Os10g0508000

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Revision as of 08:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0508000| Description = Similar to Monocopper oxidase-like protein SKS1 precursor| Version = NM_001071554.2 GI:297610754 GeneID:4349072| Len...")
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Gene Name

Os10g0508000

Description

Similar to Monocopper oxidase-like protein SKS1 precursor

Version

NM_001071554.2 GI:297610754 GeneID:4349072

Length

5342 bp

Definition

Oryza sativa Japonica Group Os10g0508000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19904778..19910119

Sequence Coding Region

19905396..19905752

Expression

GEO Profiles:Os10g0508000

Genome Context

<gbrowseImage1> name=NC_008403:19904778..19910119 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19904778..19910119 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tgtgtctgtatatggacgaacgtatgcaggaatgggatccagcaccggaagaactgctggcaggacggggtgctgggcacaaactgccccatcccgtcgggctggaactggacgtacgagttccaggtgaaggaccagatcggcagcttcttctacttcccttccaccggcctccagcgcgccgccggcggctacggcggcgtcgtcgtcaacaaccgcgacgtcatcgccgtccccttcggccgccccgacggcgacatcaccatcttcatcggcgactggtacaacaagaaccacacggtaatcaaatcaacacgaaatcaaccgcaatatgaaacattttggacaggtttttga</cdnaseq>

Protein Sequence

<aaseq>CVCIWTNVCRNGIQHRKNCWQDGVLGTNCPIPSGWNWTYEFQVK DQIGSFFYFPSTGLQRAAGGYGGVVVNNRDVIAVPFGRPDGDITIFIGDWYNKNHTVI KSTRNQPQYETFWTGF</aaseq>

