Os10g0486300

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Revision as of 08:42, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0486300| Description = Zinc finger, C2H2-type domain containing protein| Version = NM_001071437.1 GI:115482617 GeneID:4348948| Length = 332...")
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Gene Name

Os10g0486300

Description

Zinc finger, C2H2-type domain containing protein

Version

NM_001071437.1 GI:115482617 GeneID:4348948

Length

3322 bp

Definition

Oryza sativa Japonica Group Os10g0486300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18861454..18864775

Sequence Coding Region

18861454..18862014,18862819..18862896,18864578..18864775

Expression

GEO Profiles:Os10g0486300

Genome Context

<gbrowseImage1> name=NC_008403:18861454..18864775 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18861454..18864775 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgccattgccggatgctgtgaaagaggaagacgaaggcaacatggacagcttccagtcaggccagacgatcatcgggcaagacgacttcatggccatcttcaggaacgacaagcccctctgcgagcttctgatgaagatcggccagcgaacttccggcagcagcggtgccaagccggctgctcctcctccgattgttcatttgcacggcctaatccccgatgagctgtgcaaaatagaccatcgtcctgcattatcagattttctgtcggcgcagcagcagcagcagcagccacctccaccggcgcagcatggcgcatgcgtgaagaggccggcgatcgggccgcctccggggttcgccggcgtccgccagccaccgcagaagcagcagcagctgccaccaccaccacggcggagggcgcagcagcagccggcgagcgccgccgcccatcaccgcaacccgaaccgccaccacctgtccggcgtcgccgcgccgcccgcggcggcggcaaacgccctgtcgatcatgaggaaggcggcggccgccggcggtggcggcgccgccctgtactgcggcgtgtgcaacgtgaagtgcatgacgcggttcaacctgagggagcacgaggccgggaggaagcaccgggacaaggtggccagcaacgccggcgagaagaacgtccggtgccagctctgcgacgtgctgctcgccagcgagctcaacgtcgcgcagcactacgccggcaagcagcacctccaccggctccgcctcagccgcggccgcggcggcggcggcggcggcggcaatggcgccacgggcgccggagcagcctaa</cdnaseq>

Protein Sequence

<aaseq>MAAPLPDAVKEEDEGNMDSFQSGQTIIGQDDFMAIFRNDKPLCE LLMKIGQRTSGSSGAKPAAPPPIVHLHGLIPDELCKIDHRPALSDFLSAQQQQQQPPP PAQHGACVKRPAIGPPPGFAGVRQPPQKQQQLPPPPRRRAQQQPASAAAHHRNPNRHH LSGVAAPPAAAANALSIMRKAAAAGGGGAALYCGVCNVKCMTRFNLREHEAGRKHRDK VASNAGEKNVRCQLCDVLLASELNVAQHYAGKQHLHRLRLSRGRGGGGGGGNGATGAG AA</aaseq>

