Os10g0474800

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Revision as of 08:41, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0474800| Description = Long-chain fatty alcohol dehydrogenase family protein| Version = NM_001071374.2 GI:297610643 GeneID:4348882| Length ...")
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Gene Name

Os10g0474800

Description

Long-chain fatty alcohol dehydrogenase family protein

Version

NM_001071374.2 GI:297610643 GeneID:4348882

Length

2443 bp

Definition

Oryza sativa Japonica Group Os10g0474800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18076400..18078842

Sequence Coding Region

18076400..18078238,18078837..18078842

Expression

GEO Profiles:Os10g0474800

Genome Context

<gbrowseImage1> name=NC_008403:18076400..18078842 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18076400..18078842 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaagtggacgagaacttggagaacccaagttggaaggcaatcgggtacagcgtcccggcggccgaggaagagccacagaaagaagaacctacagaagcaacgccgacgccggcgccggcgacggcgccgccgtgccggcctctggacaatggcgtcgtggagaccaagcagctggacgacaacgccttgctcatgtcgctcgcggagaagggcctcgcgctgaagacgggcgcgtcgtcgccgagcgcgcaccaccacacggtgctgtgcgacgccgtcgtcgtcgggtccggctgcggcggcggcgtggccgccgccgtgctcgcgtcggccgggtacaaggtcgtcgtcgtcgagaagggggactacttcgccgccagggactacagctcgctggagggcccgaccatggagcgcctctacgagaatggcggcgtgttcagcacggcgaacgtgacgaccaccatgttcgccggcgcgacggtcggcggcggctcggcggtgaactggtcggcctgcatccgcacgccggcgaacgtgttgcaggagtggtcgaacgaccatgggctccctctgttcggggggcaaggctacgtgcaggccatggacgccgtgtgcgctcggctcggcgtcaccggccggtgccgggaggaggggttccagaacaaggcggtgcgccgcggctgcgaggcgcttgggctgcgcgtcgaggccgtgtcgcgcaactcgtcggaggggcacttctgcggcagctgcaacctcgggtgccccaccggcgagaagcgcggcaccgacacgacgtggctcgtcgacgccgtcggccgcggcgccgtcatcctgaccgggtgcaaggccgaacggttcatcctcgagacgaacaccggcggcggcggcggccggcgcaagaagtgcgtcggcgtcgtggcgaagtgcttgggcaaaggcatcaccaagaagctccggatcgaggcgaaggtgtccgtctcggcgtgcggcgcgctcatgacgccgccgctgctgcgcaacagcgggctcaagaaccgccacatcggccggaaccttcacctccacccggtgtccatggcgtggggctacttcccggacagcacggcggagctcccgggcaagtcctacgagggcggcatcatcaccagcatgcaccgcgtcaccgaccgcaccatcatcgagacgccggcgctcggcccgggcgcgttcgccgccgtggtgccgtgggagtccggccgcgacatgaaggagcggatgcggcggtacgcgcgcacggcgcacgcggtggtgctcgtccgcgaccgcgccgcgggcaccgtcggcggcgagggccgcgtccgcttcaccccgagccgcggcgacgccggcgagctccgcgccggcctgcggcgcgcgctgcgcatcctggtggccgccggcgccgccgaggtgggcacgaaccgcagcgacgggctgcgcctccggtgcaagggcgcgcgtgacgaggacgtggaggcgttcctggacgaggtgagcgtggagaaggggccgatgcacccggggtcggacaagtgggcgctccttgcctcggcgcaccagatggggagctgccggatggggaggagcgccaagcacggcggcgtcgacggcggcggcgagagctgggaggcggaggggctgtacgtctgcgacggcagcttgctcccgacggccgtcggcgtcaacccgatgatcaccatcgagtccgtggcgtattgcgtcgccaagggcatcgccgagtcgctcgcgtcgcgcgcagcgcgctcagtggaaaaccgtgatgtgtccacgaaccctcctctagcttgtgaatcgtaa</cdnaseq>

Protein Sequence

<aaseq>MQVDENLENPSWKAIGYSVPAAEEEPQKEEPTEATPTPAPATAP PCRPLDNGVVETKQLDDNALLMSLAEKGLALKTGASSPSAHHHTVLCDAVVVGSGCGG GVAAAVLASAGYKVVVVEKGDYFAARDYSSLEGPTMERLYENGGVFSTANVTTTMFAG ATVGGGSAVNWSACIRTPANVLQEWSNDHGLPLFGGQGYVQAMDAVCARLGVTGRCRE EGFQNKAVRRGCEALGLRVEAVSRNSSEGHFCGSCNLGCPTGEKRGTDTTWLVDAVGR GAVILTGCKAERFILETNTGGGGGRRKKCVGVVAKCLGKGITKKLRIEAKVSVSACGA LMTPPLLRNSGLKNRHIGRNLHLHPVSMAWGYFPDSTAELPGKSYEGGIITSMHRVTD RTIIETPALGPGAFAAVVPWESGRDMKERMRRYARTAHAVVLVRDRAAGTVGGEGRVR FTPSRGDAGELRAGLRRALRILVAAGAAEVGTNRSDGLRLRCKGARDEDVEAFLDEVS VEKGPMHPGSDKWALLASAHQMGSCRMGRSAKHGGVDGGGESWEAEGLYVCDGSLLPT AVGVNPMITIESVAYCVAKGIAESLASRAARSVENRDVSTNPPLACES</aaseq>

