Os10g0494950

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Revision as of 08:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0494950| Description = Conserved hypothetical protein| Version = NM_001189292.1 GI:297727714 GeneID:9268531| Length = 3684 bp| Definition ...")
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Gene Name

Os10g0494950

Description

Conserved hypothetical protein

Version

NM_001189292.1 GI:297727714 GeneID:9268531

Length

3684 bp

Definition

Oryza sativa Japonica Group Os10g0494950, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19264990..19268673

Sequence Coding Region

19264990..19265030,19265656..19266147,19266921..19267101,19267170..19267224,19267255..19267374
,19268117..19268247,19268473..19268673

Expression

GEO Profiles:Os10g0494950

Genome Context

<gbrowseImage1> name=NC_008403:19264990..19268673 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19264990..19268673 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtccctccgcctccgccttcgccttcgccttcatcatcatctgacaagcttgtggcaggtgctgctcagtctgcacctctagtacccttacaagagccagatgtttcatccttgggggagtcttttgacaccacatcatcacaagatttgattactgccagtcataacatcattgatgatggctcatctagcacttgcccatccagaattgacaagcctgtggcagatgctacactgtccacatctctgcaagatgtggccctttcgctcttggacgaaattttcgatgataatccacgaacggcgccagataacaccaccactgatggctatctgcaatcagcttcctcatctgttgggtctagcattttggtccgcagttttgtaaattgctaccagctgttctacattagaatagaccccaggggctcttgctggacttaccctgatgtgggtggaccgtttcagagagtagatgaagctgacgatgctatcaagtgctttcttgatgaactgcagcatggagcaaggtgcacacaatcaggtgaattttctcgtgtggataggatgatacatgattgtaaacactatctttatggtccaccaaagagagatcccagttctccgagtagcaagactacctatgatgaaaagcaatacttggttcaagctatattggaccagtataatgatgacaacaaactttttgggaatcatgcatatgaacttgaagatcttgtgagtaggcaattattttgtgagaattcaaaacaaaagggagctgacgatagcagtggcaaactattctttgctgaagtgacacatgtgcaaagaagaatggcctggaaggtcagctgtttctgcaagattgacactgaagttaatgggggtcactgttatggttgcagaaacaaggggactcctcctatgaagcacccccaaaatactaatgcatacgctggtggtcacttggatgtagagcgatatcgtttggtactgacaagcagctccgaggatgaggaatcggaggatgaatcggaggaggagttggggttgtttgaagtggatgatgtggaatcggaggaagaggaggaagaggaagaagaggaagaggaagaggaagaagaggaggaggagactaacatgtggctaagaagggatacattcgataaattcctagatactatgttgaatgagttacaagccgaaggagattag</cdnaseq>

Protein Sequence

<aaseq>MVPPPPPSPSPSSSSDKLVAGAAQSAPLVPLQEPDVSSLGESFD TTSSQDLITASHNIIDDGSSSTCPSRIDKPVADATLSTSLQDVALSLLDEIFDDNPRT APDNTTTDGYLQSASSSVGSSILVRSFVNCYQLFYIRIDPRGSCWTYPDVGGPFQRVD EADDAIKCFLDELQHGARCTQSGEFSRVDRMIHDCKHYLYGPPKRDPSSPSSKTTYDE KQYLVQAILDQYNDDNKLFGNHAYELEDLVSRQLFCENSKQKGADDSSGKLFFAEVTH VQRRMAWKVSCFCKIDTEVNGGHCYGCRNKGTPPMKHPQNTNAYAGGHLDVERYRLVL TSSSEDEESEDESEEELGLFEVDDVESEEEEEEEEEEEEEEEEEEETNMWLRRDTFDK FLDTMLNELQAEGD</aaseq>

