Os10g0470700

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Revision as of 08:41, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0470700| Description = Similar to Peptide transporter| Version = NM_001071358.1 GI:115482459 GeneID:4348866| Length = 5209 bp| Definition ...")
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Gene Name

Os10g0470700

Description

Similar to Peptide transporter

Version

NM_001071358.1 GI:115482459 GeneID:4348866

Length

5209 bp

Definition

Oryza sativa Japonica Group Os10g0470700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17872818..17878026

Sequence Coding Region

17872949..17873087,17875504..17875721,17876410..17877885

Expression

GEO Profiles:Os10g0470700

Genome Context

<gbrowseImage1> name=NC_008403:17872818..17878026 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:17872818..17878026 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccatggcggcggagagggtggaggctgccggcggcggcgacgacgactacacgcaggacggcacggtggacctccatggcaacccggtgctccggtccaagcgcggtggctggaaggcatgcggcttcgtcgtcgtgtacgaggtgttcgagagaatggcgtactacgggatatcgtcgaacctggtgctgtacctgacgacgaagctgcaccaggggactgtgtcgtcggcgaacaacgtcaccaactgggttggcaccatctggatgaccccgatcctcggcgcctacatcgccgacgcgcaccttggccgctaccgcaccttcatgatcgcctccctcatctacctcatcgggatgagcctgctgacgctggcggtgtcggtgccgtcgctgaagccgcccaagtgcggcgccggcacggcggacccgggctgctcggagaaggcgtcgagcctccagctgggcgtcttcttcctcgcgctctacatcctcgccgtcggcaccggcggcaccaagcccaacatctccaccatcggcgccgaccagttcgacgaccaccacccgcgggagcgccgccataagctctccttcttcaactggtggatgttcagcatcttcttcggcaccctcttcgccaacaccgtcctcgtctacctccaggacaacgtcggctggaccgtcggctacgcgctccccaccctcggcctcgccgtctccatcgccatcttcaccgccggcacgccgttctaccgccacaagcccacctccggcagcagcttcgccaggatggccagggtcatcgtcgccgccatccgcaagctcgccgtcgcgctgcccgacgacgcgagggagctccacgagcttgatgatgagtactacgccaagaagaagaccacgccgctgccgtacacgccgtacctgaagatcctgagcaaggcggcggtgaagacgagcacgacgtcgaggtggtcgctgagcacggtgacgcaggtggaggagacgaagcagatactcaagatgctgcccgtgctggcggtcacgttcgtgccggcggcgatgatggcgcaggtgaacacgctgttcgtgaagcagggcacgacgctggaccgccgcgtcggcggcgggggcttcgagatcccgccggctagcctgcaggcgttcgtgaccatctcgatgttggtgtccgtcgtgctgtacgaccgcgtgttcatgccgctcatggcgcgggcgaccgggaacccgcggggcatcacgctgctgcagcggatgggcgtggggctcgtcatccacatcgccatcatggggatcgcctccgtgacggagcggcacaggctcgccgtggcgcgggagcacggcatcgcggacagcaagggcaccaccatcccgctcaccatcttcgtgctcctcccgcagttcgtgctcatgggcgtcgccgacgcgttcctggaggtggccaagatcgagttcttctacgaccaggcgcccgaggggatgaagagcctgggcacgtcgtacgccatgaccagcctcggcgtcggcaacttcctcagcagcctgctgctgtcgacggtggcgcacgtcacgcgccgccatggcggcggcggcgggtggatccagaacaacctcaacgcgtcgcggctcgaccactactacgccttcttcgccgtcctcaactgcgtcaacctcgtcttcttcttcctcgtctgccgcctctacgtctacaacgccgaggtgtcccgcgtcgtcgacgtcggcggcagaggcggcggcgaaggcggcgaggtgctcaggcccaaggaggtggccatggtggacacaaatctatag</cdnaseq>

Protein Sequence

<aaseq>MSMAAERVEAAGGGDDDYTQDGTVDLHGNPVLRSKRGGWKACGF VVVYEVFERMAYYGISSNLVLYLTTKLHQGTVSSANNVTNWVGTIWMTPILGAYIADA HLGRYRTFMIASLIYLIGMSLLTLAVSVPSLKPPKCGAGTADPGCSEKASSLQLGVFF LALYILAVGTGGTKPNISTIGADQFDDHHPRERRHKLSFFNWWMFSIFFGTLFANTVL VYLQDNVGWTVGYALPTLGLAVSIAIFTAGTPFYRHKPTSGSSFARMARVIVAAIRKL AVALPDDARELHELDDEYYAKKKTTPLPYTPYLKILSKAAVKTSTTSRWSLSTVTQVE ETKQILKMLPVLAVTFVPAAMMAQVNTLFVKQGTTLDRRVGGGGFEIPPASLQAFVTI SMLVSVVLYDRVFMPLMARATGNPRGITLLQRMGVGLVIHIAIMGIASVTERHRLAVA REHGIADSKGTTIPLTIFVLLPQFVLMGVADAFLEVAKIEFFYDQAPEGMKSLGTSYA MTSLGVGNFLSSLLLSTVAHVTRRHGGGGGWIQNNLNASRLDHYYAFFAVLNCVNLVF FFLVCRLYVYNAEVSRVVDVGGRGGGEGGEVLRPKEVAMVDTNL</aaseq>

