Os10g0494300

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Revision as of 08:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0494300| Description = Similar to ABC transporter| Version = NM_001071479.1 GI:115482701 GeneID:4348993| Length = 5673 bp| Definition = Or...")
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Gene Name

Os10g0494300

Description

Similar to ABC transporter

Version

NM_001071479.1 GI:115482701 GeneID:4348993

Length

5673 bp

Definition

Oryza sativa Japonica Group Os10g0494300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19242092..19247764

Sequence Coding Region

19242206..19242652,19244041..19244330,19244723..19244894,19244990..19245112,19245214..19245342
,19245443..19245637,19245766..19245852,19245945..19246217,19246429..19246536
,19247151..19247498

Expression

GEO Profiles:Os10g0494300

Genome Context

<gbrowseImage1> name=NC_008403:19242092..19247764 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19242092..19247764 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagaagcagggaggaggaggaggagtagcggcggcggcggtggcggcggcggggatggtgaaggcggagctggaggacgtggggatcaaggcggcgggaggggcggtggcggcgctgagcccgctgagcgagacgctgtggcgggagaaggcggcggcggagttcctcggcgacgtgtcggcgcgcctggcgtggcgcgacctcaccgtcaccgtcgtgctcggcggcggcggcggcggcggcggaggagggacgacgcaggacgtgctccaggggctcacggggcacgccgagccgggcaccatcacggcgctcatgggcccctccggctccggcaagtccaccctgctcgacgccctcgccggccgcctcgccgccaacgccttcctcgacggcaccgtcctcctcaacggccgcaaggccaacctctccttcggcgccgcggcctatgtgacccaagatgacaacttgatcggcacattgacggtgagggagaccatctcatactcggcgcggcttcgccttcccgacaagatgcccatggaagagaagcgcgcccttgtcgagggcacaatcgtcgagatggggctgcaggactgcgccgacacggtggtcggcaattggcacctgaggggaatcagtggtggtgagaagaggagggtcagcattgcccttgagatactgatgaggcccaggctgctcttcctggatgaaccaaccagtggccttgacagtgcttcagcgttcttcgtgacacagacactgcgtgggctagcgagggatggcaggacagtgatagcatcgatccatcagccgagcagcgaggttttcgagcttttcgaccgcttgtatctcctttcaggaggcaaaactgtttactttgggctggcctctgaagcttgtcagttctttgcccaagccggcttcccttgcccaccgctgcgcaatccatcggatcatttcctcagatgcataaacgcagacttcgacaaggtgaaggccactctgaaaggatcaatgaagagaagatttgaaagatccgatgacccacttgatcggattatgacttcggaggccatcagaaggctgatcacctactacaagaactcacagtactactttgctgcgcagcagaaagtcaatgagatggcacgggttaaagggacagtgctggatgcaggagggagccaggctagcttttggatgcaggctttcacactcacgaagcgatcgttcatcaacatgtcgcgggacttcgggtactactggctgaggcttatcatctacattgttgtgacagtctgcatcgggacaatctacctcaatgttggcaccagatacagctcaattctggcaagaggtgcatgtgcttctttcgtcttcggctttgtcacgttcatgtcgattggaggattcccgtcttttgtggaagacatgaaggtgtttcagagagagaggctcaatgggcactatggcgtgctggcattcgtgataagcaacacgatctcggcaatgccattcttgatcttgatcaccttcatctccgggacaatgtgctacttcatggtgcgcctccacccgggcttcacgcactacctcttcttcgtcctctgcctctacgcaagcgtcaccgtcgtcgagagcttgatgatggccattgccagtgtcatccccaacttcctcatgggcatcatcatcggtgcaggaattcaggggatattcatgctggtttcaggatacttcaggcttccccatgacatcccaaagccattctggaggtatcccatgtcatacatcagcttccactactgggcattgcagggtcagtaccagaacgacctgaagggcctggtgttcgacaaccaggacgacgagctccccaagatccccggcgagtacatcctggagaacgtgttccagatcgacgtgagccgatccaagtggctggacctcgccgtgctcttcagcatgatcttcatctaccgcctcctcttcttcgccatgatcaaggtcagcgaggacgtcaccccgtgggtgcgcggctacgtcgcgcggcgccgggtgcagggcaagggcgcccgcggccgcggggcggacctctccgccgcgcgctcgccgtcgctccgcgcctacgtcgtcgacgccgccgacgacctgccgccggcctga</cdnaseq>

