Os10g0456800

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Revision as of 08:40, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0456800| Description = Similar to PGPD14 protein| Version = NM_001071292.1 GI:115482327 GeneID:4348796| Length = 3528 bp| Definition = Ory...")
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Gene Name

Os10g0456800

Description

Similar to PGPD14 protein

Version

NM_001071292.1 GI:115482327 GeneID:4348796

Length

3528 bp

Definition

Oryza sativa Japonica Group Os10g0456800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17162178..17165705

Sequence Coding Region

17162514..17162657,17163017..17163128,17163211..17163302,17163431..17163513,17163639..17163679
,17163771..17163814,17163942..17164019,17164142..17164174,17165090..17165149
,17165290..17165377,17165533..17165558

Expression

GEO Profiles:Os10g0456800

Genome Context

<gbrowseImage1> name=NC_008403:17162178..17165705 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:17162178..17165705 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaattggagtcggagcagcacggctgcgagcattacacgaggggatgcaggatcagggcgccgtgctgcggcgaggtgttcggctgcaggcattgccacaacgaggccaagaattcgctcgagatccatctcaatgaccgtcacgagatcccccgccacgaaatcaagaaggttatctgctctctctgcgacaaagaacaggatgtacaacagtactgttctggttgtggggcatgcatggggaaatacttctgcgaaaaatgcaacttctttgatgatgatgtctcaaagaaccagtatcactgcgatggatgcggcatatgcagaactggtggtgtggataagttctttcactgcgacaaatgcgggtgttgctacagtaatgtcttgagggattctcatcactgtgtagaaggagcaatgcatcacaactgtcctgtctgcttcgagtacctatttgactcgacgaaggacatcagcgtcttgcactgcgggcacacgatccatctggaatgcctgaacgtgatgagagcgcatcatcacttcgcttgcccggtgtgctcacggtcggcctgcgacatgtcggacgcgtggaagaagctcgacgaggaggtggccgcgacgccgatgccggagttctaccagaagaagatgatatggatcctctgcaacgactgcggcgcgacgtcgaacgtgaacttccacgtcctggcgcagaagtgccccggatgcagctcctacaacacccgggagaccagaggctgcggccgccctgcagccgcgcgctccacggtttga</cdnaseq>

Protein Sequence

<aaseq>MELESEQHGCEHYTRGCRIRAPCCGEVFGCRHCHNEAKNSLEIH LNDRHEIPRHEIKKVICSLCDKEQDVQQYCSGCGACMGKYFCEKCNFFDDDVSKNQYH CDGCGICRTGGVDKFFHCDKCGCCYSNVLRDSHHCVEGAMHHNCPVCFEYLFDSTKDI SVLHCGHTIHLECLNVMRAHHHFACPVCSRSACDMSDAWKKLDEEVAATPMPEFYQKK MIWILCNDCGATSNVNFHVLAQKCPGCSSYNTRETRGCGRPAAARSTV</aaseq>

