Os10g0416100

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Revision as of 08:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0416100| Description = Class III chitinase RCB4 (EC 3.2.1.14)| Version = NM_001071140.1 GI:115482023 GeneID:4348631| Length = 1210 bp| Def...")
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Gene Name

Os10g0416100

Description

Class III chitinase RCB4 (EC 3.2.1.14)

Version

NM_001071140.1 GI:115482023 GeneID:4348631

Length

1210 bp

Definition

Oryza sativa Japonica Group Os10g0416100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15016170..15017379

Sequence Coding Region

15016222..15017145

Expression

GEO Profiles:Os10g0416100

Genome Context

<gbrowseImage1> name=NC_008403:15016170..15017379 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:15016170..15017379 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctccgccaagctcattgctgtagtcctcctcccggcccttctggccttccaagctccaatggccacggcagtaaactccaacctcttccgggactacatcggcgccatcttcaacggcgtgaagttcaccgacgtgccaatcaatccgaaagtccggttcgacttcatcctcgccttcatcatcgactacaccaccgagacgaacccgccgaccccgaccaacggcaagttcaacatcttctggcagaacacggtgctcaccccgtcggccgtcgcgtcgatcaagcagagcaaccccaacgtgagggtggccgtcagcatgggcggcgccaccgtgaacgaccgcccggtcttcttcaacatcacctccgtcgactcgtgggtaaacaacgctgtcgagtccctcaccggcatcatccaggacaacaacctggacggcatcgacatcgactacgagcagttccaggtcgacccggacaccttcaccgagtgcgtcggccgcctcatcacggtgctcaaggccaagggggtgatcaagttcgcctccatcgcgcccttcggcaacgccgaggtccagcgccattacatggcgctgtgggccaagtacggcgccgtgatcgactacatcaacttccagttctacgcctacggcgccagcacgacggaggcgcagtacgtcgacttcttcaaccagcagatcgtcaactaccccggagggaacatccttgcgagcttcacgacggcggcgacgacgacctcggtgcccgtcgagacggcgctgagcgcttgccggactctgcagaaggaggggaagctgtacggcatcttcatctgggctgctgatcattccaggagccaagggttcaagtatgagacagaatcgcaagcacttctggctaatgccaccatcagttactag</cdnaseq>

Protein Sequence

<aaseq>MGSAKLIAVVLLPALLAFQAPMATAVNSNLFRDYIGAIFNGVKF TDVPINPKVRFDFILAFIIDYTTETNPPTPTNGKFNIFWQNTVLTPSAVASIKQSNPN VRVAVSMGGATVNDRPVFFNITSVDSWVNNAVESLTGIIQDNNLDGIDIDYEQFQVDP DTFTECVGRLITVLKAKGVIKFASIAPFGNAEVQRHYMALWAKYGAVIDYINFQFYAY GASTTEAQYVDFFNQQIVNYPGGNILASFTTAATTTSVPVETALSACRTLQKEGKLYG IFIWAADHSRSQGFKYETESQALLANATISY</aaseq>

Gene Sequence

<dnaseqindica>53..976#agcgtcctcaaccaatcaattgcaagcaatttctccatcacagaagtcaccaatgggctccgccaagctcattgctgtagtcctcctcccggcccttctggccttccaagctccaatggccacggcagtaaactccaacctcttccgggactacatcggcgccatcttcaacggcgtgaagttcaccgacgtgccaatcaatccgaaagtccggttcgacttcatcctcgccttcatcatcgactacaccaccgagacgaacccgccgaccccgaccaacggcaagttcaacatcttctggcagaacacggtgctcaccccgtcggccgtcgcgtcgatcaagcagagcaaccccaacgtgagggtggccgtcagcatgggcggcgccaccgtgaacgaccgcccggtcttcttcaacatcacctccgtcgactcgtgggtaaacaacgctgtcgagtccctcaccggcatcatccaggacaacaacctggacggcatcgacatcgactacgagcagttccaggtcgacccggacaccttcaccgagtgcgtcggccgcctcatcacggtgctcaaggccaagggggtgatcaagttcgcctccatcgcgcccttcggcaacgccgaggtccagcgccattacatggcgctgtgggccaagtacggcgccgtgatcgactacatcaacttccagttctacgcctacggcgccagcacgacggaggcgcagtacgtcgacttcttcaaccagcagatcgtcaactaccccggagggaacatccttgcgagcttcacgacggcggcgacgacgacctcggtgcccgtcgagacggcgctgagcgcttgccggactctgcagaaggaggggaagctgtacggcatcttcatctgggctgctgatcattccaggagccaagggttcaagtatgagacagaatcgcaagcacttctggctaatgccaccatcagttactagctagtagctagttttgtttgctgcattattgtttcacatttttaaacaaagatcacaagagctgtactatgaaaataagcaactcaaatttgaaatacgaatttgaattagcatctagtatatatctagccgtgcatcattccagctggaatttaagataaaaccccaaccgtgttatacgtacagacatgcttatgttgtgtatgtcattattggattgttcctgttttgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0416100, RefSeq:Os10g0416100