Os10g0443200

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Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0443200| Description = Similar to translin-like protein [Oryza sativa (japonica cultivar-group)]| Version = NM_001071238.1 GI:115482219 Gene...")
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Gene Name

Os10g0443200

Description

Similar to translin-like protein [Oryza sativa (japonica cultivar-group)]

Version

NM_001071238.1 GI:115482219 GeneID:4348736

Length

3799 bp

Definition

Oryza sativa Japonica Group Os10g0443200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16403479..16407277

Sequence Coding Region

16403479..16403848,16403970..16404066,16404179..16404294,16404390..16404434,16404825..16404850
,16406677..16406812,16406986..16407080

Expression

GEO Profiles:Os10g0443200

Genome Context

<gbrowseImage1> name=NC_008403:16403479..16407277 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:16403479..16407277 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcagccaccgccaccgccgcgctccgactccgagccgccttcctctcccctcctcctcctcccgccgccgccgccgcctccgcagccgcagcttcgaggctcctccctcgccggcccaccgcctccatcctcctcctccccctgcgccgcctctgctccgtccctccccacgcggtaggcgacgccggcaccggaagcagctcccagccgtcgccggtgatggacgcgcagttcgagtccttccgcgcgcagctcgacgagtcctccacgctccgcgaccgcatccgcgccgtcgtctccgaggtcgagtccgcctcccgcgtcgcctccgccgcgctcctcctcgtgcaccagcccgtccccctcgcagatgtgctcgggaaggcgaaggcgcaggtggaggtgatcaaggggctctactcgcggctcgccgagatcctcaaggagtgcccgggccagtactacaggtaccacggcgattggaggagcgagacgcaggcggtggtgtcgatgctcgccttcatgcactggcttgagaccggcggcctcctcatgcacgccgaggcccaggagaagctaggattgagctccggggagtttggcctggatgttgaagattaccttactggattgtgcttcatgtccaacgatttcccgagatatgtagtgaaccgtgtcactgctggagactatgactgtccaagaaaggtgttgtcatttctgacagaccttcatgcttcatttaggatgctgaacctgcgcaatgactttctacgtaagaagtttgatgggatgaagtatgatttgaggagggtagaggaggtgtattatgatgtgaagattcgaggacttgtaccaggggagtccaaacaagaggcagcttag</cdnaseq>

Protein Sequence

<aaseq>AATATAALRLRAAFLSPPPPPAAAAASAAAASRLLPRRPTASIL LLPLRRLCSVPPHAVGDAGTGSSSQPSPVMDAQFESFRAQLDESSTLRDRIRAVVSEV ESASRVASAALLLVHQPVPLADVLGKAKAQVEVIKGLYSRLAEILKECPGQYYRYHGD WRSETQAVVSMLAFMHWLETGGLLMHAEAQEKLGLSSGEFGLDVEDYLTGLCFMSNDF PRYVVNRVTAGDYDCPRKVLSFLTDLHASFRMLNLRNDFLRKKFDGMKYDLRRVEEVY YDVKIRGLVPGESKQEAA</aaseq>