Gene Sequence

<dnaseqindica>619..975#atcatcatcttcttcttcttctcgcccagtgagagacactgtgtcagtcactgagtcacactcacagtgccactgatccgccatgagctagctcaagctgagctgcaggaggagtgcagataagagaatccgccttgctttcctcgccgcgcgcattctcgtcgtttcccaaggaagcttcctttcttttcttcttctccggtcagtcgcaatgtggcgggctctcgcggcggcggcggcggcggtggcggtggcggtggtcgtggcggcgcggccggcggcggcgactgacccctacgcgttcttcgactgggacgtcggctacgtcaccgcggcgccgctcggcgtcaagcagcaggcaaaactcgcctcaattattctcctcggtgttcttggctagctcttcgttctcgttgcaagtaaatgtgtaatgtgcactgactatggtttggttggtcgccggcaggtgataggcatcaacggcaagttcccgggaccaaccgtgaacatcagcaccaactggaacgtcgtcgtcaacgtgctcaacgacctcgacgagcccctcctcatcacctggtacgtacgtttatataatcccgtcttgcagcaagtgaataatgtgtctgtatatggacgaacgtatgcaggaatgggatccagcaccggaagaactgctggcaggacggggtgctgggcacaaactgccccatcccgtcgggctggaactggacgtacgagttccaggtgaaggaccagatcggcagcttcttctacttcccttccaccggcctccagcgcgccgccggcggctacggcggcgtcgtcgtcaacaaccgcgacgtcatcgccgtccccttcggccgccccgacggcgacatcaccatcttcatcggcgactggtacaacaagaaccacacggtaatcaaatcaacacgaaatcaaccgcaatatgaaacattttggacaggtttttgattttgagaaggtgaaattttggatggaattcgttgcaggatctgaggaagatgctggacagtggcaaggacctcgggatgccggacggcgtgctgattaacggcaagggcccgtacaggtacaacgacagccttgtcccggccggcatcgagtacgagaccatcaatgtggatccgggtaaaataaaatttttgacgaaactttgggtcctcttctctgtactacggctagttttttacagcgtcaatacgtagtacgtacgtagagtcagtggggtggcattttggcagctggatgagcaggtttcgttgcttttatcatgctgatcgagcactgtgttttctttggattggaatcttgtttcatagtcatagcagtagtactagtaggagtaaggtttagttagttccttcgctttttgtgatagtaaatttggaatttgattgtaggacaaagtgttgtggaagatagtgctttaagccttaaggcagcctgctctgcttactgaagctgtccgctaatgcttaactgacaaaaagttcattctcgtgaattttcaccagttttgtctgctagtagtatatcatgcaatggtttcagttaaacagatcaacgataggagtaaaaatgccaaaattttttttaccgaaactaggatacaaaagatgtgacaacagaagccagagtagtcaatccaacagtaccaaaaatacagactttcagagaccctgtccgatttcatgaaacttgaaactgacgaattgttcactgaatactttcaccctcatgaaaaggatataatcttgtttgcttcatccacaaattgatgcaactactccatccattttatattataagtcgtttgattttttttattaaaattctttagatttaattaagtttatagaaaaaaaacttaaagaagtttaactaacaaaaatataatcaaacgatttataatatgaaacggagaaggttactacctacttacaatgagtctattatcttttgcgcgtgtgtcggcgacgtcggtgtggggacacaggcaagacgtacaggatccgagtgcacaacgtggggacgtcgacgagcctcaacttcaggatccaggggcacaacatggtgctggtggagacggagggctcctacacgacgcagcagaactacaccaacctggacgtccacgtcggccagtcctactccttcctcgtcaccaccgaccagaacgcgagctccgactactacgtcgtcgccagcgcgcgcatggtgaacgacaccgtgtggcgccgcgtcgccggcgtcgccgtcctccgctactccaactccgggggcgggccggcccgctccccgaccctccccaggaccagttcgacaagtccttctccatgaaccaagctcgctccgtcaggtacgagtgaattgcccgacttcgctcattagcttataagtttcgagttaaacttactgtctggttcaactagaaagaaaaaaatggcattactagatttcaggaaattaaaaattctaagtctaaaattgtaggagtagtagtatacaatgtacaattatacttctttttagtacgattttgttgctttattattatctaagtttgaatattttcttaacataaattctgtaaattttatgaattgtaaatttatttcatttaattttatttttttatgtttgaatatgttgttcaaccttttacataagaaaaggaaaataatagttggattgtcctcaaagggatgaaaaactgaaaaattcaatatatgacaatctagatacttaaaaaagaagaaaaattactagcctccatcgttttctttatccaacatcaaccgatgccaaaatttaaattttagaacttcatttaaagtattatcgtttatttctcagcattgacatttacgtcgctaaaatacattataaaaattttacctataaattatttttttaaatacgtggaatgatgtattattcgcattaagcttttgggttttggttttttgcattgggcaggtggaacctgagtgccggagcggcgaggccgaacccacagggatcgttcaggtactcgtcgatcaacgtgacgcaggcgtacctgctgcggagcacggcgccggtgacgatcaacgggcggcgccgcgcgacgctgaacgggctgtccttcacaccgccagagacgccgctgcggctcgccgacgcgtacggcgtcaggggcgtctactcgctcgacttcccggagcggccgctgcgcggcgccccccggatgggccgctccatcatcaacggcacctaccgcggcttcatggagctcatcttccagaacaacgacaccaggatgcagagctaccacatggacggctatgccttcttcgtcgtcgggtaaatacatacccctttcgtcccataaaaaacaaacctagaattaaataatgtgacatatgaaataaaaaacgaacctagaattaaataatgtgacatatgaaatgaatttagactgactcttgaccagattcgttatattaggatatatcgcgtccaattctatgtttatttttctggacgaaggaagtagtagctagcaatggcacaaattagcttgaaagctatgtacatccgccatggctgttcttggagatctttgttaaggtgggtgagcttgaatttcgatgcaggatggactacggcgaatggacggaggatagtaggggtacttacaacaagggtgacggcgtcgcccgcagcactgtgcaggtgagcaaaattggtagagatcatcgtaaaagttgtcaataataccttaaaattgacactagaatagattattcaacaggttattatagcgaattatctactaattttgtttttgaaaactaggacttcattccattctaaaagcatagaacatggtttatcctacggttcattgacctgaagagccgattatctacttgattgtagagaaaaattaaatatattttatgaatgaacttaataaatactattacaacaagtagtttaagcaatacaataggcaattttttttcgaaatcgtatttttcttagatatgtgaagtaaataattcactgtaacaatccaatgaaatagctgaaaacagagtgtaaaaataatcacgttttctaataacttatcaagttgatcaccatctgattgcaaatagcaatcgcactatctctgcacactggtcagtgttcatagtactggagattaaccacaatggagtttagatttgattggattggactggactgtatcttcatgtggtgcattgcgattgcgggtgtggcatatgatttggcaggtgtacccgggagcgtgggcggcggtgctggtgtccctggacaacgtgggcgtctggaacgtgaggtcggagaacctggactcatggtacctgggccaggaggtctacgtcagggtcgtcaaccctgaggacaccggcaacaagaccgagatggccatccccgacaacgccctcttctgcggccagcttcacaagtaccagaagtatggaattttcccaaacccaaatttccttcttttcaaagaaaaaagatcaaacttttgtcagtataatccaatgcacgagatttcttatctcttttttttgtttcccggctctttcttgtgtatatactgctccatccgttttatattataactagttaatcattttcttcaagttttattaagtttataaaaaatataacagcatttataacacaaaacacatgcattatcaaaatatatttaatgttacatctaatgaagctaatttgatgttgtagatgttgttaaatttttctgtaaattttaccaaatataaaatagtttgattaaagaaaaaaaattaaaatgacatataatatgaggtagtatcaaatttctcatgtgttggttggtttgtttcaggcagcagacccctcaccacaagatggggacgtcggcggcggcggccgccgtcgtggggagccgggtggcggcggcagcaatgctgctcctcgccggagcagtcatgatctcgccgtagagtggcgacgtgtttcttctgcaaggaggtgactccgtcgtgtaggattgtttaggatcagggttcaggatcgtagcctgttttctctgttgatatgagtttgtcagtgtgccgcttgattgtgctgcccattgttcgttttcttttcatttttctttttacctcattttgggttcttttagggtgggtagagattgcttcttgattcgattcgttcgtgcatttgcatttgttcaccaggatcaactctggttactccaattctttttggtagtgtaactctgtttgatcgtctgaaaaactgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0508000, RefSeq:Os10g0508000