Os10g0445500

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Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0445500| Description = HR-like lesion-inducer family protein| Version = NM_001071245.1 GI:115482233 GeneID:4348744| Length = 4143 bp| Defi...")
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Gene Name

Os10g0445500

Description

HR-like lesion-inducer family protein

Version

NM_001071245.1 GI:115482233 GeneID:4348744

Length

4143 bp

Definition

Oryza sativa Japonica Group Os10g0445500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16549908..16554050

Sequence Coding Region

16549985..16550052,16551800..16551914,16552034..16552123,16553313..16553411,16553532..16553636

Expression

GEO Profiles:Os10g0445500

Genome Context

<gbrowseImage1> name=NC_008403:16549908..16554050 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:16549908..16554050 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcttcctgtccttcgccgggagggtcctcttcgccgccgccttcctcctctccgcctaccaagagtttagtgaatttggagttgatggtgggccggccgcaaaagctctccagccgaagttcaacactattgttgcaaatatttctacccgtactggattagtggtgcctcatattgaattaaagcatattgttgctgcaatgatttctttgaagggtcttggaggtctcctctttatcctcagcagttcattgggtgcttatctcttgttgtttcaccttgcttttattacacctgttgtccacgacttctacaactatgacattgagagtgcagagtttgtacagctcttcaccaagtttgcacagaattgcgcacttgttggggcgctcctcttcttccttgccatgaagaactccatccctaagaggcagcccaacaggaagaaggcccctaaaccaaagtcgacctaa</cdnaseq>

Protein Sequence

<aaseq>MGFLSFAGRVLFAAAFLLSAYQEFSEFGVDGGPAAKALQPKFNT IVANISTRTGLVVPHIELKHIVAAMISLKGLGGLLFILSSSLGAYLLLFHLAFITPVV HDFYNYDIESAEFVQLFTKFAQNCALVGALLFFLAMKNSIPKRQPNRKKAPKPKST</aaseq>