Protein Sequence

<aaseq>MKKQGGGGGVAAAAVAAAGMVKAELEDVGIKAAGGAVAALSPLS ETLWREKAAAEFLGDVSARLAWRDLTVTVVLGGGGGGGGGGTTQDVLQGLTGHAEPGT ITALMGPSGSGKSTLLDALAGRLAANAFLDGTVLLNGRKANLSFGAAAYVTQDDNLIG TLTVRETISYSARLRLPDKMPMEEKRALVEGTIVEMGLQDCADTVVGNWHLRGISGGE KRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRGLARDGRTVIASIHQPSSE VFELFDRLYLLSGGKTVYFGLASEACQFFAQAGFPCPPLRNPSDHFLRCINADFDKVK ATLKGSMKRRFERSDDPLDRIMTSEAIRRLITYYKNSQYYFAAQQKVNEMARVKGTVL DAGGSQASFWMQAFTLTKRSFINMSRDFGYYWLRLIIYIVVTVCIGTIYLNVGTRYSS ILARGACASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVLAFVISNTISAMPF LILITFISGTMCYFMVRLHPGFTHYLFFVLCLYASVTVVESLMMAIASVIPNFLMGII IGAGIQGIFMLVSGYFRLPHDIPKPFWRYPMSYISFHYWALQGQYQNDLKGLVFDNQD DELPKIPGEYILENVFQIDVSRSKWLDLAVLFSMIFIYRLLFFAMIKVSEDVTPWVRG YVARRRVQGKGARGRGADLSAARSPSLRAYVVDAADDLPPA</aaseq>

