Os10g0494500

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Revision as of 08:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0494500| Description = The start codon is not identified.| Version = NM_001071480.2 GI:297610715 GeneID:4348994| Length = 3766 bp| Definit...")
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Gene Name

Os10g0494500

Description

The start codon is not identified.

Version

NM_001071480.2 GI:297610715 GeneID:4348994

Length

3766 bp

Definition

Oryza sativa Japonica Group Os10g0494500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19251905..19255670

Sequence Coding Region

19251905..19252114,19253558..19253616,19254424..19255510

Expression

GEO Profiles:Os10g0494500

Genome Context

<gbrowseImage1> name=NC_008403:19251905..19255670 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19251905..19255670 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gccgcgggcggggccccggagtccgttacggtcgcgtgccccgaccacctggtgattgccgacctcgccgtggcaaagagcctcggcgccgtcacgacctccgccgtcgcggccgcccgcaccatcggccgccgctcccgccgccccctcggcgagcgcgtccacatctgctgccgctgcgagttccccatcgccctctacggccgcctcattccttgtgaacatgctttctgtttagcctgtgctagaagtgattccagctgctatctttgtgatgagcgcattcagaagattcaaactgtgaaaatgatggaagggatttttatctgtgctgcacctatgtgtctcaagtctttccttaagagatctgaatttgattctcatatacctgaagttcatgccaacctcctgcacaatactccagagagggaagaacgtaatgagccagatgctcctaacatttcccgtgcttctgggggtgatcaaagacaatctcagatgcctgaaatgtctactgcacgtgctcctcctcggactggtgtttcaccctcttcaagttctcatgtgcaagatcgtgatgaccgatctcgctaccaccattccagagaccagaccccacagaggccccctatgctatcaagaccaccatcattccatggtcgtcactcttatccaccaggggatactccaagtgagaacaacccgcctcaaggatttgatcggccctacaactgggctcatgaaaatgcacctggggcgactccagtccgccaagaatcagagcatggtagtcaagacaaacagcaaatgatgcctaatgcgcctttcatgtttcctccaatgcctcatcagccaaacttcatgatgcccatgaatatgaatcagccattaatgtccaacacatcattcaattatcctctccaacaagatggaaatccacagttcttcagtgcccctttccagatgcaactaccagatgttggactggatcaaggctcagcctcgggggtccaacctacgccacctggtcctttaagcttccctgaggggcttcagcgtccatggggcatgggattgatgggcaacccatttcagtcgatgccacttggacagggaatgcctgaaggtgcaggtgaacctcagggaggtggcggaatggttttcctgcaaggtggtttcggagtcatgcctgatggctcaatgaattcaggcataccaggtagggatctttctggccaaggtgaccggggtgttctagcgcagatgcccatgccgatgcaaatgcagatgtcacttcccccacctccccctacacagcccccttcagctggacagcaaacttttagcagaacttga</cdnaseq>

Protein Sequence

<aaseq>AAGGAPESVTVACPDHLVIADLAVAKSLGAVTTSAVAAARTIGR RSRRPLGERVHICCRCEFPIALYGRLIPCEHAFCLACARSDSSCYLCDERIQKIQTVK MMEGIFICAAPMCLKSFLKRSEFDSHIPEVHANLLHNTPEREERNEPDAPNISRASGG DQRQSQMPEMSTARAPPRTGVSPSSSSHVQDRDDRSRYHHSRDQTPQRPPMLSRPPSF HGRHSYPPGDTPSENNPPQGFDRPYNWAHENAPGATPVRQESEHGSQDKQQMMPNAPF MFPPMPHQPNFMMPMNMNQPLMSNTSFNYPLQQDGNPQFFSAPFQMQLPDVGLDQGSA SGVQPTPPGPLSFPEGLQRPWGMGLMGNPFQSMPLGQGMPEGAGEPQGGGGMVFLQGG FGVMPDGSMNSGIPGRDLSGQGDRGVLAQMPMPMQMQMSLPPPPPTQPPSAGQQTFSR T</aaseq>

