Os10g0503200

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Revision as of 08:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0503200| Description = Similar to Dihydrofolate synthetase /folylpolyglutamate synthetase| Version = NM_001071531.1 GI:115482805 GeneID:4349...")
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Gene Name

Os10g0503200

Description

Similar to Dihydrofolate synthetase /folylpolyglutamate synthetase

Version

NM_001071531.1 GI:115482805 GeneID:4349049

Length

5201 bp

Definition

Oryza sativa Japonica Group Os10g0503200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19658783..19663983

Sequence Coding Region

19659096..19659155,19659597..19659706,19659834..19659989,19660117..19660195,19660328..19660570
,19660641..19660805,19660942..19661019,19661167..19661213,19661301..19661361
,19662146..19662229,19662367..19662427,19662609..19662718,19663274..19663339
,19663429..19663556,19663675..19663960

Expression

GEO Profiles:Os10g0503200

Genome Context

<gbrowseImage1> name=NC_008403:19658783..19663983 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19658783..19663983 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcgcgagcggcgccgcgagcccaccaccatcctccgccaccaccaccaccaccaccaccacgctactagtaccctcctcctccgtcgccatgccgccccctcgcctcgcccacctccgccgccgcagcagcagcctcctcctcctccaccacaaccaccaccaccaccgcggcggcggcagcgcccctccccaccctctcctgcgcccgccgccgccgccgcagtcccaccccttccagctcctcaccccgcgcgccgccatggccagcgtcgcgcagccaggagtcgcggcggggtcggcggagtacgaggaggtgctggggtgcatctcgtcgctgatcacgcagaaggtgcgggcggacaccggcaaccgtgggaaccagtgggagctcatggccaagtacctgcagatactggagctggaggagccgatcgcgcggttgaaggtggttcatgtcgcagggacgaaagggaagggttcaacatgcacatttgccgagtcaattcttcgatcatgtggtttccgcactgggttgttcacctcaccacacttgatggatgttcgtgagagatttcggcttaacgggttggacatttcggaagaaaagtttataaggtatttctggtggtgctggaacaaactgaaagataagactggtggtgatattccaatgccagcctattttagattccttgcgctgctagcattcaagatattttctgatgagcaggtcaaagcacctgtagtttgtggaatatcttcccttggatatgatcacatggagattcttggaaatacgctaggagaaattgctggggagaaagccggaatattaaagaaaggagttccagcatatacagttccacaaccagaagaggcaatgtctgtactgaagcacagagcttctgaattgggtgttcctcttcaagtagtccagcctttggatccacaacaattggatgatcaacctcttgggctacatggtgaacaccaatacatgaatgctggccttgcagtcgcattggttaatacctggcttcaaaggcaagggcatttcaacatactacataagaagcattctgttaccttgccagatcaattcatcgaagggctgtcaagtgcttgtttgcaaggacgagcacagattgttccagatccggaagtgctgtccaaagacagcagttccttaattttctatttggatggagcacatagcccagaaagtatggaaatttgtgcgaagtggttttcctgtgttacaagaaaggatgaacaacaaccaggccctttggatcagctacatattggcaccaattctaggaagattctcctgttcaattgcatgtctgtaagagatcctcaaagactgcttccatgtcttctagctacatgtgcccagaatggactccagtttgatcatgccctatttgtgccaaatcaatctcaatacaacaagcttggttctcatgcatcaccaccttcagagcgtgtgcaaatcgatctgtcatggcaattatcacttcaaagagtgtgggaaggcctgcttcatagcaataaaggtctaaatggttcaaactccagtacagctagttctgtttttgaatctcttccattggcaatcaaatggctaagggaaactgctcaacaaaaccaatctacttcatatcaggtcttagttactggctccctgcatcttgttggtgatgtattgagattgctcaaggagtaa</cdnaseq>

Protein Sequence

<aaseq>MRASGAASPPPSSATTTTTTTTLLVPSSSVAMPPPRLAHLRRRS SSLLLLHHNHHHHRGGGSAPPHPLLRPPPPPQSHPFQLLTPRAAMASVAQPGVAAGSA EYEEVLGCISSLITQKVRADTGNRGNQWELMAKYLQILELEEPIARLKVVHVAGTKGK GSTCTFAESILRSCGFRTGLFTSPHLMDVRERFRLNGLDISEEKFIRYFWWCWNKLKD KTGGDIPMPAYFRFLALLAFKIFSDEQVKAPVVCGISSLGYDHMEILGNTLGEIAGEK AGILKKGVPAYTVPQPEEAMSVLKHRASELGVPLQVVQPLDPQQLDDQPLGLHGEHQY MNAGLAVALVNTWLQRQGHFNILHKKHSVTLPDQFIEGLSSACLQGRAQIVPDPEVLS KDSSSLIFYLDGAHSPESMEICAKWFSCVTRKDEQQPGPLDQLHIGTNSRKILLFNCM SVRDPQRLLPCLLATCAQNGLQFDHALFVPNQSQYNKLGSHASPPSERVQIDLSWQLS LQRVWEGLLHSNKGLNGSNSSTASSVFESLPLAIKWLRETAQQNQSTSYQVLVTGSLH LVGDVLRLLKE</aaseq>

