Os10g0497900

From RiceWiki
Revision as of 08:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0497900| Description = Lanthionine synthetase C-like family protein| Version = NM_001071498.1 GI:115482739 GeneID:4349013| Length = 2277 bp...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0497900

Description

Lanthionine synthetase C-like family protein

Version

NM_001071498.1 GI:115482739 GeneID:4349013

Length

2277 bp

Definition

Oryza sativa Japonica Group Os10g0497900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19443906..19446182

Sequence Coding Region

19443907..19444182,19444298..19444476,19444597..19444714,19444837..19444953,19445057..19445371
,19445587..19445925

Expression

GEO Profiles:Os10g0497900

Genome Context

<gbrowseImage1> name=NC_008403:19443906..19446182 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19443906..19446182 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggaaacggtggtggtgggaacaagaaggggaggagagactcgccgtcgccgccgctcgagacccccccgcgcggcgagttgccgtcgacgtcgtcgtcctcctcctcgcgcgccaccaagcgtcaccgcgtggcgggcatggcggaccgctacttccccaacgacctcccggacttcgtcgccgaggcccccgacggcggccgcggcttgctgtcgctcccttactccagcctctccgaaaggctcctccgcgccgcgctccggatcaaggacaaggtcatggaggagacgtggaccagggcgcggcgacaggtgacggactacacgctctacacgggcgcgctcggcacggcgctcctgctgttcaagtccttccaggtcaccggcaaccgcgccgacctcgccctcgccggcgacatcgtcaaggagtgcgacgccgcgtcgcgtggcctgccacgcaggttcttgacattcatctgtgggagggctggggtttgcgctcttggtgcagtgattgcaaaacattgcaatgaccagctgctactcacacactacctgagctcatttgatgagataatagtcactgagaaagttcccaatgagttgttatatggaagagcagggtatttgtgggcttgcttgttcttgaatacgcatctcggcgagaagacaattccccatgagcacattacttctgtggcaaaggacatcatcgatgagggaagaaagctggctaaaaaggggaactgccccctgatgtatgaatggcatggaaagaagtactggggtgctgctcatgggcttgctggcattatgcatgtcctcatgcacactgaactcaagctagatgagaaggatgatgttaagaacactctgctatacatgatcaggaacaggtatcctactggcaactatccatcgagtgaaggcagtgaatctgaccgcttggtgcattggtgccatggtgcccctggtgttgctcttacactcgctaaagcttatcaggtcttccatgatgaacatttcaagcagacggctgcagaggctgcagaagttgtctggaaccggggacttctcaagagagttggaatatgccatggtgtaagtgggaacgcctatgtatttctctcactctaccggctaactggcaatgttgagtacctgtaccgggctaaggcttttgcttgctttctgcttgagaaagctgatcagttgattgctgatggggccatgcatgggggtgatcacccattttcattgtttgaagggagggctgggatggcttacctccttctagacatggttagcccatcagaatcaaagttcccggcctatgagctttga</cdnaseq>

Protein Sequence

<aaseq>GNGGGGNKKGRRDSPSPPLETPPRGELPSTSSSSSSRATKRHRV AGMADRYFPNDLPDFVAEAPDGGRGLLSLPYSSLSERLLRAALRIKDKVMEETWTRAR RQVTDYTLYTGALGTALLLFKSFQVTGNRADLALAGDIVKECDAASRGLPRRFLTFIC GRAGVCALGAVIAKHCNDQLLLTHYLSSFDEIIVTEKVPNELLYGRAGYLWACLFLNT HLGEKTIPHEHITSVAKDIIDEGRKLAKKGNCPLMYEWHGKKYWGAAHGLAGIMHVLM HTELKLDEKDDVKNTLLYMIRNRYPTGNYPSSEGSESDRLVHWCHGAPGVALTLAKAY QVFHDEHFKQTAAEAAEVVWNRGLLKRVGICHGVSGNAYVFLSLYRLTGNVEYLYRAK AFACFLLEKADQLIADGAMHGGDHPFSLFEGRAGMAYLLLDMVSPSESKFPAYEL</aaseq>