Gene Sequence

<dnaseqindica>2762..3322#1880..1957#1..198#atggcggcgccattgccggatgctgtgaaagaggaagacgaaggcaacatggacagcttccagtcaggccagacgatcatcgggcaagacgacttcatggccatcttcaggaacgacaagcccctctgcgagcttctgatgaagatcggccagcgaacttccggcagcagcggtgccaagccggctgctcctcctccggtgagagtactgaatcagcttcactttaataatcctgtatcaattttgttcagattcgtgtggattaatctggattcttttatgcttatttaccgaattattgtggtagattatttgccccacgattaattttattctcattaattcatgtggatttttttcatgaggatgttctttaccttattcactggattattgtcacgattatgtgctccacacttcttcttaaacaatgttcttctacttagggcatcaccaatatatatgacaaagtgatccatatagatgggacccacataaatagtttattcatatggtaatgtccacaatgtatagatacaaggtatcattagaagaagagagagaagtagagatagataatataatttattccatatgggtatcttttgctattttttctatatggactagttgcacaatggtaataggtggctgaatgtaatattctattgcttatggactacttttacaccacattgtggatgccctaatagcattgtttagaccacttgttcaaatttgataagttaacttatttataataagtagataatctataactataatatgatgaataatctgtaggtttgagtgtagcgacaaggatattattgctccatttggtatgcttagacgtggcaattactaattagttagtgttagtgccttctgttagttgagtggtagtgctgttttctcttaaacaataatcagcactttaattttaatgggaactaataagatagtagaagaaatctctcttcaacctttttgtgaaaaaaaaaattctatattaacctctctaagctcctgttagcttctggaaatacaattctgagttgatcttttgttgccatgaaccatataaatctgcactcgcattgaacttcatgcagagcttgacttcttaatgctctgagacatttcttttaagataaagagtcctttgagaatgaaatgaaaattactagcgcatcataaaagttctatattgcaaaggcgaccgtaaattttgtcaacattgtgacttctcgacgataatttcgcgagaattttgatatacgaaaaaaataatgaagttatttattcctttacgcatacaggattttgttgtgcgtttcaaatatgtcgttacttcaattgatggtttctgttgagcacatgccactttatttgcaatttagtctttctgttccacctgccacctgcgacaggaaacatctacaccaacaacaatgtggcaaaatgcttagtcccaacccccaaatatttggaaaacagtattagtttgttcaaatatcaaatctgctgcatagttaaatagtaagtggactgtttagctacttaacttaactgtagtcgcttaatttcaatgttgaatatgaaacccaaatcttcccatctgtgtacaattaagtagctgactagagaagacaagcctaagccattaaaaatgtagttaggatactacataataattttgggggtccaataattaatccaaatacatcttttcattccttaatcacttttctgtaccataaatggacagaaaaaaaaaggcatgcttttatcatgctagggagaaccctgtctcttgcatagcaacaagccaccaactaagaacttaaaatgtcacgaactagcttacttcttgtagattgttcatttgcacggcctaatccccgatgagctgtgcaaaatagaccatcgtcctgcattatcagattttctgtcggtatgctaatccctccacgctaaaaagtcaatttacaataatgcctccattatgtttcgctaagtttgatttagattaatgagtggattatatcacgaattatcgatttgattttaagaataaattaaatagtttaaaatataaagttattagaagcaatacgatataaggattttttttagaaaatatatttttgaagagtaaaataaaatatattttaataatccgatgaataaattgaagagagcatggcctaatcaccgtaaactttccttaaagaaacttagttgtcatatagtagtacctcttaacaaatatataataatacattaaatgcatacatcaaaatataggaatctaattatgagcaatgccaatactattggtaaccgaatttgtttattccagttcttgttgtggatattttttttcacaaacacgcaaaaagattacatgtcaatatattagaaaaaaatagtttttattacacaacgcaattggccagacatgcctatctcagggaaagaaagaaaaaaacaaaaagctgcagctaggaaaaagaaaatattataattcaattcttatccttccgagtttttgtttattgtggatatattagctttggacttaaattttgcaagatgctagaatcttatcataccaattttcgttaacttttttatagaaaaaattctaattaatttgatcaacatttgagaaatgagaattaaaatgatgcagtaaaaatccagttggccagtaattaattaactcatgtatcattttttccccttacttcctcaggcgcagcagcagcagcagcagccacctccaccggcgcagcatggcgcatgcgtgaagaggccggcgatcgggccgcctccggggttcgccggcgtccgccagccaccgcagaagcagcagcagctgccaccaccaccacggcggagggcgcagcagcagccggcgagcgccgccgcccatcaccgcaacccgaaccgccaccacctgtccggcgtcgccgcgccgcccgcggcggcggcaaacgccctgtcgatcatgaggaaggcggcggccgccggcggtggcggcgccgccctgtactgcggcgtgtgcaacgtgaagtgcatgacgcggttcaacctgagggagcacgaggccgggaggaagcaccgggacaaggtggccagcaacgccggcgagaagaacgtccggtgccagctctgcgacgtgctgctcgccagcgagctcaacgtcgcgcagcactacgccggcaagcagcacctccaccggctccgcctcagccgcggccgcggcggcggcggcggcggcggcaatggcgccacgggcgccggagcagcctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0486300, RefSeq:Os10g0486300