Gene Sequence

<dnaseqindica>1..210#1654..1712#2520..3606#gccgcgggcggggccccggagtccgttacggtcgcgtgccccgaccacctggtgattgccgacctcgccgtggcaaagagcctcggcgccgtcacgacctccgccgtcgcggccgcccgcaccatcggccgccgctcccgccgccccctcggcgagcgcgtccacatctgctgccgctgcgagttccccatcgccctctacggccgcctcgtatgcacctatagtaaaaccctagctcctcctcatttttcctcattttctatgtgcttgccttttgctagctgtgctgtggtttgaggggaaaaaagttttagttcatcgcaagaagtttaaagtatatatatatatatatagagagagagagagagagagagagagagagagagagagagagagagagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatatatatatatatagagagagagagaaagagagagagagagagagagagagagagagagagagaggttttattaaccacatggcgatgctatctgattacccatttacccatcattcaggaagcagcactaattattgggtagaagaccatttgggagtggttcgatacagttggggcgacatgcagtccggtcaaagtcattttagatgaatgctgtgctttttgttctgctacaatactaatatggtaggagtagcacttggttagaggactctacatagtttgcatgtcaaatatagataatatgctgaattcttgatgctgtgggagtcattgctaaatctagttatgaccttatttccatagtgacagggtctttcatattttttaatattcggagcttttggatttatttgtattggcgattttgtgctaacagtgatacttttgaaagcttgtctgattctagctttggcaaggacataagcaagtgaaacagacttattgtgtgcaaagtatttgtatttgataaccatctgtatctaggattgtcatgatagtttcagtgttatatatttgtctctgtaggcttgaagctaatatatatgattttcctgttgcccgtattactagcctgctatagagtatagacatgaccattaactttatatagttcttttgttactatatgtttggtgaaccctacgatagtgttatgacatctctttttttttcctatttatttcagattccttgtgaacatgctttctgtttagcctgtgctagaagtgattccagctgctatctgtaagcattctcctgaactttctggaacttgatcttgttagtttattgacttattctcagtaggataacatgcagtaacaaagtgatctttctgtatggaatgaagtttctcgtatgatctctgagaattcctgattgatgtgttaatttccttcagttgttaagttttctaccaaaatgagtttcaactgagtagatcataagatatactccctccgtttcaggttataagatgttttgactttgctcaaagtcaaactgcttcaagtttaactaagtttgtagaaaaaataataacattttcaaccaagacaaatttattatgaaaatatattcaattattgatttaatgaaactaatttagtattataaatattactatatttgtctataaatttagtcaaatttaaagcagtttgactttgaccaaagtcaaaacgtcttataacctgaaacggagggagtattatagtatgcatgaatttcaaatggtttggtactactaataaactatggcttgtttgcattctgttattgctttcatgggatgtgttaatcttttacatcaatagctatggacactgggtaagcagtgatacacttcatgttgctgtctgccttggaatgctactttttgtgtctcttcgccaatcaaatgttgcacatgctcataagatttttcaagaaatattgcactaaaagtgagaaatcttactagctagcattgttatcttctagtattttgttacagatcaacttggtttggcgcctgccacttttaaacttttgttaacctatttttttcagttgtgatgagcgcattcagaagattcaaactgtgaaaatgatggaagggatttttatctgtgctgcacctatgtgtctcaagtctttccttaagagatctgaatttgattctcatatacctgaagttcatgccaacctcctgcacaatactccagagagggaagaacgtaatgagccagatgctcctaacatttcccgtgcttctgggggtgatcaaagacaatctcagatgcctgaaatgtctactgcacgtgctcctcctcggactggtgtttcaccctcttcaagttctcatgtgcaagatcgtgatgaccgatctcgctaccaccattccagagaccagaccccacagaggccccctatgctatcaagaccaccatcattccatggtcgtcactcttatccaccaggggatactccaagtgagaacaacccgcctcaaggatttgatcggccctacaactgggctcatgaaaatgcacctggggcgactccagtccgccaagaatcagagcatggtagtcaagacaaacagcaaatgatgcctaatgcgcctttcatgtttcctccaatgcctcatcagccaaacttcatgatgcccatgaatatgaatcagccattaatgtccaacacatcattcaattatcctctccaacaagatggaaatccacagttcttcagtgcccctttccagatgcaactaccagatgttggactggatcaaggctcagcctcgggggtccaacctacgccacctggtcctttaagcttccctgaggggcttcagcgtccatggggcatgggattgatgggcaacccatttcagtcgatgccacttggacagggaatgcctgaaggtgcaggtgaacctcagggaggtggcggaatggttttcctgcaaggtggtttcggagtcatgcctgatggctcaatgaattcaggcataccaggtagggatctttctggccaaggtgaccggggtgttctagcgcagatgcccatgccgatgcaaatgcagatgtcacttcccccacctccccctacacagcccccttcagctggacagcaaacttttagcagaacttgatgattatttatgtacggtaatttaattgttgctgtcaaaattggattgtacttatcgagaaaacggtggtctcatcattctgcgttgctgatgagaaatgtgttgtgccatgaacgatcatatccctaatgaaattcctattgagatcgaagttttcatg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0494500, RefSeq:Os10g0494500