Os10g0521600

From RiceWiki
Revision as of 08:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0521600| Description = Similar to Ankyrin-1 (Erythrocyte ankyrin)| Version = NM_001189314.1 GI:297727758 GeneID:9266159| Length = 4356 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0521600

Description

Similar to Ankyrin-1 (Erythrocyte ankyrin)

Version

NM_001189314.1 GI:297727758 GeneID:9266159

Length

4356 bp

Definition

Oryza sativa Japonica Group Os10g0521600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20640558..20644913

Sequence Coding Region

20643198..20643243,20643336..20643500,20643588..20643796,20643891..20643962,20644340..20644399
,20644530..20644706

Expression

GEO Profiles:Os10g0521600

Genome Context

<gbrowseImage1> name=NC_008403:20640558..20644913 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:20640558..20644913 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaactctctggggtgctccgcctccggggagaggctggtgtcggcggcgcgggacggggacgcggtggaggcgcggatgctgctggagctcagcccggcgctggcgcggtactccaccttcggcggcctcaactccccgctccacttcgccgccgctaagggccacctcgacattgtgacgctgttgctggagaagggcgcggatgtgaacgtacggaactactgcgggcagactgcgttgatgcacgcatgccggcatggccactgggaggtggttcagatgcttctgctcttcagatgcaatgttaccagggcggattacttgagtggccgaacagcattgcatttcgcagcacatgatggacttgttcggtgcgttcgtcttttactcgcggactttgtcccaagtgctcccttagaggatggtgcttcttcgacggtggatggtggtgaatgtcagacgaatagtgggagcagtccttgttcttctttgggactgaaatttaatgaatctgctcgtttgagatatatcaacaaacctgctgatggcggtgttacagcacttcatatggcagctttgaatggtcattttgattgcatgcaattgttgattgacttgggtgctaatgtgtcagctgtcacattcccgtatggcactacagcaaatttgataggcaactggcagtactcctttgcattatgcagctggtggaggaaatgctga</cdnaseq>

Protein Sequence

<aaseq>MGNSLGCSASGERLVSAARDGDAVEARMLLELSPALARYSTFGG LNSPLHFAAAKGHLDIVTLLLEKGADVNVRNYCGQTALMHACRHGHWEVVQMLLLFRC NVTRADYLSGRTALHFAAHDGLVRCVRLLLADFVPSAPLEDGASSTVDGGECQTNSGS SPCSSLGLKFNESARLRYINKPADGGVTALHMAALNGHFDCMQLLIDLGANVSAVTFP YGTTANLIGNWQYSFALCSWWRKC</aaseq>

