Os10g0414700

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Revision as of 08:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0414700| Description = KH domain containing protein| Version = NM_001071131.1 GI:115482005 GeneID:4348619| Length = 5989 bp| Definition = ...")
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Gene Name

Os10g0414700

Description

KH domain containing protein

Version

NM_001071131.1 GI:115482005 GeneID:4348619

Length

5989 bp

Definition

Oryza sativa Japonica Group Os10g0414700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:14844534..14850522

Sequence Coding Region

14845363..14845677,14846225..14846456,14848019..14848170,14848280..14848987,14849131..14849322
,14849971..14850132

Expression

GEO Profiles:Os10g0414700

Genome Context

<gbrowseImage1> name=NC_008403:14844534..14850522 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:14844534..14850522 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaattcatattgtgataagaaagaggttactgtagcttttagcaaaactaaaaggcaagaggaggatgaagtgatttggagaatggtagaacaaggcgctacagatgatgaagagtgtggtggtaccaactgttcggctggcgaaaatagggatcctggttggcctggaacgagtgtcttcaggatgctgattcctgcaactaaagttggcgcagtaattggtcacagtggagaaaggcttagaagactgtgtgaggaaacaaaagcctgcgtccgagtaataggtggccactttgctgctgcagagcgagctgtaatcatttttgcaaaggaacaacctgatgagccaaaacctccagctattgatgcactactaagagtatatgagtgtataatcaatgatgatggtttagatgtgagatataacaatatagttgtggcacggattcttacaccaagtgaacaggcagcaagccttattggcgatcagggttcagtgattaattatatcaagaaagcttctaaaaccaacatccatgttattgacggtgacttgccacctgttgcacttgaagatgatatgattattgaaatttggggactgcctgcaagagtgcatcaagcattggaacttgttgcttgtcatttgagaaagtacctggttcatcgaagtgtcatcccactgtttgacccccatgtgtctattccaatctcacctgtggatatgcccccattccactacagtgaccatcatgagggccttctgcacgaagctagtccaggctattactccctatatgctgaagcttttcaacttgaacacccatggactgatactagttattcaaggtatccaatggaaaactttacacatgctgacatatttgaatacagacaagaagcaccagtattttttgggagatatcggtcagtcacacctccacattatgggcatgaagcagaagcatatttatcatctccaatggaattatgtttgcataacaacctgaatacatatggatggcaagcaactccaccaattggtcgatcagatactgttgaaagaatacgctcccttatatctgtgtatggaaaacaggcacatccacatccgctgaggcagacatatcaatcaactaaaatggaaaaacatccacactcggggatatctttgtacagaagggatgatcatccaacaagggtatctccatcacctgctactgaactacccccatctcctgctgtttctgcatataaatggcaagtatctccatccttaaagatgtatccttcaactaatgtcgaaaaccttcaacactgccgtgtttctgcatgcgctccagaagaactgccaaatgtggttgtgccttcgttaactagtcaatctcctgcagtcacttctcaggttataatgaagatgcaagttccaattttctatgctgaagcggtaattggcccaactggtgcacgaattgattacattcgccaagccagcggatcaagcgtcgtgataaaggatcttgatgacagtgcaatgtctattgagatcactggaagtgctgcaacagatgttcaaattgcagagcagttgataaagaacttcatggctgaagctgctgccgcttcccctgatcacagttatgacttcattccatcacatttgccagcaccgagatctccagagccagatattccaactacttcactcactcgcagagcaagctgttttacagaacctcgcctgcaagcgacctactga</cdnaseq>

Protein Sequence

<aaseq>MNSYCDKKEVTVAFSKTKRQEEDEVIWRMVEQGATDDEECGGTN CSAGENRDPGWPGTSVFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAA ERAVIIFAKEQPDEPKPPAIDALLRVYECIINDDGLDVRYNNIVVARILTPSEQAASL IGDQGSVINYIKKASKTNIHVIDGDLPPVALEDDMIIEIWGLPARVHQALELVACHLR KYLVHRSVIPLFDPHVSIPISPVDMPPFHYSDHHEGLLHEASPGYYSLYAEAFQLEHP WTDTSYSRYPMENFTHADIFEYRQEAPVFFGRYRSVTPPHYGHEAEAYLSSPMELCLH NNLNTYGWQATPPIGRSDTVERIRSLISVYGKQAHPHPLRQTYQSTKMEKHPHSGISL YRRDDHPTRVSPSPATELPPSPAVSAYKWQVSPSLKMYPSTNVENLQHCRVSACAPEE LPNVVVPSLTSQSPAVTSQVIMKMQVPIFYAEAVIGPTGARIDYIRQASGSSVVIKDL DDSAMSIEITGSAATDVQIAEQLIKNFMAEAAAASPDHSYDFIPSHLPAPRSPEPDIP TTSLTRRASCFTEPRLQATY</aaseq>