Gene Sequence

<dnaseqindica>605..2443#1..6#atgcaagtaaatttgatgacatggaagaaagagaaatgtgtatggttgttatgcatgacaacagctcagagtcgactcttagtatttattagagcaaattttgttgcatggtggtgaaagaaaggaaagaaaagtaagaaaaagtattttgatacattaatgattagagaccatattgtctctaactgttataggatgctagtctctatataacgtagagctcatatttaactctatctttgtacatgcccttattgtggtaaattgtgtttactattaatccgtctctaattttatagaaatgcaattattatgggacggatgtagtacttcacagtgtaaacttactatagaatatattgacacttggaaccttattaagaatggtaaaatactgtaatttttacataatgaaattaccacaagttaacttactatagttttggtagtattttaccataccttattaagaattgtacttttttttctttggttcatgaaaaatctgaccattataaaaatcataaaagaaatgcaagcatacacattttcacagaaaattcgaattatcaacgatttaaccttcttttcccaacatatgtaggtggacgagaacttggagaacccaagttggaaggcaatcgggtacagcgtcccggcggccgaggaagagccacagaaagaagaacctacagaagcaacgccgacgccggcgccggcgacggcgccgccgtgccggcctctggacaatggcgtcgtggagaccaagcagctggacgacaacgccttgctcatgtcgctcgcggagaagggcctcgcgctgaagacgggcgcgtcgtcgccgagcgcgcaccaccacacggtgctgtgcgacgccgtcgtcgtcgggtccggctgcggcggcggcgtggccgccgccgtgctcgcgtcggccgggtacaaggtcgtcgtcgtcgagaagggggactacttcgccgccagggactacagctcgctggagggcccgaccatggagcgcctctacgagaatggcggcgtgttcagcacggcgaacgtgacgaccaccatgttcgccggcgcgacggtcggcggcggctcggcggtgaactggtcggcctgcatccgcacgccggcgaacgtgttgcaggagtggtcgaacgaccatgggctccctctgttcggggggcaaggctacgtgcaggccatggacgccgtgtgcgctcggctcggcgtcaccggccggtgccgggaggaggggttccagaacaaggcggtgcgccgcggctgcgaggcgcttgggctgcgcgtcgaggccgtgtcgcgcaactcgtcggaggggcacttctgcggcagctgcaacctcgggtgccccaccggcgagaagcgcggcaccgacacgacgtggctcgtcgacgccgtcggccgcggcgccgtcatcctgaccgggtgcaaggccgaacggttcatcctcgagacgaacaccggcggcggcggcggccggcgcaagaagtgcgtcggcgtcgtggcgaagtgcttgggcaaaggcatcaccaagaagctccggatcgaggcgaaggtgtccgtctcggcgtgcggcgcgctcatgacgccgccgctgctgcgcaacagcgggctcaagaaccgccacatcggccggaaccttcacctccacccggtgtccatggcgtggggctacttcccggacagcacggcggagctcccgggcaagtcctacgagggcggcatcatcaccagcatgcaccgcgtcaccgaccgcaccatcatcgagacgccggcgctcggcccgggcgcgttcgccgccgtggtgccgtgggagtccggccgcgacatgaaggagcggatgcggcggtacgcgcgcacggcgcacgcggtggtgctcgtccgcgaccgcgccgcgggcaccgtcggcggcgagggccgcgtccgcttcaccccgagccgcggcgacgccggcgagctccgcgccggcctgcggcgcgcgctgcgcatcctggtggccgccggcgccgccgaggtgggcacgaaccgcagcgacgggctgcgcctccggtgcaagggcgcgcgtgacgaggacgtggaggcgttcctggacgaggtgagcgtggagaaggggccgatgcacccggggtcggacaagtgggcgctccttgcctcggcgcaccagatggggagctgccggatggggaggagcgccaagcacggcggcgtcgacggcggcggcgagagctgggaggcggaggggctgtacgtctgcgacggcagcttgctcccgacggccgtcggcgtcaacccgatgatcaccatcgagtccgtggcgtattgcgtcgccaagggcatcgccgagtcgctcgcgtcgcgcgcagcgcgctcagtggaaaaccgtgatgtgtccacgaaccctcctctagcttgtgaatcgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0474800, RefSeq:Os10g0474800