggattcgaggctgatatacaaactgagccgtcagatcgtcaacacgaccaaaagccgaaagggctcaaaatggatctttgtgctgagcacatgcaagactctgtatattggtcagaaacagaagggcacattccagcactccagcttccttgcagggggagctacatcagctgcagggagactgattgtagaggatggaattttgaaggcagtctggcctcacagtgggcattaccggccaacagagcagaactttcaggagttcatgaatttcctgaaggagagaaatgtggatctgactgatgttatgttgaacccttcggaaggtgaagatgatgccgaattcagcctcaagagcagccattctaggcaggacttgaccgaactctgtgaacctgacatgcaagaacatgaggaacaagtcacacaacaccatggcgctgacgaaaccaagaccagcagtgatgcacccaccatgacatccaccgaaaccatggcgagcacaccggcaatcaggaaatccacctcagccaacaagctgcaagggaagcggcctccgaggctgctgatcagttccaacaacacagaactacccgcaacacattgcaacggaaggccatcaccggttcacaaggacatcgacgaggattccaccatgttcggagagtgcctcgccttctgcaagaagaacctgtttgcagaggaaggcaatgaagaagatgagctggtggaagtaccagaggagatgatcatgaaccgtatcaactgcaagaaggccacgaagtcataccagctggggaagcaactgtccttccaatggagcactggagcaggtcctcggatcgggtgcgttcgcgactacccatcggagctccagttccgagcattggaggaggtcagcctgtcaccccggggaactaggtcgacgaggttttcgtcgccgaggcgaaagcccttgacaccaaatagcattccagttgcaagatttggttgtagccctacagcccaaggtgacaacatggggctgaagccaaggcagaggtgtgctacttggactgctttctaa</cdnaseq>

Protein Sequence

<aaseq>MGLSISYPPDDYLPAMEDNMGRLFIRSLSFDDDMEAAADDSPST SPMPSPSATLLPAFGSGGKLIIEGSLSFKRREADPVQMETMISIRSPKSDKESCSSKP NATAGASRFALAGDQTPEDSPVIAGVASPKHQAAAVRLQKVYKSFRTRRQLADCAVLV EQSWWKLLDFALLKRNSVSFFDIEKPETAISRWSRARMRAAKVGKGLSKDEKAQKLAL QHWLEAIDPRHRYGHNLHYYYHRWLHCEINQPFFYWLDVGEGKDVNLEEHCPRWKLHK QCIKYLGPKERESYEVIVEDSRLIYKLSRQIVNTTKSRKGSKWIFVLSTCKTLYIGQK QKGTFQHSSFLAGGATSAAGRLIVEDGILKAVWPHSGHYRPTEQNFQEFMNFLKERNV DLTDVMLNPSEGEDDAEFSLKSSHSRQDLTELCEPDMQEHEEQVTQHHGADETKTSSD APTMTSTETMASTPAIRKSTSANKLQGKRPPRLLISSNNTELPATHCNGRPSPVHKDI DEDSTMFGECLAFCKKNLFAEEGNEEDELVEVPEEMIMNRINCKKATKSYQLGKQLSF QWSTGAGPRIGCVRDYPSELQFRALEEVSLSPRGTRSTRFSSPRRKPLTPNSIPVARF GCSPTAQGDNMGLKPRQRCATWTAF</aaseq>

