Os10g0489800

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Revision as of 08:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0489800| Description = Protein of unknown function DUF1308 family protein| Version = NM_001071456.1 GI:115482655 GeneID:4348969| Length = 2...")
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Gene Name

Os10g0489800

Description

Protein of unknown function DUF1308 family protein

Version

NM_001071456.1 GI:115482655 GeneID:4348969

Length

2662 bp

Definition

Oryza sativa Japonica Group Os10g0489800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19045478..19048139

Sequence Coding Region

19045688..19045895,19046763..19046929,19047262..19047781,19047882..19048138

Expression

GEO Profiles:Os10g0489800

Genome Context

<gbrowseImage1> name=NC_008403:19045478..19048139 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19045478..19048139 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcggtgccgggagctgcacgaccgcgtcgcggcgtccccttccctgcagcggcaccccgcgctgcggtccctcctccgcctcgtcgccgccgagcagcggttcctcgactcgagccggcccgaccagggggcgccgctctccaccaacctgccccacctcgccgcgctgcacctcctcctcgccgcccaccccgccgtgcggtgcccgtcccgcctcgcgccgctcccgggggtcgacttcgcctgcgccttccgctgggcgccgcgcgcggggcgcctcccgccacccgccccgagaagctgctcctcgtcttcgcccgcggcgtcggcgcggaccccgcgcgggggctcgcggaggagttcggggccgtggagatcgacctgctcgtggacttcgtcggcgaggccgaccacgatagcgaggaggaggaggggtgggttagcgtgagcttccacccaaatgaggacatgaggagcttcagggcgttcgagattgacgtcgtggagtgtggtgatgagatgctgtcgtcgccgctgccgccgccgccgccaccgttgccggagatggaggtgaaggagggtagtttgggcggcgagtttagtgtctttgtgaggaagatgaatatgggatcgagggagatggtgaatttggacaccacggctctggttgctatagtgtcagggatcagcaatggtggtgtaggtaagctgatgagcataccggaggcagagaccagggcaaggttcaagtgcaactacaagttcgtcatggatcaggcacattccgaacttcagtctccaatacttgttgagctggggaatgcagtggatggaaagaaatgtatcatatgtgaaaccgttaactcggagtttaaagaaattgttacaatgtgtggtgggcctgaggagcaaacaagatcaagtcagttactgaagcggcttatagttgtcccagacagtccttcagcccgtatgatggatctaccaacgacaaggaagcttgccatgaagaacaaggtggttttcggcacaggtgaccattggcgtgctcccactttgactgctaatatggggtttgtaagagccgtttcacagagtggcatgcctttgttgaccatcgagcacagacctcgcgcgctgattggcttgtga</cdnaseq>

Protein Sequence

<aaseq>AVPGAARPRRGVPFPAAAPRAAVPPPPRRRRAAVPRLEPARPGG AALHQPAPPRRAAPPPRRPPRRAVPVPPRAAPGGRLRLRLPLGAARGAPPATRPEKLL LVFARGVGADPARGLAEEFGAVEIDLLVDFVGEADHDSEEEEGWVSVSFHPNEDMRSF RAFEIDVVECGDEMLSSPLPPPPPPLPEMEVKEGSLGGEFSVFVRKMNMGSREMVNLD TTALVAIVSGISNGGVGKLMSIPEAETRARFKCNYKFVMDQAHSELQSPILVELGNAV DGKKCIICETVNSEFKEIVTMCGGPEEQTRSSQLLKRLIVVPDSPSARMMDLPTTRKL AMKNKVVFGTGDHWRAPTLTANMGFVRAVSQSGMPLLTIEHRPRALIGL</aaseq>

