Os10g0484800

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Revision as of 08:42, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0484800| Description = Type III polyketide synthase family protein| Version = NM_001071426.1 GI:115482595 GeneID:4348937| Length = 2310 bp|...")
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Gene Name

Os10g0484800

Description

Type III polyketide synthase family protein

Version

NM_001071426.1 GI:115482595 GeneID:4348937

Length

2310 bp

Definition

Oryza sativa Japonica Group Os10g0484800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18773551..18775860

Sequence Coding Region

18773603..18773798,18774621..18775594

Expression

GEO Profiles:Os10g0484800

Genome Context

<gbrowseImage1> name=NC_008403:18773551..18775860 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18773551..18775860 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgaccttggattcggcgatgccaggagtggcaatggcagcaggagccaatgctccagggggaaggcgatgctgctcgccctcggcaagggcctccctgagcaagttcttccccaggagaaggtcgtcgagacctacctccaggacaccatctgcgacgatcctgcaacaagggcaaagctggaaagactttgcaagaccaccacagtgaggacaaggtacactgtcatgtcaaaggagctcctagacgagcacccagagctcaggactgagggaactccaacactgacgccacggcttgacatctgcaatgctgcagtgcttgagcttggtgctactgcagcccgtgccgcccttggtgaatgggggcgtccagcagctgacatcacccaccttgtctacatctcgtccagtgagcttcgcctcccagggggtgaccttttcctggcaactcgccttggcctccatccaaacaccgtccgcacttcccttctcttccttggctgctccggtggcgctgccgcgctccgcaccgccaaggacattgctgagaacaacccagggagccgcgtccttgtagtagccgcggagacgacggtgctgggattccggccaccaagtcctgaccgtccttacgatcttgttggtgctgccctgtttggtgacggcgcatcagctgcgatcattggagcaggccccattgctgctgaggagagtcccttcctagagcttcagttctcaacacaggagttcctaccagggacggacaaggtaattgatggcaagatcactgaggaagggattaatttcaaactggggcgtgatttgcccgaaaagattgaaaaccgtatagaagggttctgcaggacactcatggatcgggttgggataaaggagttcaatgatgtattctgggctgtgcatcctggtggtccagcaatactgaacaggctagaggtttgccttgaactccagccagagaagctcaagatcagtagaaaggccctgatgaactatggtaatgtgagcagcaacaccgtcttctatgtgttggagtatttgagggatgagttgaagaaagggatgataagggaagaatggggactgatcttggcttttggcccaggcatcacatttgaaggaatgctagttcgaggcattaactga</cdnaseq>

Protein Sequence

<aaseq>MADLGFGDARSGNGSRSQCSRGKAMLLALGKGLPEQVLPQEKVV ETYLQDTICDDPATRAKLERLCKTTTVRTRYTVMSKELLDEHPELRTEGTPTLTPRLD ICNAAVLELGATAARAALGEWGRPAADITHLVYISSSELRLPGGDLFLATRLGLHPNT VRTSLLFLGCSGGAAALRTAKDIAENNPGSRVLVVAAETTVLGFRPPSPDRPYDLVGA ALFGDGASAAIIGAGPIAAEESPFLELQFSTQEFLPGTDKVIDGKITEEGINFKLGRD LPEKIENRIEGFCRTLMDRVGIKEFNDVFWAVHPGGPAILNRLEVCLELQPEKLKISR KALMNYGNVSSNTVFYVLEYLRDELKKGMIREEWGLILAFGPGITFEGMLVRGIN</aaseq>

Gene Sequence

<dnaseqindica>53..248#1071..2044#aggactagaatacttgctgactactgaggcgaaaggataccgggtggcgaagatggctgaccttggattcggcgatgccaggagtggcaatggcagcaggagccaatgctccagggggaaggcgatgctgctcgccctcggcaagggcctccctgagcaagttcttccccaggagaaggtcgtcgagacctacctccaggacaccatctgcgacgatcctgcaacaagggcaaagctggaaagactttgtgagttttgttcatgtcacttggtattttacatcctgctttctaggtttgagaattttcagaagccaacatagttggcttagctctcctgaaaaatataactggaccctgagttatcaaaagattgttgtttgttggcttggctgcatcactgtgtgtagaatctagctttatttttatgcatctgagactattaatcatcataggttgataatggaactagtagaatgagaaagataaatagatcatcgtttagtgaaaatgggcacatgatcatcagtactactaaattttagtagcacttctgcttaacaaaaatcagtagggtgtggaaaatgaaattattacagtgaaaaaggcaacagattgtaattagtaaacaacatgtgcacatgataagtactccctaacttacaggagcacttggctctaggaaaatcactacaatgctgcttggcaagtctttggattatagtccaaatatgatattgaattttagatattcattgtatgggttttcttcatcacttttattggtcagctttcttttcatgattgctaaggggacatgtaaaaattcaacctagaattattcttaatcaaagttcaaaatcattttggattatagtctgcagtacaaataagcacaacacaaatttagttgccatttttctggcttggccaagggctgacaaaataagagttataggagataatcacaatatatataccttgaatttgttctgtcatgacttgcacagtccctccaatgcacaaaattgtgggtacttattttcctacaatttgattttttttttacaggcaagaccaccacagtgaggacaaggtacactgtcatgtcaaaggagctcctagacgagcacccagagctcaggactgagggaactccaacactgacgccacggcttgacatctgcaatgctgcagtgcttgagcttggtgctactgcagcccgtgccgcccttggtgaatgggggcgtccagcagctgacatcacccaccttgtctacatctcgtccagtgagcttcgcctcccagggggtgaccttttcctggcaactcgccttggcctccatccaaacaccgtccgcacttcccttctcttccttggctgctccggtggcgctgccgcgctccgcaccgccaaggacattgctgagaacaacccagggagccgcgtccttgtagtagccgcggagacgacggtgctgggattccggccaccaagtcctgaccgtccttacgatcttgttggtgctgccctgtttggtgacggcgcatcagctgcgatcattggagcaggccccattgctgctgaggagagtcccttcctagagcttcagttctcaacacaggagttcctaccagggacggacaaggtaattgatggcaagatcactgaggaagggattaatttcaaactggggcgtgatttgcccgaaaagattgaaaaccgtatagaagggttctgcaggacactcatggatcgggttgggataaaggagttcaatgatgtattctgggctgtgcatcctggtggtccagcaatactgaacaggctagaggtttgccttgaactccagccagagaagctcaagatcagtagaaaggccctgatgaactatggtaatgtgagcagcaacaccgtcttctatgtgttggagtatttgagggatgagttgaagaaagggatgataagggaagaatggggactgatcttggcttttggcccaggcatcacatttgaaggaatgctagttcgaggcattaactgagactgaaaggggtccaagaagactttcagctagatggaagaatcacaaacataccatttccaggttaagtatatagtatgaacttgaaacatctcataaggagcatagatgtcttgacagcatctgtgcactacatagttattgttttactgtaatctatgttttatgtatcaaacaatgtgaggtactctagtttgaatgcaagatacttgaaaaaatatcaggcaatacattgcatcctgttacattgtcatgtatagtaattt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0484800, RefSeq:Os10g0484800