Gene Sequence

<dnaseqindica>669..1159#1289..1403#1632..1697#1787..1875#1969..2059#2178..2324#2441..2533#2611..2712#2823..3578#ctgctcctgaatctcctcctattgcccttctgtctcacatccctgtctcataattaaagtcataattaaggagcttctctaaggtgattgggacttgttgcagggatcaggaggaaaacaacaaggtagagctctctgttcttgattcttgttgtcttttgtttttctgttcatatgttgtgcagattataacattctatatgttgagggggaaaaaagaagggaaagagatgattggtgcattttgggaacaggtttggtgctttcatgaagaaacaagaaattggatgtgtgaatgtgttcttgcttagtttttttatgctctctttcccttgattttcttcagttcttgcatgattgcatcttgttatgttgctcatttgtcctatcatgggatgttttcttgaacaaatatatactatcaagaaagaatgaaaaggtgttcttcaaaaaaaaaatgaatgaacaaggaacatgaaatttgttctgaaaatgtcaaattctttccctggaacttacatttgatgcccattaaaaattagctttgatctgcacaggataacttaaattttggattaacaacaagaggaagtggatcaaccagacaagaggaaaacgtgcaaacaagacaggcttgcaacatcaccttgagtccaaagccaagaaagatggggctgtcaatctcatacccaccagacgactacctgccagcaatggaggacaacatgggcaggctgttcatccggtccctcagcttcgacgacgacatggaggccgccgccgatgactcgccgtcgacatcaccgatgccatcaccgtcggcgacattgctgccggcattcggctccggggggaagctgatcatagagggctccctgagcttcaagagaagagaggctgacccggttcagatggagaccatgatatccatcaggagtcccaagtctgacaaggagagctgcagcagcaagccaaatgctactgctggtgcatcgagatttgcgcttgccggagaccagacaccggaggattctccggtgatcgccggagttgccagccccaagcaccaggcagcggctgtcaggctgcagaaggtgtacaagagcttcaggacaagaaggcagctcgcagattgcgccgttcttgtcgagcagagctggtatgattctcatgcaaaatgcaaatatttgtgcatttttgtcgtagaatattactagcggagatcaccgtaaaagtattctttgtcttttgggtcatagtgtttgaattgtttgatgcttgaattcaggtggaaattgctcgatttcgcactgctcaagcggaattcggtgtcgttcttcgacattgagaagcccgaaacggccatctcgagatggtctcgggcaagaatgagggctgccaaggtagagttcattggcatcatcccttatccaccaccctatgtctcactgacatgtgggcctataaccctggacccacctcgtcggtgagacgaggtgggggatttgcaaaatcagtggcataggagggattaatctctgaactttttaacagagccaccattgttctttcagtaagcatggaatttatactgcattactgacataggtgtagtgttgctatcaccttaggttggcaaaggtctgtccaaagatgagaaggcccagaaacttgctctacagcattggcttgaggcggtacatgcttcaaacattgatctcaacagtattttcatgattgaaatgtgcaatgaaaactgagatttcatctcatgtctgattatcagatcgatcctcgacatcggtatgggcacaatctgcactactactaccaccgttggctccattgtgagatcaaccagccattcttctactggtgcgaatgcgcgaatctccgaagaccgtttcacatctccgaacccagttgacagacaaggcttactgacaaatatgtgattctgaaacacaggttggatgttggtgaagggaaagatgtcaacttggaagagcattgccctagatggaagctgcataagcaatgcatcaagtaccttggccctgtaagttccatcactattcttctgatctgaaaatctgaaccaaccatttagaaactgctcagttgtagaaattgcatctgattaacagcatatgtttgttcttgttctgggattgtagaaagagagggaatcctatgaagtgatcgtcgaggattcgaggctgatatacaaactgagccgtcagatcgtcaacacgaccaaaagccgaaagggctcaaaatggatctttgtgctgagcacatgcaagactctgtatattggtcaggtagatgactactctgcatccatggcacttcttcattggcaaattgctgctacatcttttcatcttgcaaacattctgggaactgatgagatgctggtttttcaacacgattacagaaacagaagggcacattccagcactccagcttccttgcagggggagctacatcagctgcagggagactgattgtagaggatggaattttgaaggtatgttggggatgtgtcgatttctacgagcaacactggatttgctctctctgactcttgaaatttgtttgtttcaggcagtctggcctcacagtgggcattaccggccaacagagcagaactttcaggagttcatgaatttcctgaaggagagaaatgtggatctgactgatgttatggtgagaaccgaagtgtgaataatatcacaattcatctgcaggaaattatagatactgaatagagttttcctttgaactgattggtgtgccgtgtttcggttttgctacagttgaacccttcggaaggtgaagatgatgccgaattcagcctcaagagcagccattctaggcaggacttgaccgaactctgtgaacctgacatgcaagaacatgaggaacaagtcacacaacaccatggcgctgacgaaaccaagaccagcagtgatgcacccaccatgacatccaccgaaaccatggcgagcacaccggcaatcaggaaatccacctcagccaacaagctgcaagggaagcggcctccgaggctgctgatcagttccaacaacacagaactacccgcaacacattgcaacggaaggccatcaccggttcacaaggacatcgacgaggattccaccatgttcggagagtgcctcgccttctgcaagaagaacctgtttgcagaggaaggcaatgaagaagatgagctggtggaagtaccagaggagatgatcatgaaccgtatcaactgcaagaaggccacgaagtcataccagctggggaagcaactgtccttccaatggagcactggagcaggtcctcggatcgggtgcgttcgcgactacccatcggagctccagttccgagcattggaggaggtcagcctgtcaccccggggaactaggtcgacgaggttttcgtcgccgaggcgaaagcccttgacaccaaatagcattccagttgcaagatttggttgtagccctacagcccaaggtgacaacatggggctgaagccaaggcagaggtgtgctacttggactgctttctaatgttgatatggcatgcaaattgcaaaggcaatgctgcttttcttctccttaactggaggacgatgcaaagtgtatagtgagtgagggaaacatgagaatgtcattctttggttttgtagatgtgtagagcaaacacaccatggcttccaaggaacaagcaataagatgtaccttccgaagaagtaataacaagtaataagatgtatttttagatatgacacatttgacactcgcaaggtgcaagcaaaaatagagattacaggttttcagggaggaaaagaaacagatgccagaatttgtaccacaaaagatgatcaagctaaggaatttgatgtctccaa</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0411500, RefSeq:Os10g0411500