Gene Sequence

<dnaseqindica>1..41#667..1158#1932..2112#2181..2235#2266..2385#3128..3258#3484..3684#atggtccctccgcctccgccttcgccttcgccttcatcatcgtatgaatcctctcgcttttcttttttttttttctgtttgcgaccgatccaattaggccttacaaattggtcgatctagtattaggttgcgattggatgtagaggccgggattatcccattttgtaaaaaagtaggttacgaattggtctgataaacgctcggtattggtaattcattccttgggagggaattgggattggtagctcggcaatatttgggtattcattcgttggaggtgatggggattggtacttgctataaaggcttgttttctagtattagcagcagcaggagataagggacataaaataaataaaactgggggatcagtatggatttctatcgaatttgtgctaccagttcattacagatttcttactcagcttagggtgtgtttagttaacgccaaaattggaagtttggttgaaattggaacgatgtgacggaaaagttagaagtttgtgtgtgtaggaaagttttgatgtgatggaaaagttggaagtttgaataaaaaatttagaactaaactcggccttacttaggcattgctcagtgatcgattgttcttggatgtgaattttttgtaggatatactatgtactcactgtgcttttctccattcagatctgacaagcttgtggcaggtgctgctcagtctgcacctctagtacccttacaagagccagatgtttcatccttgggggagtcttttgacaccacatcatcacaagatttgattactgccagtcataacatcattgatgatggctcatctagcacttgcccatccagaattgacaagcctgtggcagatgctacactgtccacatctctgcaagatgtggccctttcgctcttggacgaaattttcgatgataatccacgaacggcgccagataacaccaccactgatggctatctgcaatcagcttcctcatctgttgggtctagcattttggtccgcagttttgtaaattgctaccagctgttctacattagaatagaccccaggggctcttgctggacttaccctgatgtgggtggaccgtttcagagagtagatgaagctgacgatgctatcaagtgctttcttgatgaactgcagcatggagcaaggtaaagtttcttcttgaatttgttgtagctcattcatttaattctccacagtaagcaacggtgtttggtcagtgtactttaacttgactaggtagtttgcatgcattgtttctactcatggtgctcatgtattactcttcatataaaggtattgctttacagtcttaattttgtttcatcaaattagttaagaacgcagcaaatatacttaactttggagtaatagaaagcctaagagttgataaaaaaaaaaaccaggttgcatctataatatgtggtcctattatgacaatgatgaagttagcgaaactatcctctgttattatttttgccagggagtactaatcgtaacccataggcatgacagtaagtccacaaagtaaatatatactatactatgctttgtttaaggtatgttttaatctgaattgtaatgtaagttgattacaaacacacacagttctgttgtctgctgtatcaaataattgcgataaccgtatcaattagcctgattgataacttataggcatggagattgtacatgttcaattctcttatcttgttataatttcaaggacacttttttattactcaatcagtgataacataggtacctgggagtttcatccttgctcagtaactttctacacaaactcttcctaaccctacattggacctataaccatttagacaacttagtgtcacttctatattccccactttgaattctccactgaagtactaatagtgtggcgtgctctgatctgaattaggtgcacacaatcaggtgaattttctcgtgtggataggatgatacatgattgtaaacactatctttatggtccaccaaagagagatcccagttctccgagtagcaagactacctatgatgaaaagcaatacttggttcaagctatattggaccagtataatgatgacaacaaactttttggggtatactccccccccctctctctctctctctctctctgatgcaatttttggtaatgttattgttgtagaatcatgcatatgaacttgaagatcttgtgagtaggcaattattttgtgagaattgtatgtggtattgtcatttcaatttcacagcaaaacaaaagggagctgacgatagcagtggcaaactattctttgctgaagtgacacatgtgcaaagaagaatggcctggaaggtcagctgtttctgcaagattgacactgaagttaatggtattcatacttttctcttaaactatcttctaaattcacattgtagtggttattggtacacttacagtttacctcaaacataaatctggattgaggaatatttgtttatctactctgtagactatactgaattcatatgttgcattctgccttttgcttagcacctatgctctatatattgcattacacactgttggaactcaattcattagacccattgaatgtatatttttacgatagcatttgtatatttgctgctgaatgtaggatatgatttccaattatttattaaactgaagtcagtttatttgccgttatgttcgagtacagtgtcattcatgacccttgcggtagtgtaaaaacctctagcaagtagcgtacaaattcctcgacctcatcaacctgagaactttgtgactatgtgttaacatctgttcttgcatggctgctgaagcgccaactcttctgttagatatattttcaaaactttttctgctgaatatagaacatcatccgcaattcctattacactaatttggcagttttgctttcccattatgttacgttacagtagttcatgtcatacatgcttgtacaatatcttaaactgtttcatgtacaggcctctatattggttgcatatgtcgtttttcgtttccttcaattactcggatgtacatctgcttgtgcatggttggtgatttggcagttacttgacaaatgcatttttttctctgtaaagggggtcactgttatggttgcagaaacaaggggactcctcctatgaagcacccccaaaatactaatgcatacgctggtggtcacttggatgtagagcgatatcgtttggtactgacaagcagctccgaggatgtacggacattcactttcaggactagcatttactccattttaaaataatatatgatgccgctgacttggacataatgtttgagcaatcatcttattcagaatataagatgatcggtcgaacatcatgtatcaaagctaacaatgccatatatctaaaaacggaggtagtaacactttttgctgctttgttgctaattgcatgagctgctttcctcaattgtataggaggaatcggaggatgaatcggaggaggagttggggttgtttgaagtggatgatgtggaatcggaggaagaggaggaagaggaagaagaggaagaggaagaggaagaagaggaggaggagactaacatgtggctaagaagggatacattcgataaattcctagatactatgttgaatgagttacaagccgaaggagattag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0494950, RefSeq:Os10g0494950