Os10g0439600

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Gene Name

Os10g0439600

Description

Similar to RNA-binding region containing protein 2 (Coactivator of activating protein-1 and estrogen receptors) (Coactivator of AP-1 and ERs) (Transcription coactivator CAPER). Splice isoform 3

Version

NM_001189248.1 GI:297727626 GeneID:9269341

Length

7455 bp

Definition

Oryza sativa Japonica Group Os10g0439600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16237721..16245175

Sequence Coding Region

16237808..16238331,16239126..16239198,16239271..16239327,16239626..16239685

Expression

GEO Profiles:Os10g0439600

Genome Context

<gbrowseImage1> name=NC_008403:16237721..16245175 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:16237721..16245175 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagttcgacgagtacgagtacctagagaagacggtcgagccctccgcgccgtcgaccaacggctccggcgagaaggaccgcgccggctcccgccggcgctcctccggcggcggccgcgacgacgaggagcgcgggtcgaagcgctcacgctccggggaggaccgggaccgggaccgtgaccggcaccgaggcggcggcggcggccgggagcaccgggatcgggatgacgggaaggagaaggagaggagcagccgcagccgcggcaaggatgcggagaaggataggggcaaggatggggagaaggataggagcaaggaagcggagaaggataggagcagggacagggacagggacagggacagcgagagggacaggcgcagggagagggatagcgggagggaacgaagaagcagcagccgccctgagcgtcgccgcacggaggaggaggagatggtgagggagctccagaaggagcgcgaacgcagcgaccgcaaccgtgactaccgtgaccgcgatgttagacgtaggaaagatgacggtgcagagccagaagctgatccagaaagagatcaaaggactgtatttgccttccagctatctttgaaggcagatgaaagagacgtctatgagttcttctcaagagcagggaaggtccgtgatgttcgccttattatggacaggaactcgcggcgttccaaaggagttgggtga</cdnaseq>

Protein Sequence

<aaseq>MEFDEYEYLEKTVEPSAPSTNGSGEKDRAGSRRRSSGGGRDDEE RGSKRSRSGEDRDRDRDRHRGGGGGREHRDRDDGKEKERSSRSRGKDAEKDRGKDGEK DRSKEAEKDRSRDRDRDRDSERDRRRERDSGRERRSSSRPERRRTEEEEMVRELQKER ERSDRNRDYRDRDVRRRKDDGAEPEADPERDQRTVFAFQLSLKADERDVYEFFSRAGK VRDVRLIMDRNSRRSKGVG</aaseq>

