Os10g0519800

From RiceWiki
Revision as of 08:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0519800| Description = Protein of unknown function DUF295 family protein| Version = NM_001071617.1 GI:115482977 GeneID:4349136| Length = 16...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0519800

Description

Protein of unknown function DUF295 family protein

Version

NM_001071617.1 GI:115482977 GeneID:4349136

Length

1667 bp

Definition

Oryza sativa Japonica Group Os10g0519800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20553651..20555317

Sequence Coding Region

20553738..20555057

Expression

GEO Profiles:Os10g0519800

Genome Context

<gbrowseImage1> name=NC_008403:20553651..20555317 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:20553651..20555317 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgtcacaggtcgcgtcgccgcggcctcgtcgcgtccgccgcgccggcggagggggcagcgactgggcgtcgctcccggcggatctcatgtcctccgtgctcaggcgcctcgccggtgaccgcgagcgcgcccggttcggcgccgtgtgcaaggggtggggggccgccgccgccaggctgccgtcgcggccatggctcgtcgggtcccgcgccgacgactggaccggcctgagcggcgccaccatgtcgtcgttctggctctccctcgggcagcgcggcctcgtgccgttcgccgtcgacgtgcccgccggatctgagtacctgtcctcctcccgtggctacctcgcgctctccaaccccacgggtaaccctagggtgatcaccctcttcaaccccgtcaccggccgccggatcccgctgccgccgatcgggttcttcaagaagtggcacgacgtggccaccattgtgctgtcggctgacccggacacggcggaggcgtggtccgcggtggccgtcggcttcccggcgaactgcctcgcgtactacagctccgccaccaacgactggaagcccatcaggttcaactactcctccggctacgccggcgtcgagcacttcagggggcggttctacgtggcattcaagtcggagatcagcgtgctcgaggttgacgtcgccacccccgccgccattaagatcgagatagcccacgacgacgacgacgaagacgcggacgtcttcgacatcgacctcaacctcgaccacgagacctcgaacagcgacgacgacgacgacgacgacgacgactgcgccgacaccctcgccgggttgggcgacgaggattacccgctcaagtgcctcgtcgagacccacctggtggactgcggcggcgagctgctggtcgtgtcgatgcacgacgaggtggcgtacaagaagccgagcccggaatccgccgtcggccgcaagccccgcagccacgacgacgagcggtgggtggacgtgcacagggtggagtggctggagagcggcgcggcgcggctggtgcgcatggaggacctcggcggctacgccctgttcgtggggcggaaccacgccttctcgctctcgccggaggagttcccggcgtgccagcccaactgcatctacagcgtcgagcagcagggccaccccgacgggctcgtcagggtggtgaacttcaacgacgacacgaccgagtgggcttgccccgacgaggacatcttccccgacgacgacatgcgaggctcgccgacggcaggctgggctcgccgtggctgggtcttccccaaatactcctaa</cdnaseq>

Protein Sequence

<aaseq>MVSQVASPRPRRVRRAGGGGSDWASLPADLMSSVLRRLAGDRER ARFGAVCKGWGAAAARLPSRPWLVGSRADDWTGLSGATMSSFWLSLGQRGLVPFAVDV PAGSEYLSSSRGYLALSNPTGNPRVITLFNPVTGRRIPLPPIGFFKKWHDVATIVLSA DPDTAEAWSAVAVGFPANCLAYYSSATNDWKPIRFNYSSGYAGVEHFRGRFYVAFKSE ISVLEVDVATPAAIKIEIAHDDDDEDADVFDIDLNLDHETSNSDDDDDDDDDCADTLA GLGDEDYPLKCLVETHLVDCGGELLVVSMHDEVAYKKPSPESAVGRKPRSHDDERWVD VHRVEWLESGAARLVRMEDLGGYALFVGRNHAFSLSPEEFPACQPNCIYSVEQQGHPD GLVRVVNFNDDTTEWACPDEDIFPDDDMRGSPTAGWARRGWVFPKYS</aaseq>

Gene Sequence

<dnaseqindica>88..1407#gcttcagttcagattgtactagcaaatctcccccaagtggggaaaaaaaaatttgggacaagaaagcgagaggagaggagagcaaccatggtgtcacaggtcgcgtcgccgcggcctcgtcgcgtccgccgcgccggcggagggggcagcgactgggcgtcgctcccggcggatctcatgtcctccgtgctcaggcgcctcgccggtgaccgcgagcgcgcccggttcggcgccgtgtgcaaggggtggggggccgccgccgccaggctgccgtcgcggccatggctcgtcgggtcccgcgccgacgactggaccggcctgagcggcgccaccatgtcgtcgttctggctctccctcgggcagcgcggcctcgtgccgttcgccgtcgacgtgcccgccggatctgagtacctgtcctcctcccgtggctacctcgcgctctccaaccccacgggtaaccctagggtgatcaccctcttcaaccccgtcaccggccgccggatcccgctgccgccgatcgggttcttcaagaagtggcacgacgtggccaccattgtgctgtcggctgacccggacacggcggaggcgtggtccgcggtggccgtcggcttcccggcgaactgcctcgcgtactacagctccgccaccaacgactggaagcccatcaggttcaactactcctccggctacgccggcgtcgagcacttcagggggcggttctacgtggcattcaagtcggagatcagcgtgctcgaggttgacgtcgccacccccgccgccattaagatcgagatagcccacgacgacgacgacgaagacgcggacgtcttcgacatcgacctcaacctcgaccacgagacctcgaacagcgacgacgacgacgacgacgacgacgactgcgccgacaccctcgccgggttgggcgacgaggattacccgctcaagtgcctcgtcgagacccacctggtggactgcggcggcgagctgctggtcgtgtcgatgcacgacgaggtggcgtacaagaagccgagcccggaatccgccgtcggccgcaagccccgcagccacgacgacgagcggtgggtggacgtgcacagggtggagtggctggagagcggcgcggcgcggctggtgcgcatggaggacctcggcggctacgccctgttcgtggggcggaaccacgccttctcgctctcgccggaggagttcccggcgtgccagcccaactgcatctacagcgtcgagcagcagggccaccccgacgggctcgtcagggtggtgaacttcaacgacgacacgaccgagtgggcttgccccgacgaggacatcttccccgacgacgacatgcgaggctcgccgacggcaggctgggctcgccgtggctgggtcttccccaaatactcctaaggtcggtaagctcaatctggatgccattatgatccaagaggatgctttgcttaattagttgcttcatggctccagtataccataccaaaatcgttccgaacttttgagtttaactacattgcaaacattgcattgtaatttaagttgccaaacatcgatctgtggctgggtttagttcgatcgcaagcattgtgtatgtggccaaacatttggctgggtttaatttagtttcaactttcaagtactgtgaatgagtcgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0519800, RefSeq:Os10g0519800