Gene Sequence

<dnaseqindica>1..370#492..588#701..816#912..956#1347..1372#3199..3334#3508..3602#gcagccaccgccaccgccgcgctccgactccgagccgccttcctctcccctcctcctcctcccgccgccgccgccgcctccgcagccgcagcttcgaggctcctccctcgccggcccaccgcctccatcctcctcctccccctgcgccgcctctgctccgtccctccccacgcggtaggcgacgccggcaccggaagcagctcccagccgtcgccggtgatggacgcgcagttcgagtccttccgcgcgcagctcgacgagtcctccacgctccgcgaccgcatccgcgccgtcgtctccgaggtcgagtccgcctcccgcgtcgcctccgccgcgctcctcctcgtgcaccagcccgtccccctcgcaggttgtttccacttcctcccccgcatttccccacacctcctactagattagggtttcgtcgctccctcgcgcttagcctcgttgctgattccggaagtgatttcctactctcgtgtgtgcagatgtgctcgggaaggcgaaggcgcaggtggaggtgatcaaggggctctactcgcggctcgccgagatcctcaaggagtgcccgggccagtactacaggtgacggattgcttccggctcctcctcctcctttcgcaggatgatgctggggggatagggtttttgtaggaattgctcaatgtgcttgtggggatttgcatttgctgcctaggtaccacggcgattggaggagcgagacgcaggcggtggtgtcgatgctcgccttcatgcactggcttgagaccggcggcctcctcatgcacgccgaggcccaggagaagctaggatgtatgccaggaccttgtgatggtggcgtggtgcacattgattgtgttttgtgtgtgatgaagctgaaaggtgttttctgtctctgttctttgcagtgagctccggggagtttggcctggatgttgaagattaccttactggttagttttcctttatgctatctgctattttaattgctttatgaattggatgttatttatgggatctactggtcattgttgttaaaatgtttttctcacgggctatataatgttggttagtggggaaaaatgggcctggactatacaggggaatagaaatggtggttagtcccttctttcgaattggaactagtggtgatctttatgcagataacatcatttagcatgttatcggcattgaaatttttgtgttgacaaaatgccaaaaatatcagaacctgcttttgtcaaaaaacgattttcgtctatatctgttacacttatgtttgttgaaacatgttgtggtcaaattacactgcctgctcacatgaagacttctttgctttgcaggattgtgcttcatgtccaacgatttcgtaagttcatcatcactatgcatatttttgcccacttccttacattgttcatatgattttatcttgcagtaacaggctaccttttcattagccatgtgtctggaaagaataataagcatgacttgtctgaagagtcccaaaggactggtgttataaaatattaattcatagtttcatatccgacatgtccttagagaatactgtatttgactttgccaagagcctgagattttcttagaactagaatgtaatatatataaagaacaatcaattgatatgtacaactttggatagcttgagtgcctattaccatatggtgctattcctttcatcctttggttgttgtatagctttagtacattttaagctggtcattgggtcttggcacttttttggttgataggtctctgttacccttttttgtgtagacaacatcagttctcgaaccatgtattaaccattaggtgactacttactacagttatactacctcatatatgaggtggtttttcatgtttagaaataattgcatgctgccctttctgtctcaatatgtgtgcttaacctgcaacctagaaagtaataaatatttatcttgacttaatgtgaaagttgaaaatgtagcatataatagcactggtgcagttgtgttagttcagattgatgaaaaattggtaactgggaaattaggactagctgttatgtgatcttgtgtaaactgtattctggcttcaaggatgattaaaatttaagtatcaatatcttttagaattttctggttggctgctagctcattatgtttgattatttaaaataaatattgatgtgagagttcttgacacttcagttcacaatcacaaattccagtgttccaccttagtatgtacagtaatagagcacattatggttgcaactttgttggtgcaaatggatattggtcatgaatttctattacattcattgactgcggacttaaagtttttgtgagacatgaggattccagcaagttaaatacaataaagtacgtagaatgtattcccctgatctgtttagatgaaattgatggttcagttttttgttgcctgtaaggcaaaaggatcagtgataggagtatgaatgttatgccaaatccataatttgtcaatctgatttgtatttttgattgaaatgcttcctaggtttgttggtttcgttctgtcaaatccttgtattctatcctagcatcatatgttacattctcatttccaatttctgtcatgtatttcatgctttaattgtactttgcacttgtgaaaatccttatattctatcctagcatcctatgtattcttctttccaatttctgtcatgtattcatgctttagttgtattctccaccgatttttcttgtttaatctgttaaaatgctactagttgacatcaagaggggaacaaatgactggaataaatatctcattttccttttgagacgataagcacctttttttttgcgagacaaaaacaggctatagcactacgcaagtacaacactaaatatttaaacttgatgaatgttgtggttatatgaacattcattttatgtgcctacaaactataaaatcctatctgaataaaaaaaattacacatgtagaatttgtactaacatttaaagttggtcagttgacccagaccgttgtactgtatgtgtacttgtgcgtgaccatgggtgtggcatgcatatctgtgaacttcacacgataatgtctgtttttttttaactgaatgttctattgttctgttacattttgattgatgtagtacataactgtaatgctattttgtgcagccgagatatgtagtgaaccgtgtcactgctggagactatgactgtccaagaaaggtgttgtcatttctgacagaccttcatgcttcatttaggatgctgaacctgcgcaatgactttctacgtaagaagtttgatggtgagtttcttgcaaaatctgtaatcgcgtaactggcaagtaatttttgggcatcacatgacaaattgcctcactcttggtatttacttaggagcattacttttatcacgattctccttgttaagttgggacatgtttgttttttttctcattttccgtactttgttttgcagggatgaagtatgatttgaggagggtagaggaggtgtattatgatgtgaagattcgaggacttgtaccaggggagtccaaacaagaggcagcttagcaaagactgtcgttcctcaccgagttgtttggatccgtcacgcgtttagcaagatccgtcacttgtctaaactgtgctagttcctgttggagtcatttggattcctctaatatcgactgggctggcctatgctgccaaatttacccgaacccttctagagtaggcatgtggcaaatatattcagatctgttctaatg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0443200, RefSeq:Os10g0443200