Os10g0503700

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Revision as of 08:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0503700| Description = Similar to RNA helicase (Fragment)| Version = NM_001071535.2 GI:297610743 GeneID:4349053| Length = 5424 bp| Definit...")
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Gene Name

Os10g0503700

Description

Similar to RNA helicase (Fragment)

Version

NM_001071535.2 GI:297610743 GeneID:4349053

Length

5424 bp

Definition

Oryza sativa Japonica Group Os10g0503700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19693699..19699122

Sequence Coding Region

19694247..19694325,19694403..19694476,19695372..19695460,19696118..19696298,19696385..19696636
,19696737..19696975,19697662..19697896,19698054..19698114,19698614..19698969

Expression

GEO Profiles:Os10g0503700

Genome Context

<gbrowseImage1> name=NC_008403:19693699..19699122 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19693699..19699122 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaccaccccagggcgcgctacccgcccggctacacctccggcggcggcggcggaggcggaggcggaggaggaggcggccgtggtaatggcggcggcggatttggaggaggtggcggcggcggcggcgggaaccacggctactacggccggggtccgcagccgcagccgcagcagcagcactaccaccaccaggcgcagcagctgcatcagcatcagcagcagcagcagcacgcgcagaggaacagctcctcgcagcagcagcagtggctgcggcgggaccaggccacggcggcggctgcgtccggggaggtcgcggcgaggacggcggcgcagctggaagccgtcgactcgagctctgaagattggaaggcacaattgaatttgccagctccagatacacgttataggacagaggatgtcactgcaacgaaaggcaacgagtttgaggattactttttgaaacgtgaactactaatgggaatatatgagaaaggattcgaaaggccatcacctattcaggaagaaagcattccaatagctctgactggtagcgatattcttgcaagagctaaaaacggcactggcaagactgccgcattttgcattcccgcacttgaaaaaattgatccagagaaaaatgccatacaagttgttatattggtaccaacacgggaactagctctgcagacctcacaagtttgtaaagagcttgggaagtatctgaatattcaagttatggttagtactggtggaaccagcttaaaggatgacattatgcgtttgtatcaacctgttcatttacttgttgggacacctggtcggatactagatctaactaggaagggcatctgtgtgctgaaggattgttcaatgctcgtaatggatgaggcagacaaactgttagctccagagtttcagccttccatagagcaactcatccatttccttccagctaatcgtcaactattgatgttttcagcaacctttccagtaaccgttaaggatttcaaagagaaatacctacctaggccttatgttattaatctcatggatgaactaacactaaagggaattacacaatactatgctttcgtggaagaaagacagaaagttcactgtctgaatacacttttcttgaagcttcaaataaaccagtccattatattctgtaactctgttaacagagttgagctactggctaagaaaatcaccgagcttggctattcatgcttctacattcatgcaaaaatgttgcaagaccatcgaaaccgagtgtttcatgattttcgcaatggtgcttgcagaaaccttgtgtgcacagatctgtttacaagaggaattggcatccaagctgtgaatgttgtcattaattttgacttccctaagacttctgaaacatacttgcatagggttggtcgttcagggagatttggacaccttggtttggcggtgaacttaatcacttatgaggaccgtttcaacttgtatcggattgagcaagaacttgggacagaaataaaaacgatacccccacaaatcgatctggcagtgtattgtcaatga</cdnaseq>

Protein Sequence

<aaseq>MHHPRARYPPGYTSGGGGGGGGGGGGGRGNGGGGFGGGGGGGGG NHGYYGRGPQPQPQQQHYHHQAQQLHQHQQQQQHAQRNSSSQQQQWLRRDQATAAAAS GEVAARTAAQLEAVDSSSEDWKAQLNLPAPDTRYRTEDVTATKGNEFEDYFLKRELLM GIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDPEKNAIQV VILVPTRELALQTSQVCKELGKYLNIQVMVSTGGTSLKDDIMRLYQPVHLLVGTPGRI LDLTRKGICVLKDCSMLVMDEADKLLAPEFQPSIEQLIHFLPANRQLLMFSATFPVTV KDFKEKYLPRPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFLKLQINQSIIFCN SVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIGI QAVNVVINFDFPKTSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIK TIPPQIDLAVYCQ</aaseq>

