Os10g0510700

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Revision as of 08:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0510700| Description = Similar to Calcium-dependent protein kinase-related kinase (Fragment)| Version = NM_001071573.1 GI:115482889 GeneID:4...")
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Gene Name

Os10g0510700

Description

Similar to Calcium-dependent protein kinase-related kinase (Fragment)

Version

NM_001071573.1 GI:115482889 GeneID:4349091

Length

6364 bp

Definition

Oryza sativa Japonica Group Os10g0510700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20094873..20101236

Sequence Coding Region

20094873..20094977,20095648..20095749,20095869..20095901,20096488..20096655,20096750..20096812
,20096953..20097063,20097365..20097474,20097589..20097885,20098071..20098149
,20098250..20098358,20098439..20098480,20099182..20099312,20100589..20101236

Expression

GEO Profiles:Os10g0510700

Genome Context

<gbrowseImage1> name=NC_008403:20094873..20101236 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:20094873..20101236 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggcagtgttacgcgaggaacgtgccggtggatggggaggggggaggaggggtggtgacgacgacgacgacgacgaccatctcggtgagcgcgtcggcggcgggggaggaggtggaggtggggagagggggaggagggggaggagggaggaggagcgggaggccgtcgccggcggggacgccgaggaggaggggggcgacgccggcgaggtcgtcggtggcggggagcccgtgggcggggagcccgctccccgagggcatcgcaccgtcgcctgcgccgtcggcgaccacgccgaggcggttcttcaggcggccgttcccgccgccgtcgccggcgaagcacatcaaggcgtccctcgcgcgccgcctcgggcagcggtcgccggccacggcccaggcgcagcaggccgcgaagccgcccgccgaggtcccgatcccggagcacgggggcgggggcggcgccgccgccggggaggtggagcgggagctcgacaagagcttcggctatgaccgccacttcgccgccaagtacgagctggggaaggaggtgggtcgcggccacttcggccacacctgcctcgcgcgtgcccgcaagggcgacatgagaggccaactcctcgctgtcaaggtcatctccaaagccaagatgacaacagcaatatcaattgaggatgtgcgtagagaggtgaaaattctgaaggctttatctgggcattcgaatcttgtcaaattttatgatgcatgtgaggatgcccttaatgtctacataatcatggagttatgtgaaggtggggagttattggacagaattttgtccagaggtgggagatacactgaggaagatgctaaagttatcgttgaacaaatattaaatgttgtttctttctgccatcttcaaggcgttgttcaccgtgatttgaagccagagaatttcctattcagcactagagatgaccattcacctatgaagatcatcgactttggactttctgattttatacggccagatgaaagattaaatgatattgttggtagtgcatactatgttgctccagaagtcctacataggtcatatagcacggaagcagacatgtggagtattggtgttatcacttatatcttgctgtgcggtagcagaccattctgggcacgaactgaatcaggcattttccgctcagtgctgagagctgatcctaattttgatgatgcaccgtggtcttcaatatctcctgaagccaaagattttgtcaaaagacttcttaacaaggattacagaaaaagaatgactgctgcccaggcactctctcacccctggttgcgagatgagtgccgaccgatccctttggatatgctagtttttaagttgattaaggcatatcttcgctctacacctttcaagcgagcggcattgaaggctctgtccagagcaataacagaagatgagcttatctacatcagagcacagtacaacttgctagaaccaagtagtacagatggtcgactatgcattgaaaacttcaggatggctcttttacaaaactctacagatgctatgaaggaatccagagcccttgatatcttgaatgcgttggagccacttgcctacagaagaatggactttgaggagttccgggcggcgacaatcagtccttaccaacttgaggctttatcacggtgggaagaaatagctggcactgcgtttgagtactttgagcaggaaggcaaccgtcccatcacaattgaggagctggcacaggtgcctactgtttctccaaagaagcagccgcagatgggggcagaaggccgcaaatgtcgtagtgtgttttacttttgccggacaatggtacggcgccactttattgttctcaggacaattaacaaatgctttcagtatccgaggctttccctcattcccggtaaccttgagatgcttaacacaactgggctcgcggcagatcacaagaaaaataaggagcccatgctgactatctggtaa</cdnaseq>