Gene Sequence

<dnaseqindica>88..611#1406..1478#1551..1607#1906..1965#gatcgtcgagcgctccttctagggtttctgcttcttctcccccccaccaaatccaggtctccacgcgagtcgacgagcggcgccgccatggagttcgacgagtacgagtacctagagaagacggtcgagccctccgcgccgtcgaccaacggctccggcgagaaggaccgcgccggctcccgccggcgctcctccggcggcggccgcgacgacgaggagcgcgggtcgaagcgctcacgctccggggaggaccgggaccgggaccgtgaccggcaccgaggcggcggcggcggccgggagcaccgggatcgggatgacgggaaggagaaggagaggagcagccgcagccgcggcaaggatgcggagaaggataggggcaaggatggggagaaggataggagcaaggaagcggagaaggataggagcagggacagggacagggacagggacagcgagagggacaggcgcagggagagggatagcgggagggaacgaagaagcagcagccgccctgagcgtcgccgcacggaggaggaggagatggtgagggagctccagaaggagcgcgaacgcagcgaccgcaaccgtgactaccgtgaccgcgatgttaggtgagaatttctcaactccccaacctctctattgcaacacctctattgcaacatctggaatatctattgcaacacctggaatatgatagaatcgttgatgtgatttgctttagtagaaacccctaggcccttgtgtaatttaatggtttttatcgaattcctgtgaaatttatgtgtttcaataggggttttatcttgtgttagctatggattgcattatcaaatagttaatttttcttggggatacttaaagtgattaaagttgtgtgagatgggtataggatgttacttattgaatgcacgcaatttttttatcgaaaagttagtgattatgtgttgaatttggttttgcctgttctttgtgtacacatggaacatagcgatggttctatctctggtgatctgcatagcttctaaatgtctgatgtagcttactgtcattatatcatctaggtttgtcaaacttgaatattgaacatgaatgtgggactcgcagatacaattcgctagggcagtcttcagatggtcttggcaattggtcctgactaaggatatcaggtcatgaatcttcaatttttctttcttgtgatgcatttataagctagcaactgggcctggctgctagcctactacgttgagagatttttagataactgatttttttttgtgcttatcaagggtttctgataggcaatgattatgccatctgtaattttgatattttttattcatcatcctttgatgtgttgattatgctgcttttctcttttctcaagttccttttttatatgcagacgtaggaaagatgacggtgcagagccagaagctgatccagaaagagatcaaaggactgtatttgccttccaggttggtttcacaagtaacttttttatttttcttctttatgcattatgctaatgttcatcggcattactgtagctatctttgaaggcagatgaaagagacgtctatgagttcttctcaagagcagggaaggtgagaacatgtttacatcacactgctctgatttgaaactgttcccatcttacaatatttttatctatgtgcatagcattgatgaacaccgaaacttcaaatttatgacataggcttggactgattaattattttgttaatatagttacattacatatgagaaattgacagacattgtgtttttcacttgtttattattgactcatcacttgtgttgaaattatgtgattgttaagatttctggttgtattaaacttttatccaagcatctaatgattgctcttactcttctgtgaaggtccgtgatgttcgccttattatggacaggaactcgcggcgttccaaaggagttgggtgagttcttggtacctctttatttgctctgatgtacaattgtacattcctttcactggatgttttttctagaatgtacatgtgttctttgactttaacaattcgacttccagaatatgtgggctaaaattttgacccggccataggattgttgttagtcatggatgactccttgcttccataacacatgcaaaatactttgaacatagcaaatatgacattagaaaagacaataatcaaacagtttgagcacacaatatcaccaatttgtcgtttgatggaacttttggggagtatcaggagctttcgaataagcatgttacaatcgtgatgcatgttttcttgtaaaagctcagaagcatattgaagccaccagcagtggtagatacatgtttcacgcttaagtgtgctaatttggaacaagtgcacacttgcaaacaaatatcattacacaagcaacagtagcattgctatgtcaactaggattacccagatctatgcctgctcttggcaagagaaccataactcaaaaaaaaaaacaagtgtgcttcaatcaaaatctacttgtagcctgggcacgtgccagttcaacttccaaatggtatgccttgcttgagtatacattaaattgcaattttgtacacgctttgtctagtctggtttagcttattagagttaatgctataggataaatttggttactacgacaaatgtctcctgaaaagctttttatagacaatttattttgtttaaatttctctttggaaatctaattgattggtagtttttttttgttttgaatattacttatcagactctactacattttgttttttgatctatttctggttgtataattgcataaacacttatatagttcgtaattgattttttttcttggggaacatttttcatcagtttgtcatactcaacaggattgcacactgaaatatttataatttggtctacctgctgggattgtcgacagttacaagtaagatggaatattagatcattctgatgccgtcagcaatcttggacagtttgattccagattatttgacaaaacaattggtgcaggtttttaggaaataacgaggatgcccaagaacgaaatttaaaagtttgctgcacacaaaagtttaatccaaatttctaagtttctgcgagcttatgaaaaaaagactaacatatatgagactacttataaaatgtacttccttgacagtttttagttggatactctgatacgagtactaaagatctatataacatggcaggtacattgagttctatgatgctatgtctgttccaatggcgatagctctaactggtcaggtgcttcttgggcaacaagtgatggttaagccctcagaggctgaaaagaatctagttcagtcaaacgtggcatcaggtggaatagcttcaggtggagcaagaaagttgtatgttggcaacctacattccaatatcactgaggatcaattgagacaggtgaaccactgaatcttttagcacaaacagtgatacattgctttcccagtttgtagatgagaaaacatagtaaaataatgacaaaattgaattaatgtgcgtggtttcttttgtgtcattgctatctcatttaggtgtacgtggtttctttggttattcattttaatataggcacagcttaagtacttaatgtctaacttgcttataacactagtttgaaataacattgctgtgccactgaaaagtgatcctagagccattttgtcttcctcaaactggttgctgttccccaaattattcaccaaaattgtcctgaaataaataacttgtgataaagtacctcatgttgagaaaacaatcttctaaaattttcattcaattgctagttgcaacaagtttgcaatgtatgcaaattttgtttcttcttttcacctcgaataaaacaattctatgtaaataattgttggctctgagataaaaggtggtatttttgtcaaccaattgtacatgaagtattgaagtgggacttatttgaagttccttagtgaacaacagtagttggacgtcctgaatattaatattatcctttgagaaagatgctgctagattttgactttttgtctgaagtaccatagctgatgcttgtacacttttttaatgtgcatcttgttatatgtggtaatgaatactccatttcaggtattcgaaccatttgggcaagtggagcttgtccagctgccggtagatccactaaccgggctatgtaaaggtttcggtttcatccaggcaagtttccatatatgccttgaggctctgaacatctgaccatgaaaccctgtaatgctaattattttgttttgcagttcgcacggcttgaagatgcaaaagctgctcagagtttaaatggtcagcttgatattgctggaagagtaattaaggtaaatttcttaatatgtatatagtatagctcaaagatttggaacatgctaagaatccatctgacaagtatttgtttcaatcaggtctcggctgttactgagcaagctggtttgcaagttgggggtgcaactacgggagatttagatgatgatgaaggtggaggtttggtatgttttccaatcctttccacttctttcctcttgtacagtcttttgtaaatggatttatcatattttatagctcctttcttttgaaaatttgggagtatgcagagaatttttaactacaattttatggtttgggctcacacttgctaagtttattttacctaatacaaatatttccatggagttaaaaattgctcagagtttaaactgtctgcaattttatatcttttgctcatatattacactttacaccaaatagtacttgctctacaataggaatgggttagtgtggcaaaaatatagagctgagacggatgaggcattttgtggttaaaagtgttttatattgcacattctaccaaatgctaattctacaatgggtgtcgtgaaaaaaaaatatttattgagtaactctttcctggaagtattttttttttgttgtgcaatagctattctcatttcgacataaacagtaatttacatgaactatgtttttcttgatgtttatccttttgggaagtacaacattattaataattgtggcatggcatctttgcttttttatggaagtataactgtactaataacagcatggcatctttgcttaggttgtcaatatgtaccagttcagatcacttactgatattagtctcctagaatatgattgtgatgccccttctttgttctctgcttatacctaccagtgtttttgaaacaataacatgctaatatagtgatggtttaacttttaagtctcttcaaatgcttattttgagtttttgaccataggaaggtgggttgccagctgtatgtttaggttatcccttggtcactataattttgaggttgcagccacatctttttattgctgctaactgtgtactcattatgttgtatgggaaaaccaggaaatatgctgggctatacacatcacattttttatttgcgtattcatattttaattaaatatgtgcaggcattaaatgcaagctctagagctatgctgatgcgtaaattggaccggagtggcactgcaaccaggtatcttatttgttactacgcgcttttcctgcttttgctatccttgtgatatgttttttcatttttcatgaggggaccagctgctgtcttgattcatcttatcatgtctaaaactctatggggtatctgatttgaggaatgggttgatcctaaagctgatcttatgtgaactaagcccaatattttaaaattctgtgaaaaatgttgagtagattaggataaaaattgagacacgtgcagattgagatggtgagatcctagatctctctgctggagttatatgtgcaatcatgaatgttgaatcataaatgttgatacttgatagcacctactgccctatcggcaggattcatgtatagtagttttgtcaagaccattcttcatggtttaatggaaacattcttatttttgtagtactgttatacctcacattcattgaaaattccattcactgaatctcctttgataatttcttttgtgtttatctgcagcataactggtggtattggtattcctggtgtgaacacatctgttgagttaccgtctgcatcggttactggtgctcctctgccaaccacttcactcatacaaccaacaatacctgctattggaacagttcctggcatacaaattcctggtactcaatctgcagatattggttcacctactgagtttctattgctgaagaacatgtttgaccctgcagtggaggtatttatatatttatgttttagtttatcgctctgttccttcaatttagatggccactttacatttctttattgtatgattcaaaatgttatttgttttagtttcagttcatcaattgtatatgttcgcatctgaccgactaattgaatgttcatttttaacagacagatcctgattttgatttggatattaaagatgatgtccaggatgaatgctcaaagtttggtgcagtaaatcacatttttgttgacaagtaagtaactggtttactttttttggcgaatcttaatcgtattaggataagcataccatgtttatctttaacacctatgatttgactaatatgaccatttattttgcacaaatgctcacatgtcatccatgccacccaagggttcctgtaatcttgttagatttatcaatttactaagctttttgtgggctctgggctttctctaatatacttggaaggctgtctatagtttgtaaaggttcatttttattgcactaaaactgtggtagattcaatcactttgggtacaaatgggcaatgcctatcaacaagcctacagaatggttcatattgtgctggctgttcgtttccaacttggaatcgtctaaccttgtttttttaaaaaaagaaaatctaacatcggctattattgcacagaaatactgctggctttgtgtaccttcatttcgacagtgtagcagctgcgacagctgctcaacgcgcactgcatggtagatggttcgcaggaaagatgattacagcgacctttatggtaaggggataacatcatcctggtattgtttttgcatatcgtgttgcttattttgattgagatcttttctcttttcagactgctcagcagtacaaaatgaagttcccaaactagcagactagtgatgggtggcaaagatcgagttggcatacaagtgtgtgaggtgaatctggagccgttcagccgttcgatcaaattcgtaatagtggagcagctacattagttcgtttcctgtaacattatggcgtattggatgaatctcggtccgaatagttgcatcgtaatgatgactgaatatgtgatcaactgcttatcaccctttttgataggaactgttcccggtgacaaggcccttct</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0439600, RefSeq:Os10g0439600