Gene Sequence

<dnaseqindica>4798..4876#4647..4720#3663..3751#2825..3005#2487..2738#2148..2386#1227..1461#1009..1069#154..509#ctctctctcccgattccgacttcctcctgatccacctccaaagcccacgccacccgcaccgcaccacccaaagcggggggaaacccaaaccggcgaaaccctagatctctctccgctccgcctcgtcgctcccccaaaccctagatccccgccatgcaccaccccagggcgcgctacccgcccggctacacctccggcggcggcggcggaggcggaggcggaggaggaggcggccgtggtaatggcggcggcggatttggaggaggtggcggcggcggcggcgggaaccacggctactacggccggggtccgcagccgcagccgcagcagcagcactaccaccaccaggcgcagcagctgcatcagcatcagcagcagcagcagcacgcgcagaggaacagctcctcgcagcagcagcagtggctgcggcgggaccaggccacggcggcggctgcgtccggggaggtcgcggcgaggacggcggcgcagctggaagccgtcgactcgaggtatgtggattttttacgcggttttccggtaacgctgctttggtgcctgccagctgctagggtttgtgttttgttgttagaagaaagcagagcgtatactgcgtttgggagtgtaggatggcgagattgaggcgtacgagttgatcgcatggattggatgtaatttggggggtttggattgtgcgcatattattcagctattaacagtgttctgtttaagctatttatatggcaatagagggtttgtctctacttgtttgtaatattcatgtttcactagcttctgtgcttgcaggactcctgcttgcttgcccctgcattttttttcttttcagaacccagaaaacacgccatcttgccattttattgcattattaatttattcgggtgttttatatttccttgctgtggggtttgaaataggaaatgttgcatcgaagtcattcttgtggcatctttaataacttcattgatcattattttttttgggctctttcagctctgaagattggaaggcacaattgaatttgccagctccagatacacgttataggacagaggtgaaattctgctgtgtatttgtagtattgtttctactatacatcatcatttacttcgttggtttgagcaaatgttggatggaatatttgaatggtaaccatttgctagtgttatgtggtgctgatgctgtgttctgcaacatatgtttttatgcaggatgtcactgcaacgaaaggcaacgagtttgaggattactttttgaaacgtgaactactaatgggaatatatgagaaaggattcgaaaggccatcacctattcaggaagaaagcattccaatagctctgactggtagcgatattcttgcaagagctaaaaacggcactggcaagactgccgcattttgcattcccgcacttgaaaaaattgatccagagaaaaatgccatacaaggtgagctcttcactcttgtattcttatttataaggaaccataacattaatattttcttgattgctgctcccaacattttaaactgcactgttctttccggcattcatgttgatgcatctcaaattcagaaattcattaattatgggtagtatcttagttgtgtatgctagatccatatgaacttcaaaaattcagtgcactttttgtatactatacttagagggaattattggcatgcaaattgtctgacagtcttttgtacgagaacttatgattgtgtcttagcaaactatttgctctttagcattatctaccgtattgacagacaaaaattatgaacaatgcaacaggcattttcttagctgatcacttcttttgcctttttatggggtgctggtatttcagggtgtctattctcactgagctttctcttgagattcccttgtaaagctggctaccccagctattaatgtaagatttcaattggctatatgaaacttttaaaagggcaatgtttctgtggtgctagttttatacccaccttttatttaatttatcgtttcctactcttttggttccccagctattgccgttcccttcttttggtgaggaatcttttgtctttcatgtttacaaacaatacatactgtttatgactctgttggatctgtggattttatctgcagttgttatattggtaccaacacgggaactagctctgcagacctcacaagtttgtaaagagcttgggaagtatctgaatattcaagttatggttagtactggtggaaccagcttaaaggatgacattatgcgtttgtatcaacctgttcatttacttgttgggacacctggtcggatactagatctaactaggaagggcatctgtgtgctgaaggattgttcaatgctcgtaatggatgaggtatcatgagtagcactcaattagggtcatgcttttgttaatttatatatgtttcaatcacaactatgttataatttttcaatttttttatgatctgcaggcagacaaactgttagctccagagtttcagccttccatagagcaactcatccatttccttccagctaatcgtcaactattgatgttttcagcaacctttccagtaaccgttaaggatttcaaagagaaatacctacctaggccttatgttattaatctcatggatgaactaacactaaagggaattacacaatactatgctttcgtggaagaaagacagaaagttcactgtctgaatacacttttcttgaaggtacagctcaccagaaatcctattttttctgtcttgtccatctttaagcataaattgacataatttcccttctttgttttggtcagcttcaaataaaccagtccattatattctgtaactctgttaacagagttgagctactggctaagaaaatcaccgagcttggctattcatgcttctacattcatgcaaaaatgttgcaagaccatcgaaaccgagtgtttcatgattttcgcaatggtgcttgcagaaaccttgtgtgcacaggttctctaccttttgccttgaatattttctgctatttcagctagtgttctgtagcatatgctgtgttacaaaaatcttgttttacgttatcttctgatatccttatttgttgaataatgtattgtaccatcgttgtattttgacttctcaagcatgggatttgacctctgatttctgagtaaataattttcagaattctttggctagtttattagttacacgaaggcttttgctgcttttgcatgctcttacatcataaaataggctcagaagtagcttccggagcatggaatttactacacatgatacatgagctgccaaagcatgcccactgttctgtgctcataagactaggtaccccccaggctatgtctagactctagaatgctcgtagttcgaatgttccactaatagttaatgcactagaaaataacttgtttggcatgatgtctagagcattttttttcacttgaccttccatgtctacttttttttgtactactattgaaataatgtttggatctagatgtattgtaattgtttcaagccatgattcttgatgtgtgtggtaagtgtatctccttttgtgtgtgcacctatcaggttgacttcttttattacatataaacgattaattaatgtgacatgtctttgcagatctgtttacaagaggaattggcatccaagctgtgaatgttgtcattaattttgacttccctaagacttctgaaacatacttgcatagggtaagttgtttcctcccgttccaaaagaaaatattttcctataatctgtaatcatgtaaagctatcaatatatatatgggttgaatgcttgatcgttctaagctgaatgcttgaatgccaattctcattcagatttgctatacttatgggttttgcttgttcacaaataagaacttcaacacaaaaatcaaatctagggttgcatcttgcatgagtgatggtgatttaccattgtgcagtttgcttttgttactgtaagttggatcttcatgtacacttgtaggcaaggtatttagtatcgagatactaggtaggatcgttttttatttgtagtaccataggatcaggatactatcagattttagaaaatacatatttttatataaaatatgtaatatgttgtataaattaaagtatataatattgattttgataaatctaattggttttcatataaacttgagatatttattcacattattgatatccaccttttttaaaataatattttgtaggattgtagggatcattgaatcgggatactacataagatttcgtaggatcgtgtggaaatgaatagtaagatcgagatactatgaaatttaggatatttggtgggatcggtatcgtttcgacttggtaggatcgtagtatcataaggtggatatgaatcgggatattgacaaccttgcttgtaggtaatataacatttggaacatgtgtttgattatgtttacctgcatgatcttgattaacattaatattttattaatttggctcaatggttggttcactgtgccctttcattttgctgctttgtgtggtctgaactaataaacctggtggttttttatattttgttacttctaaaagctctgtattattttttccttaggttggtcgttcagggagatttggacaccttggtttggcggtgaacttaatcacttatgaggaccgtttcaacttgtaaggatgctttgccagagtagatcctgttgtttactcttgtaccaagattctgacctgttcatcttcctttataggtatcggattgagcaagaacttgggacagaaataaaaacgatacccccacaaatcgatctggcagtgtattgtcaatgatcaatgtaacattgtaacggtgtttttatcatttacttattgttaggcaagtacatcagatgtacatagcacctcatcaggtaagcagtgaatttcttagctgccactctttcaaacaacatgacatattgtttcaggtaataattgaagttcttttgtatacccagggttttatttggtgccttgatgacacatctaagcttatattccattagtgaggaagtgttttctgtcggcactgatactaatcatgttaactgtggacttgcatttttggctgcttgaagacgctgcttgaagacccagggctgcggccaaactgaacctttttcttgctccttgtatctgctcaatatttgctttatattcatttgctagcgacagttttggttgtgttatattaggatactgctgcttgagtctgttaccgtcactgtggttccttaattttcctttcctttttcccttttcttctcatgtttggattggactagtagaagtatttccctcactgtattcctcgtgtcaatttctattatccttggtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0503700, RefSeq:Os10g0503700