Gene Sequence

<dnaseqindica>3049..3192#2578..2689#2404..2495#2193..2275#2027..2067#1892..1935#1687..1764#1532..1564#557..616#329..416#148..173#ctccttccctcccgccgttgccaaccacccccttcccctcccccctcgccctcgccgccggcggccgtctcgtcgtcggtgagacctagagagccaaacagcgcgttggttgttgagctcggagagggagagagagagagagagaggatggaattggagtcggagcagcacgggtaagcaagaaagagggaatcgatcatgtggttggctgcgagatttttattaccctctgattcgagagctttggttctggaaatctcatctcacctgtgtttgtttgcttgggcttttttgttttttttttgttttttttttctggcgggtgaagctgcgagcattacacgaggggatgcaggatcagggcgccgtgctgcggcgaggtgttcggctgcaggcattgccacaacgaggccaaggttggatggattcttctctcttcttccaatccatttcgcttttgaattttgattctgtttttctttttttgttggctcctattgaggagaggaaaatcgttcaaacggtactgatattggcttttgattatttgctgcagaattcgctcgagatccatctcaatgaccgtcacgagatcccccgccacgaaatcaagaaggtgtttgtttgttctcactcttctgtttgattttagcatcagctttcccttttgttttcaattcgtgtaagctttgatgcttgtcatacccaatttcatccgatataatccgtgtcaaatttatctgaattttgcttggacacacaacgcctgatagacaaaaaagaaaagaaaaaaatctgcggtcaatatttgatggcgtgtcgccggagagatcatacctcagttttcacaaacctatcaatttcttcagtccaaaattcaaaatccgattagtaattgccatttcagtctgatgctgatgcatgcctctggagccctggacaatgatgtttgggacccctgccatgaagtggccaagaatgcccccatcccaagaattttttttttcctttcctttccttctcccccccttcttcagataaggttgtctaattgtcttagtgctccatggggacagattcttcttgatattttccattccacaactcaacttgcacactaggttagtttctgctactagtgaccattgtctggtccacatgattgattgcttgcttgcttgcttatctccatgtgacaatgtcactagaaggatgacggcagaggaggaaagggaaatgacaaaggcatgtctcaccatcagccaagattaacttgagtgcggtcagctgattgattcctgaataattgagtagcagcacatgattgattcgtttatgtggcccaacaggtgtccatagctaacagtgcctcaaatagtcaaactgattgtgcaattatcacagcactaatttcctgggggaatctagtggataagaatttcaatggctgttacgcttttgtcattatcactaactttcttaaccagattgtggagttactgaaactgttttactttatggtgtatcacaggttatctgctctctctgcgacaaagaacaggatgtaagtagtttatagaaaggtgcaatagaatttctcgagtgtacaacagtagaatttctggattgtgctaacttttttttttctgtactgatcacatgaaaattgttcactttgatcgacaggtacaacagtactgttctggttgtggggcatgcatggggaaatacttctgcgaaaaatgcaacttctttgatgatgatgtaagcatgtttggattacaaatgatgattctacgttacatctaagtttctaatgtggcaagtatggttcataaatgtatgatgatgcttaacaacctgactaacatatttgtttggtttgttccaggtctcaaagaaccagtatcactgcgatggatgcggcatatgcaggcaagtcctaaatctatctctatgaattattttctgcatttactattttattcagtttgatcaattttggatatgcccattttttttccagaactggtggtgtggataagttctttcactgcgacaaatgcggtatgttctgcatgatcttaatgcaatgagccagtgatgcgtattccccaaaattttttgacattctcgccacatgtcgctgataaacaagattggtctaacatttgctattcctcactaaacagggtgttgctacagtaatgtcttgagggattctcatcactgtgtagaaggagcaatgcatcacaactgtcctgtctgcttcgaggtgagccttgctttccacaaatgcatttggtattcagaaaggtagagaaaaaaaaacaacattctcaatttgtttccagttcttgagatctgacataaaaaaatttgctctccttttccaaatcacagtacctatttgactcgacgaaggacatcagcgtcttgcactgcgggcacacgatccatctggaatgcctgaacgtgatgagagcgcatcatcagtgagtgttcttcagacaaaaaacttcacctgataaaactttctcctaaccaaaccaatgcaatgattctgatatcccccagcttcgcttgcccggtgtgctcacggtcggcctgcgacatgtcggacgcgtggaagaagctcgacgaggaggtggccgcgacgccgatgccggagttctaccagaagaagatggtcagtaaaacaccaaacatttctccaaaatctcgtgtgccattcttcagtgaacatttttttagataatggaaatggattacatctccggcctctgctcgtaggcacacaactaaaaagtccagaagtgaatagaaaagagcttaaaaaaagacgagatgggacaaaccctcaacttctaccaataatatgatctactaaaataatgtttctaaaatcatgtagattctatcacaaaattctgtaggtactacgccatccagactggaataaaagttctttggctaccaattcttgagtgaacatggctgggactctgaacaatcctttgatgattcttcttcttcctcctcattcagatatggatcctctgcaacgactgcggcgcgacgtcgaacgtgaacttccacgtcctggcgcagaagtgccccggatgcagctcctacaacacccgggagaccagaggctgcggccgccctgcagccgcgcgctccacggtttgatttcagcagcaggagcagcagcagcagagacgagttggcatccatctcacaaactaaggatgaaatcgagagcgacaaacaagatgcagagacggcttcctctgaacttagccgtcgagcaaaagctgcaaaatcgatcggcgtcgagtttggtagacacactttgcgccaagaggagtatggtgattttggcgcagtatgcagcgagttgaatagcccatatatgttgtgttttctctctctctcttttttgtgaggatatatgttatgttttgaaactccaactattattattactaaatgatactcctaataaaagagagacatcttctcaag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0456800, RefSeq:Os10g0456800