Gene Sequence

<dnaseqindica>830..1144#1692..1923#3486..3637#3747..4454#4598..4789#5438..5599#aaaaccccactctccttgctccgcccccgccgcgtcgccgtcgccattgcgccgccgccgccgccgccgccgacgccgtgcgtcgcgaaggtgatctccgcgtccctagctctctccccctcctcctcctcctcctctctctctctctcctaccttttctccgctcgcgcgcatgcaagcgatgcggcagcagcggcggcggccgtgctccggtgccgcgcggggcggggatcgccggccccatttctgctgggtttggcggggttggggacttacttgggtatcgagctgggaggtgtacggcttgttggtctaatccatggggttatatgtgtcgctctgagttcttaaggcactaaagggggttggttcgttttattcattttttttttgtttgcttgtttgtatgctttgatgcgtcggcgtcgctatagcgagttgttctccgttggtgaccgtgttgggcttggttcgagttttcgtttcgggcaatgcgcaatgatgctacttggtagtacttgggagcagagctgtaccaggggctaagctgatcaggttgttctttgctacgattgagcttcagattacacagttcctttgtttgtgggactgttaggatcccggtgattgaggcttgttatactgcgtctgtgtgcaagccttgattgagctcttgatttgagtcgctcactgcggggttgatattcgatgggattttgccaggaaattttacttggttccatcattaaattgtaggaatgtcactattcagattgttctcattactatttatccttttcgatgattcagtgctaccaggaatgctgggatgaattcatattgtgataagaaagaggttactgtagcttttagcaaaactaaaaggcaagaggaggatgaagtgatttggagaatggtagaacaaggcgctacagatgatgaagagtgtggtggtaccaactgttcggctggcgaaaatagggatcctggttggcctggaacgagtgtcttcaggatgctgattcctgcaactaaagttggcgcagtaattggtcacagtggagaaaggcttagaagactgtgtgaggaaacaaaagcctgcgtccgagtaataggtggccactttgctgctgcagagcgagctgtaagttctccatttagtagtattattttttttcttgatcatccttgacttcccattactatttatactagaatactgtttccttttctgcctgcagtatgctagcatttttttttctttttggcaatgatgatcttaattgagtgcttgcaattaaattttatagcatttggccacaaacaatactgcggggtttctttcagagaaatgtatgaatgattcatgatctggctaacgtatcaagtatcaactagcaaaccagaagtggactatagaatgtacttatcctggatgcagatggtttttctttgcttttagaatgttgtcctgttacgatgttgtgttgacttccaatcgcttttgtggtaactgaaatataacctcctatattgtttttttttgtctttgtactttggattcttatataagttggtctttttcaacataatttttgcaatagcttgtgattcataaaaatatgggcatcatttatgtttagttcaataatttcctcaattttgtttctttcaattttttttattggaaggtaatcatttttgcaaaggaacaacctgatgagccaaaacctccagctattgatgcactactaagagtatatgagtgtataatcaatgatgatggtttagatgtgagatataacaatatagttgtggcacggattcttacaccaagtgaacaggcagcaagccttattggcgatcagggttcagtgattaattatatcaagaaagcttctaaaaccaacatccatgttattggtaactttcttactttgatgcacctcttggaaccactagttccttctattgataaatttgatatcagtggtctccaactctccatatatacagatgcgggtctttggatgatgcactagtgtatctataagctacatgaatttcagcttactgaagcacatggttactcatgttgcttggtgactctactgcattgaaactaaatttcttaagcatgcagtgatgttttagccccatcaaggaattaaatggactactacatcagcatattctgtcaaacatgtttttgctggttaattataagctgagattgtacctgtgaaaaaatatgttcatgcaggaatagttaatattgcgtgtagctatgtacatgttgtcaggtgtccatattttcttatgtgttaagaaagtatttgttatggccagtgttccgtacttatgcggcccgtccaacatgacatccgttgaaagcggaccactggcgagagataattagtggattagatatccctacttgctatctttgtctatgtttccattccattagattgtttgtttcctttttcattagagattcttgttagggaccatcctataaaaggatcaaccatattattttaagaattaattgatctttctctttcttttgtcactcacttaaatagttacagagcaagcagagaagttaatatacataatgaactaggacttggttacacttaaaggattctgatatggcatgaaaattatgtgactaattaacttatttctttgaatttatcaagcaatatcaacaataacacaatgattgcccatggatgcaatgaaaagaaacagttttaagcatgacttcatccatggcggatggagcagggggcgcgaaggtggggaccccgggcctagtgctttcagcccatcatgcctgctatgtattcacggtcaaattatctagtaaccaagcaatggccacggcattgcaacatacagagtagcattttagttgatccgttgattattattttgcatttatcgttcatctattactagattcataaatatggctaaactaaattacatagtttttctcaagtgatattagcaatatttcccgcacaaatggcagtatgaaacaacaaataaaatcttggagggattttaatctcattgatgccatggtgatctggtaaaacatatgcaaaccatccttctgaatcctatttttttattagtgttgttccacggccccttcctcgcctctaaattttagctctgcgtttgacactgacttcatcaaaactacaaaatgcaacatctgtttaatgcgatgacgcatgggtttcattgcatccatcatttggataaaatgggttgcacttttattttaaattcaaaagtttcagttatgattgacctaaatggtattatattagttccatttggtgatatgcagtttcagtatctaatactactttcaagattaaactgctattatttggtacactttccagccttctatatataatcttaataagtactcattccatcatgtcttgactatgtagacggtgacttgccacctgttgcacttgaagatgatatgattattgaaatttggggactgcctgcaagagtgcatcaagcattggaacttgttgcttgtcatttgagaaagtacctggttcatcgaagtgtcatcccactgtttgacccccatgtaagttgccactattttgaacatttgttatttaatgagcaattgagcataccgacacagtacatttttgtcctcgcaacatttaattctgaggaatgattttcttcaggtgtctattccaatctcacctgtggatatgcccccattccactacagtgaccatcatgagggccttctgcacgaagctagtccaggctattactccctatatgctgaagcttttcaacttgaacacccatggactgatactagttattcaaggtatccaatggaaaactttacacatgctgacatatttgaatacagacaagaagcaccagtattttttgggagatatcggtcagtcacacctccacattatgggcatgaagcagaagcatatttatcatctccaatggaattatgtttgcataacaacctgaatacatatggatggcaagcaactccaccaattggtcgatcagatactgttgaaagaatacgctcccttatatctgtgtatggaaaacaggcacatccacatccgctgaggcagacatatcaatcaactaaaatggaaaaacatccacactcggggatatctttgtacagaagggatgatcatccaacaagggtatctccatcacctgctactgaactacccccatctcctgctgtttctgcatataaatggcaagtatctccatccttaaagatgtatccttcaactaatgtcgaaaaccttcaacactgccgtgtttctgcatgcgctccagaagaactgccaaatgtggttgtgccttcgttaactagtcaatctcctgcagtcacttctcaggtttgtatggtttttatcatagactcttgctgacttgttttaattagtcctgtcaacattatttacttcttgtttgctgacatgtttttattgtctgcgcaacactatttactatcatttttggacggtgggctgcttggcaggttataatgaagatgcaagttccaattttctatgctgaagcggtaattggcccaactggtgcacgaattgattacattcgccaagccagcggatcaagcgtcgtgataaaggatcttgatgacagtgcaatgtctattgagatcactggaagtgctgcaacagatgttcaaattgcagagcagttgataaaggtagcagcagcttttataattttgttgttgttgttgtacttacttctgatgaaatgactagtctaagtaagttcattgcatttctgttgacataactggtctttacttttagacaaggttctatttctgttttatgaaaaacacaacatgactgcaatcctctcttttgtgggtattgcttccatttattgtaggcaaaattggttctagagtagccaatttttcctttattgtaaatatagttcaatatctagttttcaatcttattttacctactggacagctaattaattgtataagattccatgtttccgcaaacagaccacatattgctattcatctaatgctcgctagcccagtccttgtatggaaaatcagggtgctggttgctgtcctggtgtatcaggttctagactcttcgttgatatgcatgaactttgacctgaatagcagctcagtacccttgaaagttcaaccacttgctaccgggactgctttttgctttttggaattgcaccttggtttctgtagttttaccactattgtgctgagagcctgaggctgtaagatgaattccacgcttgtacgtttgccttaaaaatatcaatgttgccctaccactctcctgaccatcgttttcttttccagaacttcatggctgaagctgctgccgcttcccctgatcacagttatgacttcattccatcacatttgccagcaccgagatctccagagccagatattccaactacttcactcactcgcagagcaagctgttttacagaacctcgcctgcaagcgacctactgagttcccaagagttctctttctgcacatagtccctacaccggcaatacaggaaatccgcgagagtacattcccagaaagttttgatatccatcctcagatgattaatatgcgccccctttttgaacccccaagacttgtatctaatattttctttttctttggcttttagccatagactttgatccatgagttagaaattgactctgatccatgagttagaaatagaccttgatccatgggttagaagtctgagattatggtataggacaacaattttttggtggattcagggtaagtgatgtacaagatatgtgccctcagatgtttgagagacagtttgtattacatgacaacatgcattatgttatctacaaactaaaattcactttt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0414700, RefSeq:Os10g0414700