Gene Sequence

<dnaseqindica>115..561#1950..2239#2632..2803#2899..3021#3123..3251#3352..3546#3675..3761#3854..4126#4338..4445#5060..5407#taggtggtgtttgcttagctagctagctagctccatcactagctctcgcatcgcatgccacggtgagccggtgtcgccggcgtcgtacggacgtagcaagcgagagagggagagatgaagaagcagggaggaggaggaggagtagcggcggcggcggtggcggcggcggggatggtgaaggcggagctggaggacgtggggatcaaggcggcgggaggggcggtggcggcgctgagcccgctgagcgagacgctgtggcgggagaaggcggcggcggagttcctcggcgacgtgtcggcgcgcctggcgtggcgcgacctcaccgtcaccgtcgtgctcggcggcggcggcggcggcggcggaggagggacgacgcaggacgtgctccaggggctcacggggcacgccgagccgggcaccatcacggcgctcatgggcccctccggctccggcaagtccaccctgctcgacgccctcgccggccgcctcgccgccaacgccttcctcgacggcaccgtcctcctcaacggccgcaaggccaacctctccttcggcgccgcggtacgcacgcacacctcgccgccggcgacccgtcgccactgtgctgaactgctgaccgcaacgctaagttaatcagttattagtagtagtacaatagtactaaatactagtaaatactaatcagctttgcttttatatgggattggattctgcttcagaaaatggttttctggattaaaagctgcacattaaactaaagaagtactccctccgtttcacgatgtaaatcattctgtcatttcgcacattcatattgatattaatgaatctaaacatatatatttagattcattaacatcaatattaatatgggaaaagttagaatgatttacattgtgaaacggaggaagtagttcatttcttgaagtataactgcacacagggagaatacttgtagtacaaaagaaaaaaaaaacatggaatatgtgtgtgttctttttgcagtacttcattttcttgaagaagatttatttttttttgtgtgtgtttgattagaatgtgtattgtatattttttttcctttctgttgctttcattacttgggtctttatctgaatcacctgaacaaccgatttcagaatgagaaagaaatgggtcatttttttgttgttgccacgtgccatttcttggaaccttgctgctttctggcttctgcatgtgtttggacagactgcctctctgcagatgtaatttactgcattaataactccctttcatggatatagatcacccatttctggccaagattaattgggggatctggctcaatcaattaactagtttctgcttgttaatttttagataggaaaaaaaaaagctctttcaggtatgtgtttggtaatggagttaacactcattcagtcatctagcttgttggcaaggaaaactaggaacttccccagcagatgggatgtggtttaccagttttttcagaaactatgctcatcaaaaactcatgatctgttgacaatcctgattatttgttgtacatgtagcgtgtgtcaccatgttgtccaaaatcatttctttatgacttaacaggagcttttttaaaagaaaaaacatagtccaaaagaaggttgttgctgatatttttcatgacttgtgcagttgtgcttcatttgtttctgtcaaaactgtcaacctaatatgtaggaagtagtttaacttctgtaccaatcaataactataaagtattatcaaggaaaaaaagagcaaaatttctgtatgtaaaaagttctaccttgtcaaaaatgataaggtgatacctgaagttatgtgcatatattatcttacttcgtctgatgcagtaataatctcaaggtaacaaaagaagttacctccaggctccagcttactgaaagtttcagtaaaatatgtaatttcaggcctatgtgacccaagatgacaacttgatcggcacattgacggtgagggagaccatctcatactcggcgcggcttcgccttcccgacaagatgcccatggaagagaagcgcgcccttgtcgagggcacaatcgtcgagatggggctgcaggactgcgccgacacggtggtcggcaattggcacctgaggggaatcagtggtggtgagaagaggagggtcagcattgcccttgagatactgatgaggcccaggctgctcttcctggatgaaccaaccagtggccttgacaggtaggtactgctattatatttatggcaaatcatttgttattacattaattaatggatcatgcaagcatgccgggtcggccaaaggctggccgaccaatttcattaagattgggagaaaataaagtaaacatttagttacatccaggcccagcatgatagcaatctagctatctagcaagcatgatagcaatctagctgaacttgagatgtggagatttgatttgcacagctctctaccttgctttgctttcaaccagtagtgtttatcaaactcattcctggtataactatcagaaggttactatgccttgtcatttgtcaagtgattgtaattgttacagtagcaattatctgtctaagtaactgatgtgcagatgattaatctgttgcagtgcttcagcgttcttcgtgacacagacactgcgtgggctagcgagggatggcaggacagtgatagcatcgatccatcagccgagcagcgaggttttcgagcttttcgaccgcttgtatctcctttcaggaggcaaaactgtttactttgggctggcctctgaagcttgtcaggtatgtcagttttcacaaactctattaagttgcttctgcaatgctaatatctatatgggttccctgaatcatgtactgttctttgcattttgcagttctttgcccaagccggcttcccttgcccaccgctgcgcaatccatcggatcatttcctcagatgcataaacgcagacttcgacaaggtgaaggccactctgaaaggatcaatgaagagaagagtaagtttcaggattcagtcagtctcctcctagtacctacaactggcactcttacctgtgcatgccttgactgaaattgtgctcacattttgcatacatagtttgaaagatccgatgacccacttgatcggattatgacttcggaggccatcagaaggctgatcacctactacaagaactcacagtactactttgctgcgcagcagaaagtcaatgagatggcacgggttgtaagtaactagattactacagcaacttccccaaacattcaaccacagctagaccattgtaatgcaagctaagaggactcacatggtatttttgttgcagaaagggacagtgctggatgcaggagggagccaggctagcttttggatgcaggctttcacactcacgaagcgatcgttcatcaacatgtcgcgggacttcgggtactactggctgaggcttatcatctacattgttgtgacagtctgcatcgggacaatctacctcaatgttggcaccagatacagctcaattctggtaaaaatttccttcttcagttgtcacttctatttggatgcaaacttacactgaaaagtatctagctaccctgaactgaatacttgatgttaagcttggtgatctgataaaactgtgaaaacaattaggcaagaggtgcatgtgcttctttcgtcttcggctttgtcacgttcatgtcgattggaggattcccgtcttttgtggaagacatgaaggtttgtgtcaccactgaatcaacaaatgggttagaaaagttcttcagattacagcaaaccatgctcacagaatcttttttatgctctttcaggtgtttcagagagagaggctcaatgggcactatggcgtgctggcattcgtgataagcaacacgatctcggcaatgccattcttgatcttgatcaccttcatctccgggacaatgtgctacttcatggtgcgcctccacccgggcttcacgcactacctcttcttcgtcctctgcctctacgcaagcgtcaccgtcgtcgagagcttgatgatggccattgccagtgtcatccccaacttcctcatgggcatcatcatcggtgcaggaattcaggtgaattaattaccatccatcacaacaacttgatcctgtccatctttatcaggcactgtttggagtcctgcaacgcatacaaactgggattaaattttgacactgtacttggaactgcacaacataatgttgatgtttgttaatattctctcatgatcatgacatgcaacaacatttattgaagagaaaaatatcttttggaaatggacaggggatattcatgctggtttcaggatacttcaggcttccccatgacatcccaaagccattctggaggtatcccatgtcatacatcagcttccactactgggcattgcaggtaaaaatttcaactttttttacagctcataaactgaagcaaccagtgaactcaaatcagggtttaaaacaacaaatcaggaaaatttaaacccaagaccaaaaaatcaaaatcaaaattttgtccatgtgttactgctgttacttctgttgtcacaagtacatgtatagaacatgacatgagaaacaacgaatttgagaaatttgaagcaaaaatgggccaatttcaatcttgacaggtttcgtcgatattttccataatttttgtcaatctcttaaactggttatacctctgttgtcagttttcactagtatatgtaatactagaacataaaacaactattgataattatacatgaggaacaataaattcggaaaaactaccagcaaaaaagcggtaaatttgaattttgatgggtttgatcgatatttttcataatttttgtcaatctcttaaactgcttattatacatctgttatcagctttcaccaccacatgtaatagaacataaaacaactatggagaattacacacgagtagcaacaaattcaagcaaaaaatgtgcagattcgaatgtttgactggttttttttttccatctgacattgttgcagggtcagtaccagaacgacctgaagggcctggtgttcgacaaccaggacgacgagctccccaagatccccggcgagtacatcctggagaacgtgttccagatcgacgtgagccgatccaagtggctggacctcgccgtgctcttcagcatgatcttcatctaccgcctcctcttcttcgccatgatcaaggtcagcgaggacgtcaccccgtgggtgcgcggctacgtcgcgcggcgccgggtgcagggcaagggcgcccgcggccgcggggcggacctctccgccgcgcgctcgccgtcgctccgcgcctacgtcgtcgacgccgccgacgacctgccgccggcctgaccacccgtgagacagacacggcttctgaaaactctgaaactctgaactcctcaactgaacaagtggagacagaggaagaaaaagagagagagggagaggctaaaactgaactaaaaaaaaaagaacctgaatatctgatatgataattgtgtgttatagtagtagcaatgcttaattaatcgatcaagctgtgttgttgtattgtattgataattactaatatcaaggtgtatatcagcagctgaatgcaagtttagctagtgctt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0494300, RefSeq:Os10g0494300