Gene Sequence

<dnaseqindica>4829..4888#4278..4387#3995..4150#3789..3867#3414..3656#3179..3343#2965..3042#2771..2817#2623..2683#1755..1838#1557..1617#1266..1375#645..710#428..555#24..309#cacgatccggcaaaacgaaaacgatgcgcgcgagcggcgccgcgagcccaccaccatcctccgccaccaccaccaccaccaccaccacgctactagtaccctcctcctccgtcgccatgccgccccctcgcctcgcccacctccgccgccgcagcagcagcctcctcctcctccaccacaaccaccaccaccaccgcggcggcggcagcgcccctccccaccctctcctgcgcccgccgccgccgccgcagtcccaccccttccagctcctcaccccgcgcgccgccatggccagcgtcgcgcagccaggtacgtaacgtaaaccgaagctcgcgagggtttctctctgtcgtgtagttctgggtgtggtgattgattgggatttgggattgattcggtggtggtggtggtggtggtggtggtgcaggagtcgcggcggggtcggcggagtacgaggaggtgctggggtgcatctcgtcgctgatcacgcagaaggtgcgggcggacaccggcaaccgtgggaaccagtgggagctcatggccaagtacctgcaggtgcgctcccgtgggtggagctcgactttggttattgattgctctattggtggtttctgattgggattgattttggttggcgttgctagatactggagctggaggagccgatcgcgcggttgaaggtggttcatgtcgcagggacgaaagggaaggtgagtacactacagcagagagtggctggagggattcacattgctgtgttagagtgatttgaactgatttggacaaaagggaaggtgtgcagtttcagtaatgtatcgcatatttttctgtaaatatgcgcatcaatagtaatagcaaaaccagtggtcggtattagctgcattgtttgcatttggttacctgtgaaatcaagtgggattgctatgtgtggtgcgtacagttttctctagaaactcgcatgtttggtggagctgtccctgcctgagaaatgaggatttcacctaactgacttaattgttaggtttaattctgtctatttagggctacgtgtttgtgtttgctagttgtttgtattggctgtcactgagtgtagtgatgcggtgatgcctgaccaatgtaagcaattgaagattgaagacaccctttagactgattttgtggtgcatatatattgaatagtataccaaagagaatcgtatttcaatatattccaaggagaagtcccactaaaagcactgaaatatcattttcctggtatcgtttagggttcaacatgcacatttgccgagtcaattcttcgatcatgtggtttccgcactgggttgttcacctcaccacacttgatggatgttcgtgagagatttcggcttaacgggtattagttcacttcaatctgccgcattgcgacctttatttgttctaattttttttatatatctttagcttgttataattagattaccagggatttgtagttttgcattaacaactttctttgattattgccatgactgaactcttgtgctctcttaatttcctctctggtgagttcctaggttggacatttcggaagaaaagtttataaggtatttctggtggtgctggaacaaactgaaagtaaggatccctcatttatatgtttcacgtggtgaaagttatggttgtatcatactgactatgggatattgttggatttgcatcattttctataagctttgaaacactcactgtggttaatctgttgtgccttccaggataagactggtggtgatattccaatgccagcctattttagattccttgcgctgctagcattcaagatattttctgatgagcaggtaacattcaaatactttctgtcctaagctttttcaatcctgtagtaaatctagttaagtttatcccagctttctatttaaatggattttgaaaacttcactaatactaatcatcaaaagaatggattttcatggacattgtcccactcaacatatactgaattcgtatatttctcaaagaaaagtcatatcatattatgttagatctttattgaatctaaatggttgctagttctatgatgttttcatcacccttcacttgttatctgcagttcatgtgattagtagaattatgaaatgattagttgtctgataagtttatttacaagcattatcatctttgagtagataatcactgtgcacttcttgaatttaacaattgcacccatgacttccctagcgatttatttaaatccactttctttgttttttggtttaaggtggatgtagctgtgcttgaggttggtttgggaggaaaatatgatgcaacgaacgtggtgcgtgacattttactgtcaaataatgaatggcagtatatttatatggcataactgccaaccaaaaataaagattatatcatctcattttgaccttttagtatgaatgctgaatgtttgtgaagtccacaaaatgttaccatctaggttccgctgtaaaacatgcaaatttgtttgcattttgtgttcaactcatgtcctgttccattgtagcccactgagattgctgccaatatcttggcttgaacaaaaaactgaagagtataatatatttgaaaattttgcaggtcaaagcacctgtagtttgtggaatatcttcccttggatatgatcacatggagattcttggttagttaagaaactgaaggaagaaattcctctcatacataacaaactcacgtcacactatacgtgtttgttttggctgatgagcaggaaatacgctaggagaaattgctggggagaaagccggaatattaaaggttctgtactatttacttttccacaatatttatcaataaataaatatgtgtaacatgttttctttgctctgatatccttcagttaactacttccatagctaaatttatatgttgcttaatccctgtgtagcctctttctaaatgcagaaaggagttccagcatatacagttccacaaccagaagaggcaatgtctgtactgaagcacagagcttctgaattgggtgtatgttatttcctgtgcttcatttttcttttggggtttccaccatgccttgcactctaatgtatccatgaacattgttacaatcagtatagtacagctttttttcattgacacgaacaacttaaattctttaaaggttcctcttcaagtagtccagcctttggatccacaacaattggatgatcaacctcttgggctacatggtgaacaccaatacatgaatgctggccttgcagtcgcattggttaatacctggcttcaaaggcaagggcatttcaacatactacataagaagcattctgtaagtactctagcccaaactggcatgtaaagaaagttaagttcagtaatcaacctaacctggaatgcaggttaccttgccagatcaattcatcgaagggctgtcaagtgcttgtttgcaaggacgagcacagattgttccagatccggaagtgctgtccaaagacagcagttccttaattttctatttggatggagcacatagcccagaaagtatggaaatttgtgcgaagtggttttcctgtgttacaagaaaggatgaacaacaaccaggccctttggatcagctacatattggcaccaattctaggaaggtatgccttgcagttgcagtgagccagtgagaggtctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggctcatatcattgttctttctttcttatgagcactctttgtttgtgatccttgcagattctcctgttcaattgcatgtctgtaagagatcctcaaagactgcttccatgtcttctagctacatgtgcccagaatggtattctaatcaaattcatttcccttgcatagtttaccttttctcactatccaagatcattacatttctattgtgaattgtatgaatgcttttgtttctgaattctgatgagcaatcattttctcaggactccagtttgatcatgccctatttgtgccaaatcaatctcaatacaacaagcttggttctcatgcatcaccaccttcagagcgtgtgcaaatcgatctgtcatggcaattatcacttcaaagagtgtgggaaggcctgcttcatagcaataaaggttgctctaaactgaattgcaataattattattgttcatttattgccagcttgtgttttcttattgaaacaaagtaagttcactgggttgaagatggtatataaacttaaaaattggaacggtgcaggtctaaatggttcaaactccagtacagctagttctgtttttgaatctcttccattggcaatcaaatggctaagggaaactgctcaacaaaaccaatctacttcatatcaggtgaaaacttcttatataccttcatttttgttctcccaattgtttgtatcatgtaggactaatttttcttccaaccatacctagctactgtaccatagtcaggacacagggatatcacataattcattgtcagcttagcacatgtatatgtagttgtgtagtgaccatcactgattcatcattcttgtctcttgtgtacccttccatcccttcgatgtgcttgcgtgtgtgcaactgctagtgaatgcacagttcttttttcttttttggttctgcttttccatgatctggaatacctagtaattgtttatgtgcatgtgtttattttatgtccctttaattatgttatacctgttgttttttatgtttttttgtctctagcaggcagcagctactttcaaaattgatgctgatacatttgcatttgtacactttgaccaggtcttagttactggctccctgcatcttgttggtgatgtattgagattgctcaaggagtaacttcatccagagtgatgcatagttcagattgaaatggctgcttgcagtagcacaagctggccactacaacaatttatgattgggatacaaagcgaaaccacctgattggaacttggaagaattaaagaatgaaagtcgtcttgattcagatactaaccaactgaaaacttgtatttctccaattttcgtgtttctgcctttccaggcagtgtgtgccttgtagtctactgttgttcagaagagtgccacccaattgtggaatgtacaaacattgaataattatatgatgtcactgatgccattttttagactt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0503200, RefSeq:Os10g0503200