Gene Sequence

<dnaseqindica>2..277#393..571#692..809#932..1048#1152..1466#1682..2020#gggaaacggtggtggtgggaacaagaaggggaggagagactcgccgtcgccgccgctcgagacccccccgcgcggcgagttgccgtcgacgtcgtcgtcctcctcctcgcgcgccaccaagcgtcaccgcgtggcgggcatggcggaccgctacttccccaacgacctcccggacttcgtcgccgaggcccccgacggcggccgcggcttgctgtcgctcccttactccagcctctccgaaaggctcctccgcgccgcgctccggatcaaggacaaggttaggcatgcgtgtgcctcggtttgggtttgggtttgggtttgggtggcgcgcgcgcgcacgcacgcaaggtgttcggctgatttcccccgaccgctccctgccccccccgcaggtcatggaggagacgtggaccagggcgcggcgacaggtgacggactacacgctctacacgggcgcgctcggcacggcgctcctgctgttcaagtccttccaggtcaccggcaaccgcgccgacctcgccctcgccggcgacatcgtcaaggagtgcgacgccgcgtcgcgtggcctgccgtaagacgacgagccttttttttgttttcgttctgtacttctgttggttagataatcttgtactaccagttgatgagttgatacacctgggtgtcatggcctccttggtgttaaattaagacgcaggttcttgacattcatctgtgggagggctggggtttgcgctcttggtgcagtgattgcaaaacattgcaatgaccagctgctactcacacactacctgagctcatttgatgaggtgaggagccaatgcatgtgttcacatttctgtcctaatgtgctccatggctgtaaaacagcagatgttatgtctaaattctaacattgtagactgagctatctttgtttgtacttctgtagataatagtcactgagaaagttcccaatgagttgttatatggaagagcagggtatttgtgggcttgcttgttcttgaatacgcatctcggcgagaagacaattccccatgagcacattgtatgtctgtactgcgattctgttattttctttcatattgtcagttccatagtgctatagaaagcatcttacctaattttgtgaaattactgcaactgtgtagacttctgtggcaaaggacatcatcgatgagggaagaaagctggctaaaaaggggaactgccccctgatgtatgaatggcatggaaagaagtactggggtgctgctcatgggcttgctggcattatgcatgtcctcatgcacactgaactcaagctagatgagaaggatgatgttaagaacactctgctatacatgatcaggaacaggtatcctactggcaactatccatcgagtgaaggcagtgaatctgaccgcttggtgcattggtgccatggtgcccctggtgttgctcttacactcgctaaagcttatcaggtgactgcctacatcacatcattaaagtgtgtacacatgtttatccaaagcatctatgtgtacttatcttggtggttgtgcaatatgcatacatggtgtagctttgttttctgcatcaacaaaaatgtcagcgatttgacatcttgtgaaattcttggttgaagattagattccgcgtgtgatccaacatagataactgaatgtttctacttcaggtcttccatgatgaacatttcaagcagacggctgcagaggctgcagaagttgtctggaaccggggacttctcaagagagttggaatatgccatggtgtaagtgggaacgcctatgtatttctctcactctaccggctaactggcaatgttgagtacctgtaccgggctaaggcttttgcttgctttctgcttgagaaagctgatcagttgattgctgatggggccatgcatgggggtgatcacccattttcattgtttgaagggagggctgggatggcttacctccttctagacatggttagcccatcagaatcaaagttcccggcctatgagctttgaagggcatcataaatatatgtatcctgttaggatcaaatgctcagtgatccatccatccaaagtagctgtattgtgttttcttgcgtacccagtaatgtgtgcattgtaatttgttgtctttgtaaagttcagtatccagatggtgcaagcttgaacctttgtaaaatacatgtttgagggagttccttgaaatatgataatatttatgttggttgttgcctctatttgtttactgaataaaatatagttttgcctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0497900, RefSeq:Os10g0497900