Protein Sequence

<aaseq>MGQCYARNVPVDGEGGGGVVTTTTTTTISVSASAAGEEVEVGRG GGGGGGRRSGRPSPAGTPRRRGATPARSSVAGSPWAGSPLPEGIAPSPAPSATTPRRF FRRPFPPPSPAKHIKASLARRLGQRSPATAQAQQAAKPPAEVPIPEHGGGGGAAAGEV ERELDKSFGYDRHFAAKYELGKEVGRGHFGHTCLARARKGDMRGQLLAVKVISKAKMT TAISIEDVRREVKILKALSGHSNLVKFYDACEDALNVYIIMELCEGGELLDRILSRGG RYTEEDAKVIVEQILNVVSFCHLQGVVHRDLKPENFLFSTRDDHSPMKIIDFGLSDFI RPDERLNDIVGSAYYVAPEVLHRSYSTEADMWSIGVITYILLCGSRPFWARTESGIFR SVLRADPNFDDAPWSSISPEAKDFVKRLLNKDYRKRMTAAQALSHPWLRDECRPIPLD MLVFKLIKAYLRSTPFKRAALKALSRAITEDELIYIRAQYNLLEPSSTDGRLCIENFR MALLQNSTDAMKESRALDILNALEPLAYRRMDFEEFRAATISPYQLEALSRWEEIAGT AFEYFEQEGNRPITIEELAQVPTVSPKKQPQMGAEGRKCRSVFYFCRTMVRRHFIVLR TINKCFQYPRLSLIPGNLEMLNTTGLAADHKKNKEPMLTIW</aaseq>