Gene Sequence

<dnaseqindica>2245..2452#1211..1377#359..878#2..258#cgcggtgccgggagctgcacgaccgcgtcgcggcgtccccttccctgcagcggcaccccgcgctgcggtccctcctccgcctcgtcgccgccgagcagcggttcctcgactcgagccggcccgaccagggggcgccgctctccaccaacctgccccacctcgccgcgctgcacctcctcctcgccgcccaccccgccgtgcggtgcccgtcccgcctcgcgccgctcccgggggtcgacttcgcctgcgccttccgctcccgcgccgcctgggtgctcctctccgcgcgcaacccgtcaaggctcgcgtgggccgccgcggcgcccgacggcatccgcgcccgcgtcgccgcggcgctgggcgccgcgcgcggggcgcctcccgccacccgccccgagaagctgctcctcgtcttcgcccgcggcgtcggcgcggaccccgcgcgggggctcgcggaggagttcggggccgtggagatcgacctgctcgtggacttcgtcggcgaggccgaccacgatagcgaggaggaggaggggtgggttagcgtgagcttccacccaaatgaggacatgaggagcttcagggcgttcgagattgacgtcgtggagtgtggtgatgagatgctgtcgtcgccgctgccgccgccgccgccaccgttgccggagatggaggtgaaggagggtagtttgggcggcgagtttagtgtctttgtgaggaagatgaatatgggatcgagggagatggtgaatttggacaccacggctctggttgctatagtgtcagggatcagcaatggtggtgtaggtaagctgatgagcataccggaggcagagaccagggcaaggttcaagtgcaactacaagttcgtcatggatcaggtggtctcacaatgtttacatttcaatatagtagtttgtgctggtgaagaatctagttacatttttgtcttgccatgtgaatcttagttaccattctattgcctgagataggaggtttgtgttattcaagtttctccttgaccaagctgtagaaagattagttcttgatttgggtttccttggaaagatatactactgagcaaaggcttgctggaatctatcagatgttatttaagtaaaaaaaaatggtcagaagaatacatgtttccactggatgatttgtgctaacaaaataactagtgcttataggatgtttccatgcttgtttgcaggcacattccgaacttcagtctccaatacttgttgagctggggaatgcagtggatggaaagaaatgtatcatatgtgaaaccgttaactcggagtttaaagaaattgttacaatgtgtggtgggcctgaggagcaaacaagatcaagtcagttactgaagcggcttatgtaagtattgttagataaaattttcagtgcaagtggtcttcctttcaattaaggagatttgtaggaagtaatttccatccaagcacttcataagtctgaaggaatttattcgttctctttttgcaacatatattttcctttggaatagaaaaattatgcacaaaaacatttagtccaatcactattatggttcccaatactcaagtttgtactatgttattgttaattccgttacacttgttttcacaatgtgaagcttcctttggttcaaacaaaacttattccagtttcttgcttacatgtaagttacattttcagatgcttgcattgggcattctgtactaatccttgtcatgaatgattatttatgtacactgagcaaagcttagaagtgtttagcccttcaccgatttatcgcattgatcaccagtcacttgacactcttgatggttcaccaacagtacaagtaccaaaccatgtagtaacttgctagggctaaacgatcgatgtaacaccatgtagaaaaatgcattagcaatgtcctatggctcctgcttcatttgttaagttggtgccttggtgggatattgtcaaactatgttttattctagcaaccttggttgatgttgtcttgttgatttgtgagaagccccttacgattcacccatacatgaaatcacccatttaacttcattcttgatcatgcaaaacacaccttactccacaagttctatagggggttttatatcctgcaaacattagttttatcacatttcgaataaattggcccctgtgaatgctcttaaattcagttttaatcacacagcctgttacagcgccgttgacagcttggttttgaacctgcagagttgtcccagacagtccttcagcccgtatgatggatctaccaacgacaaggaagcttgccatgaagaacaaggtggttttcggcacaggtgaccattggcgtgctcccactttgactgctaatatggggtttgtaagagccgtttcacagagtggcatgcctttgttgaccatcgagcacagacctcgcgcgctgattggcttgtgacaacctgataaccctgttgtacgttttgccagccaatttgtaaaagtgcatttgtagtcgtagtgttttgctaacaatactccttagatgttccttgttcctagaactgcagttcacttttgttattctacctcagttaagtcttgtacagctaaacacacattttctttagtgatgtactacgcagcatcagcagtttagcacattgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0489800, RefSeq:Os10g0489800