Gene Sequence

<dnaseqindica>78..145#1893..2007#2127..2216#3406..3504#3625..3729#actcctcccgccgccgcctccgcctgcctcggaagtcacgcccctcccgccgcagcggcagagagagagagagagagatgggcttcctgtccttcgccgggagggtcctcttcgccgccgccttcctcctctccgcctaccaagagtacgccctcctcctccctcccctccccctcccctctctgaagaactcaccgctcgccaacccagatctgcgtgcgccgcggcgcggaggagggcgtctggatctcgcggcccgtcgagctgcgcggttgagtggtggtggtgagggtggtttggatgttggatccggtgggtgggggcttttggttttgtcatgcggcgcgcggtcgtcgggatgctgatgctgggggggtttggttccgcgcaaatggatgaattgccgtcgcttttgctatgtggaatgtgtgctcgagcggagcagtgtttggtgaggtggtgccgtcagattgttatggaggagaatttgatttgtgcaagttggtggtgggtgtcggatgcttgaaatgtgcgcattttctagtgggctcttgtagattttttaaggaatctcggcttagctaagtttagtcgtatgtgaactgcaataatttgtcagtggatagcagtgcttcgttgtagtagtttcgctgtgcttccttctcagatgtgtacttgctcatccaccagattttgtttgggtgagattttttttttatgttcagatatggtgatagtttgattggaaactaggtagtaagattgtaccccgaaaaaaggagttcacatataataataggtactccaacttagaaaatgcactgaatcaaagtttttttttaaaaaaaaataataataagatgaatactaattgagtactagtatgtagttgagacttgagaacactccattttctggcccaagggagactgttgtggtggtaagtctggtgaactgactggaagaggttaaagagtgagtgttgggctaggaaaaatagatagttttgagtgggatttaggttgggaatggtggatggagtgccagggctgcagcatgtaatgcgcaagtaccagaggtacaggtgcaaggaggcagcgatggtagctacagagtccacactacacatccagctaaagatgtgccatataaatattttgtagtttatctcatgtttcctagttatctactccctccgtcccaaaataagtcaatcccgtactagtatatgacacttcctagtacgaggttggtttattttgggacggagagagtagatgacacctgatatgtaaaagtggcctaatattacattaggaagtatagcaatgaatagaccagagaggggcttcgaccaccaaaccctagtcgagcagagcccttgccaccatgggaaccagtccatgcgacataggggaaatctgccatcgactgagctccatcttcctcctctcctgtacactacataactgagtctcatattcaaagatgcaaaagagaaaacgaattcacttcaacaacaatacctattttatagccaacataatacattagctcttagtcttccattagaaagcagtgaccttatttctgaaccagatttgtcatccaaataacgcatggccatctgctagtgtaatagacatcatgatgaatatgtactgtttaaacacaggattctcgaaaattatcttttcaaactgacaaaaattggaaggcacctattgacctactctgatttgatatgagcttgctatagtttgtgctctatagtgaatcataaattacagtgccaagtacatccatgcattttgcttattttatgtctgaagaaaacatatgcactcaaccagtcaattccttatcattttacgtttttttgtcgattacaggtttagtgaatttggagttgatggtgggccggccgcaaaagctctccagccgaagttcaacactattgttgcaaatatttctacccgtactggattagtggtgcctcatattgaagtaataacttcatgtgttgatactgataatatgttttattctgtcacaaagtgttattgtggacatttcgtgaagtgatattattattcatagggtttcattattttttgtttttgcagttaaagcatattgttgctgcaatgatttctttgaagggtcttggaggtctcctctttatcctcagcagttcattgggtgcttatctcttggtatgatctcaactagaaaaataaaaataaaatattgttttgccttatactcttaaatggtcatatagtatatgtgcctatatttgtcattaccaaaatttggtcatcaaatgccttgaattgaccaaattttgtattcagcttgatgtccttgatctgcgccatctgtcttatggttacaaagtagaattattttctttctaaaaaatatggcggctcctttatcttgagaagatctaacatttgcttcccctcttccaccatggatgtcatgttttcttttcttttttgcactttgacatgccaaacagccgccgcaatactgtagttttctttaaggaaaccaacggtaccatactgataatttggctggtgcctttgtgttgtttttgtgctatatgtgatattgtgatgttcactcatgcatttattcctgctatgtgttacctcatagtactagttcagttatacatgcaatgcaaacacacagaaacttgtatggggtattttttttaaaatggaaatctagttgccgtttgttacatatatgttgtaaagatgctttgttttgagtaaaagcgttaggagcctacctgtaatatatgttgctaagcataattctgtagtaaacccaatcatactttttgctgctgctgcagtaatcagtcaatcccttcatgcttctgtgccaagtttttttatgaggtttgcaaaaaagtagaaacaattcagaacccttcccaggacgactataacaggagaactggagaagcttaatgcaaggattataggataatatggcttataatacaaggattatacaacaataagcaagtcgatgttgtgttatgaatctgactagatgtcatggcaagtcgagatgatagttttagtcatgtcactaaggattaggaatggaattatatgtaattgttttcacatgtttgtgtcagcatatatgatatggttgatatggcaaccttttgttaagaaaaggcaaaaaggtgtactgtgaatctcttttgtagtcttgtaagctgcacttaggttgatacggtttatgctttagttcattggtcttacactcttgtactgttgtgccaattcccatgagaacttattgggtgccttgtaagctgtgaaatatgtttccagatcacaacctaatgaagtaatcttctccttgcagttgtttcaccttgcttttattacacctgttgtccacgacttctacaactatgacattgagagtgcagagtttgtacagctcttcaccaagtttgcacaggtaactgcggaatgcatcaccttccaagtttttaagagctcgtgaatctcgagagttatatttgttgcgcaactgtaagtccaatggttttgactattttataatccactgtgaatgtagaattgcgcacttgttggggcgctcctcttcttccttgccatgaagaactccatccctaagaggcagcccaacaggaagaaggcccctaaaccaaagtcgacctaaagattctgaacgtctgaagctacattgtttgcctaattgctggtgccaggggatggctctcatctgggagaaactccacagctagcatttgaggatatggcatttgtgcttgtgcatgctttaattctgaaagcatcccttgatcctgacccatttttaccggattttttttaagggcgcctccctgattacattctaatgtctgattagacgaccagattgtaccaacatgtactcccttttggttcttgattcagtttcttaggaagcaatcgttatttatgtacactccattaatttgctgggaaacatcatcttcttggcacaatctttctgtgtgctttgtgtcatgtttagagttatattgacggcctggtgccaaatggcacattcagcatgcaattcaaagctatg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0445500, RefSeq:Os10g0445500