Gene Sequence

<dnaseqindica>6260..6364#5488..5589#5336..5368#4582..4749#4425..4487#4174..4284#3763..3872#3352..3648#3088..3166#2879..2987#2757..2798#1925..2055#1..648#atggggcagtgttacgcgaggaacgtgccggtggatggggaggggggaggaggggtggtgacgacgacgacgacgacgaccatctcggtgagcgcgtcggcggcgggggaggaggtggaggtggggagagggggaggagggggaggagggaggaggagcgggaggccgtcgccggcggggacgccgaggaggaggggggcgacgccggcgaggtcgtcggtggcggggagcccgtgggcggggagcccgctccccgagggcatcgcaccgtcgcctgcgccgtcggcgaccacgccgaggcggttcttcaggcggccgttcccgccgccgtcgccggcgaagcacatcaaggcgtccctcgcgcgccgcctcgggcagcggtcgccggccacggcccaggcgcagcaggccgcgaagccgcccgccgaggtcccgatcccggagcacgggggcgggggcggcgccgccgccggggaggtggagcgggagctcgacaagagcttcggctatgaccgccacttcgccgccaagtacgagctggggaaggaggtgggtcgcggccacttcggccacacctgcctcgcgcgtgcccgcaagggcgacatgagaggccaactcctcgctgtcaaggtcatctccaaagccaaggtctgaccattcgtgatctcactctcctctctctctctctctctcaaaaaaaaaaaaaagaagtgcacaatccatcgaatttctttagacttagctcgtacatagagtcgccactttgctatgatccatcgatgagttttatgatggatcaggattggtggtttggtttggcagcaagtatttagccacctggtaattccatcagcagacattgcaacagcgatttaatcatttgcttgttaggataagttgagcattgagattggagtttgtattcgtaatcgtgctggcatttcttgtggggggtagaaagtgcattgtggatatcttgttttcagcattcctacatttaatgttttgtctgcttttgtgatctgatcatatatccatctgccatactgctacctgtttcttgttctcttgttcattatttaacaaaatgtggggtcttggtatgttgtatatacagtgttcgattatgctaagaagtgactgcgttctgtatgattcccagatagcttggcaaatagtgcattgtagctggagtagtttcaaaatgttggttcactgtaaaagagtttagggctacttaaatccatagtggggcgctttgatatgattggagctagaggataagaaaatttgtgtggtgaataagtatcttctatattttggttccttagttgagtaatcttgataataagatgattgtccttgaaatcacatgtattactgaattagacactgttcaatctttatttcctgtttctttatgtcagcccaacaaattgccgccaaaatctagtatacattgtcataacaaatgtacgtacacgtatatgtgcacgagagcattgatgtttcttgtgcatgtaaacacattttgatcgagcattattacttgcattgttattgactattccatttcacaacaattttattcactgcagaagactacttccataaattactgagccccaatcatatttattgtttaatgtagttcaattctttcgtattttgttctatttgcatctcatgtaattgcattcctttctgtaatatatatagtatgtatcagcatgtcggcaatggtttctttttacacaagtacctaattttaatgcttgaacaagtatctaataggatgatcaatcagttagcacaaattttgtttgcacttggccaaataaaatagaagttctatgggttgtcctattacatattcacatttacctttggaacatgatctcaattttgtgttcctttttatcagatgacaacagcaatatcaattgaggatgtgcgtagagaggtgaaaattctgaaggctttatctgggcattcgaatcttgtcaaattttatgatgcatgtgaggatgcccttaatgtctacataatcatggagtacgtttcttttctttccttaagatattgttgactttccatccttacatagttgattgttttgatctttgtaaagttgctctcaaattcttcttgaagtccaccttttcacgctgaaccaaaaaaaaatgattatatctcaccccgaactatgaaaactagaaataaaaccccaaccctattccagtgattttttttttgattcagatggtagttttactggcacaaactcctaatctcctattaagtaagtttttttttatgcggacctaactaaataggacccatataagcaaaacaatcataacaggagtttacagtttacacaagcgaatgccactacaatgtgataaaaaaatcattgtcgaatgggttcagattgttatttgtccagttgtggaagttggtgggtgaaaaatatgcaggttgtgagtttgcagtgaaaattagacttcaagaacaattcaaaggccaaaatagactttaccgtttgatctttgttgaacctgcggatattccctatgccatttttctagcacataatgtgtacatatgatcaagagcattacaagtagagctgatgtttacttccatcatctaaaagttcagcaaaaatgggcttgctgtctggttacaagtagcctattcttcctcgtaaagttgcatggtgattcatattttattcgtctgttattgaccaggttatgtgaaggtggggagttattggacagaattttgtccaggtattgtatttttcttgagaaacattttctgcaaaccaaaacaagtatttcgctaatacagtgtcgcttgccctttttagaggtgggagatacactgaggaagatgctaaagttatcgttgaacaaatattaaatgttgtttctttctgccatcttcaaggcgttgttcaccgtgatttgaagccagaggtctgtcttctctgtttagtacataaactgaattgtgtttatcttgttacaaatatttttgatatatcccttctaataattctacccttgatcctatcagaatttcctattcagcactagagatgaccattcacctatgaagatcatcgactttggactttctgattttatacggccaggtatttccccccaaaagaattatgcccttccaaagaacttgtgtttcatcttatgttttttttttactctattatgaatttgtcctgacatggtgaaaatactgttttttgaaaccaaatagtgaaaatactcaagtgttttgatgacacacatatttatgattggtcaatgccttcttttacagatgaaagattaaatgatattgttggtagtgcatactatgttgctccagaagtcctacataggtcatatagcacggaagcagacatgtggagtattggtgttatcacttatatcttgctgtgcggtagcagaccattctgggcacgaactgaatcaggcattttccgctcagtgctgagagctgatcctaattttgatgatgcaccgtggtcttcaatatctcctgaagccaaagattttgtcaaaagacttcttaacaaggattacagaaaaagaatgactgctgcccaggcactctgtgagtagtcccagtgattttccttagtttctctacatcagttacagataacatttctttttagtttcagaacaatgttagtagttttcttatgtattatctgtttttctgtagctcacccctggttgcgagatgagtgccgaccgatccctttggatatgctagtttttaagttgattaaggcatatcttcgctctacacctttcaagcgagcggcattgaaggttttgatttcatccttgtaatttctgtagcatgcagtgtcactgcagtacttcatcatatacctcctctgataccaatgctatgaaacttccagcttttttcttgattttcagatagcacaacacacctgtggttgcatgtacatgtaactatacaccatgtagtcccaccttgcataaaatagttttctaggtttaatatacttgatacagggaggtggaatctagtttcttgtatgcataaaatagttttctaggtttaatatactaatccttttattttcccttttcaatgcaacaggctctgtccagagcaataacagaagatgagcttatctacatcagagcacagtacaacttgctagaaccaagtagtacagatggtcgactatgcattgaaaacttcaggatggtaagtgatcttatgctatcaagtcctcgcaatcatgattttgagtaggttgttcacgttctttttttttttgagcatttgaattactgccattgtgacactgagactcaattactcttttcaacatttttactctccaggctcttttacaaaactctacagatgctatgaaggaatccagagcccttgatatcttgaatgcggtatgaaatgcccactcagctcacaatttcattatcttcatataaacatatgctatatgtcattcatttgtatttactttgtattcgatttcagttggagccacttgcctacagaagaatggactttgaggagttccgggcggcgacaatcagtccttaccaacttgaggctttatcacggtgggaagaaatagctggcactgcgtttgagtactttgagcaggaaggcaaccgtcccatcacaattgaggagctggcacaggtatgcaacagaaatattctgagaattgactcaaacatctgattttgtgagacacttatcgaatgcccattttctgcttacaggagatgaatctttcttccgcggcgtattctatcgtccgtgactggattagaccggctgatggcaagcttagctttctaggttataccaaatttttgcatggattgacgatgcgaagtagcaacgcgaggcggcaccattaaattttttgccttgtttgcttgaatagcttccattgctttcattcatgggagtcggagggattgctgctgttttgcctctctttttcgtggcttagcttgtagagaatgcttgtagagaaaaaaaggaaaccgaaagtgaaagttcacaatggagttttagaagaaagaatgtgttttacctttacctgtatgtgttttaccttttacctcttctcatcttggtggttctgataaaagcgttcttgatctggctacctgtggcctgtgggcactgtatagttagctcacacatgatttaactttcttccatgccatctatatttgagtattttgcatgcactatttgcactggtgctacctaggtgcctactgtttctccaaagaagcagccgcaggtaaacatctgatgatgatgttgacaatgatcatgataatgatgtcttaaaatttactttttgtttgctgtgttctttactcgattctaaactgctattgcttgactaatccaatgcagatgggggcagaaggccgcaaatgtcgtagtgtgttttacttttgccggacaatggtacggcgccactttattgttctcaggacaattaacaaatgctttcaggtacgaaaggtacttaggaaaaaaaaaacaaaacacaaacagatcaaggggatgagatatcttactcgctgtctggttgttatactgctcagctgtacattgcaggagatatgagatctttgcctgggatcaacaggcaactgaatttagcataaattcatgaacagaagttcttgccttatgggttgtttgttttcattttagagcatacgaagaagagtggtcgaactgaaaacaggcactacctgcacgtctgtacttgaatgaacaggactagttttaactctttgcggggaagcaccagcaggcttattatgcacacgcaattgcgtttttttataggaatttagtaaggttaggggtttactataagttactgtctcgctaagtctgtgttcttaataggaattcagtttactattaggagacactcgctggttttgttgaaacatagtgtgtgagcatgtgttagggtacacaccggtggatttgtgtgtatatagtggtatgtcttatgaataatcggtaaaaagataaaagtatcaactttttttttgcagaaacaacaaaaagtagtaccatctagttcgttttgttcatagtctatttatgggcttggttgtcaagtttcatacagggcacatttatataaattttgttttcgttgcagtatccgaggctttccctcattcccggtaaccttgagatgcttaacacaactgggctcgcggcagatcacaagaaaaataaggagcccatgctgactatctggtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0510700, RefSeq:Os10g0510700