Gene Sequence

<dnaseqindica>132..270#2687..2904#3593..5068#agctggagctcgatcctgaagagcagtatcagtgctcagctcactgttcatcatcaccctcacctcttctctctccctcccttaccttcctccatagacgactgcagctagctcgatcggagatcgaggccatgtccatggcggcggagagggtggaggctgccggcggcggcgacgacgactacacgcaggacggcacggtggacctccatggcaacccggtgctccggtccaagcgcggtggctggaaggcatgcggcttcgtcgtcggtaaggattgaagacgatgaactctctctcgtgcatccggttggattcagcatatatgcatgcagtgatctaattaatcctttcagcttgattaatctgtcatgaacaattcatggcagggtttctcctttctttcatgggttggcatatggtttaattacttgcaaattgattgatattcttggttagaaactagacatatcgaggcttgtgtttgatttgtttatatgccacgagcgtttgaacattttcctcatctgctcacccctcaccgcatgcggcgggtgcaggatttgggagatttgttttgataggatcgatgattgtttgttattttgtccggccaatcgccatggttttcattagctgccattttgtactcctgccatagtctttggtactactatttttataatctccctacctcgtgtctcagacaaaatatcctccttggtattataacctctacggtatctctcaaggacgtaagagtagagtacttcgtcatgcctgataaccttttttcacgaatacgcaaaaggtttgtgtttctttgttccaagaaggtagagaccaccatgtgcaatactagttgttaactggtcgcttgatcgcatcgttttctgtgaagtcagagtcaacatatcacagtgtatctgctcaaagtctctcacatggatagtaacatgtgctacagtatttctgtacttgcgccactttcctgtagaaatggttcttcagtgattgtgtatacatgtactgtactgactaatcagtcagagcatacggttcaagtggtcaacgctgacaagaagcaggacaaaatcaaaaacactatagtacaaggttttccctacctccttttcttttttaagggcctattcggattggagaaatttcacgggatttttgaaggaactgaactgttgttacctgtgaaaatcttgtaaaatcgaaggagccctaagatttctcctacatcttctgaatttctgatagataacaatacaagtacatggtgtgccaatcactgaagactgaagatgatatgtatgggcagtgtgtagctagcacagtaggaaaatgtcaaaaagttcagtatgttcaggaccactgaatttatcctactaggaacaggcgtgcatgattttctgaatttctgatagatacaccagcggtggctatgaactgaagaagctggatagaaacttcactgttgcaatatgcagtgctaatttaatacagtactacttctaatcctcccaaactttggagtgatcttttcatagattaggaaaaggtgtagttaaccaacttgaacatggactgccgttttgtctgaagtgttggttcgattcagacccagctgaaaaacaatttaaggcaggagtgagttagtttggattcctacggttaattactagcagttgatccaataacagtttgcgtcatcagagatgcaatttagactgaatctgacagggaaaaagcctaagaaattgtttggtgatggctgccctgtcctgtctgcttggagcgacaaataggagttggaaattgacctttgtgttaatcaacggtttagggtagggacccagctgatccctactatatgattgcttggaaagaggcgttttgttccagcccggttggaatctgtatctcatcgcattatttgttcatgacaagaaagaatgattatgttagtggctgtcaccttccaatgatcacaacacttattagctcgttgtaaatgtgctatcttctctgtcatagaggattcttgttttactttgacaaataacaaaagaagtacatgttcattgaaactggtttgcatgaacaacttgtccaaactgcaaaatgttttttttctaaataaaagagaagagttaaaacataggatgctctgttgcatggttgtgtggtggttatggtttggttagaaatgcagagaccatgagtcctgtggctcatgagagagaatggtacctcggtaaaaaatggttggttgatctccatgcatatattttcccaaccatacataaatctggtccttaattagttaactaaggttgtgtttttccccttttccccccaacagcccaacttaccttcctcttttttcccacgcacgtttttcaaacggctaaacgatatattttttaaaaaagttttctataggaaagttgctttaaaaaaatcatattaacctatttttctaaaacaataactaatacttaattaattatacaccaataagtcattctgttctacgtgcacgagggattagtcccaacggccactgccaaacacagcctaagaattcatgtgttccaaacagaatgtactgttactactgtataccatgttttaaagtgaattattgttgtgctgataatgaaaaaaaatgcagtgtacgaggtgttcgagagaatggcgtactacgggatatcgtcgaacctggtgctgtacctgacgacgaagctgcaccaggggactgtgtcgtcggcgaacaacgtcaccaactgggttggcaccatctggatgaccccgatcctcggcgcctacatcgccgacgcgcaccttggccgctaccgcaccttcatgatcgcctccctcatctacctcatcgtaagtccctcacctactccatctccctccatctacagcagagcacgagaatcttggaacagatcaaatgaactataccctctgtgctaaaatataaacatttttagcatcgtggcaagtcatacatttctaactttgatgattattaatagcaaaaaattgatgattaatagcaaaaaaaatataaaaaatcaatcatgtaaaattgatcttaccattaaacaaactattataatatatgtaactatttttatttaaaacatcttacttttatatatattgttggtcaaatagcatctcggatactgtgacaggatctaaaattacttatattttttaggacgcggggagtagaaatcaaaagctagaaaataaattagaaaccagaacttaaaaaatctattggacttttagattttcaaaagttagttacccaccagctgcttggattgctctcgtgttgaaaaatgcagtccctgtctgaagactgtacgaccatctagctgctctagcccacaaaaatcaagatgggctttagctcgaagcccacaaagtccagtgaaaaaacaaattgcaagcccaaatccagcacgactaattcaaaccaaatctgtagatttttgttaccaaatttgatcgatagattccgaatttttgaacgtcgctcgtctcgtctcgtctcgtgcaggggatgagcctgctgacgctggcggtgtcggtgccgtcgctgaagccgcccaagtgcggcgccggcacggcggacccgggctgctcggagaaggcgtcgagcctccagctgggcgtcttcttcctcgcgctctacatcctcgccgtcggcaccggcggcaccaagcccaacatctccaccatcggcgccgaccagttcgacgaccaccacccgcgggagcgccgccataagctctccttcttcaactggtggatgttcagcatcttcttcggcaccctcttcgccaacaccgtcctcgtctacctccaggacaacgtcggctggaccgtcggctacgcgctccccaccctcggcctcgccgtctccatcgccatcttcaccgccggcacgccgttctaccgccacaagcccacctccggcagcagcttcgccaggatggccagggtcatcgtcgccgccatccgcaagctcgccgtcgcgctgcccgacgacgcgagggagctccacgagcttgatgatgagtactacgccaagaagaagaccacgccgctgccgtacacgccgtacctgaagatcctgagcaaggcggcggtgaagacgagcacgacgtcgaggtggtcgctgagcacggtgacgcaggtggaggagacgaagcagatactcaagatgctgcccgtgctggcggtcacgttcgtgccggcggcgatgatggcgcaggtgaacacgctgttcgtgaagcagggcacgacgctggaccgccgcgtcggcggcgggggcttcgagatcccgccggctagcctgcaggcgttcgtgaccatctcgatgttggtgtccgtcgtgctgtacgaccgcgtgttcatgccgctcatggcgcgggcgaccgggaacccgcggggcatcacgctgctgcagcggatgggcgtggggctcgtcatccacatcgccatcatggggatcgcctccgtgacggagcggcacaggctcgccgtggcgcgggagcacggcatcgcggacagcaagggcaccaccatcccgctcaccatcttcgtgctcctcccgcagttcgtgctcatgggcgtcgccgacgcgttcctggaggtggccaagatcgagttcttctacgaccaggcgcccgaggggatgaagagcctgggcacgtcgtacgccatgaccagcctcggcgtcggcaacttcctcagcagcctgctgctgtcgacggtggcgcacgtcacgcgccgccatggcggcggcggcgggtggatccagaacaacctcaacgcgtcgcggctcgaccactactacgccttcttcgccgtcctcaactgcgtcaacctcgtcttcttcttcctcgtctgccgcctctacgtctacaacgccgaggtgtcccgcgtcgtcgacgtcggcggcagaggcggcggcgaaggcggcgaggtgctcaggcccaaggaggtggccatggtggacacaaatctatagaaaatgtatcgatcgatgatcaaatataccatgaaattaatatcaccttcagaaatgctaacaacagcggcttcagcttattttcagaacagtgaacatatggatgcactctgaccagaaaaaaaaacgaaatttttgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0470700, RefSeq:Os10g0470700