Gene Sequence

<dnaseqindica>1671..1716#1414..1578#1118..1326#952..1023#515..574#208..384#acttctctcttctcccacttcccccctcctctcctccggcgtgcggaaaattcgagaccccgaaattccggcaatttcaaacgcgccccctcgccgccggcgagccccagcgcgatcctgagccccggcggtccgtcgccggaggtgttagcctcgtgaggtggctctcgccgtcgccggcgagcggcgtaggcggaggcggcggcgatggggaactctctggggtgctccgcctccggggagaggctggtgtcggcggcgcgggacggggacgcggtggaggcgcggatgctgctggagctcagcccggcgctggcgcggtactccaccttcggcggcctcaactccccgctccacttcgccgccgctaagggccacctcgacgtccgtgacaacccccttcacgccgtcctttgatttctttcgctggtggtttttttgttcgatttgatcgcgaattgatgtgtgtgtgtgtgtgtgtttttttttttttttggtttggttttgcatgcagattgtgacgctgttgctggagaagggcgcggatgtgaacgtacggaactactgcgggcaggtagatctttgggggatattatgggggttgatccttgtgttttagtgctatttcgtgcgtaggaatcgaattaatgtgagatctatcgtctagaagtaatggaattagaagttcttatgtcgtatctcaagtaaaaggagtgtgaagattcagtcttttggttgatttcttagctctatagttagctatggatacataaatttatttgtaatctgtggacctgagcaaggtttgagtcttttagtgccttctgaggctcctgctctatgcttacacactggtataggtgttccatttctattcatccattttatctttatccgagttggaacattttgttgatatttttcttcgtttatttggaatggtggatgaagactgcgttgatgcacgcatgccggcatggccactgggaggtggttcagatgcttctgctcttcagatgcaatgtatggtattgtagcgtggcatttcttgttagttccatattttctgacacatggaaggtgctgacctctctgtgtgtttgggtggcttgtgaaggttaccagggcggattacttgagtggccgaacagcattgcatttcgcagcacatgatggacttgttcggtgcgttcgtcttttactcgcggactttgtcccaagtgctcccttagaggatggtgcttcttcgacggtggatggtggtgaatgtcagacgaatagtgggagcagtccttgttcttctttgggactgaaatttaatgaatcgtatgtattttcaaacgagtattggttttatcctgtctgaagcagctaacagttaatgtcttgtcacatttcttatttttcttttagtgctcgtttgagatatatcaacaaacctgctgatggcggtgttacagcacttcatatggcagctttgaatggtcattttgattgcatgcaattgttgattgacttgggtgctaatgtgtcagctgtcacattcccgtatggcactacagcaaatttgataggcaagtcataattcttggcttcagcttgcatgcattaaataatgatatttttgttatctcaaacggaattatatttacgtgtttatggaacaggagctggcagtactcctttgcattatgcagctggtggaggaaatgctgagtgttgccaggtcagttgccgccaaaaagcaaatcgctttttttgcgcaagtacctttttcagttgtaacggtcggttgtcgcgtaatgaatttatttaatctgaaaattggtgatgccattattgcagctacttctgtcaaaaggcgctagcaagttgacactgaactgtaatgggtaagagttatgtactacctatgttaccggtccaaaatattgatactattactgttgcagttattattagatccacatgaccatctttgtttcatattaacatgtaccctgttgtttaggtggcttcccattgatgttgctaggatgtttggacgccgtttcttggagccattactttctccaaactcaaactcgagtatccctgcatatcaaccatctaattatcttgccttgccattcatgagcatacttaatatagctaggttagtgcttaacaactcactgctcactaatcggttttcttctgatggaagtaaagtataaatataattcttgcttttgtggaaaacaatgagtgctggcttttgatatgtaaacctatgtttatacttttttagaaagcacataaggttgtgatgaaagcagcctcattatacactagcagatccggtacttatcaaaatctttcaggccagattatgtgctctgtagaattgcaataatttcagaaactgttaagttaggaaggtaactacagttttggcttcaatgattttaatcttcattggctcatgggtcatggcacagttaaccttttgttaccttatgaattatgtttggcttccaattacctgaaaccaagcatatttcaatttaacttacaattccaccttggataagaaatgttttttgtttctcttactatataacggtactaataatattatcttcctgtcaaaagattgataatgataaatatatacttattgccttattggaacctttatagattttctctgtgcatttgcagagaatttgggttgctgcacaccgtagcctctgtggatgatagtgatctttgtgcagtttgccttgaaaggtcttgttcagtagctgctgaaggtggggtttacacacttgcaaattcataatttcagtcctttacttactaacggataaatttcagtctgctgtattaactacaagtagaaaatgattatcagatgttcatagttctctctgctctgctcataggttgagaacgttgcttatgttcattttatttgtaaattataatatgcactggcaggtgattgtttgtgtttctatccaaagtaaaacttaatgcatgttagatgttgttagtattctacctgacagaacacctattcagggtaaggatttgccttagcaaattaacgctgttgtaaattgtaattatacctttagtctaccatccaatgaaagggatgttcaattttctagttctgtgcaatttatcgctttcctttatctagtgaaggttctatgcatattatgtaaccgttttgtgaaccacatttttgttcagaaaaaaaatgttagaaaacagtgagagtaaagaaaaaactacctgtattatcctgaaacttgtctgcacggagtgtttggaagcttccattccatatatgctttttttgtatgatttttcactcattcgtgcatatcacgtagtgatgcatcactgaaaaatgtaatgctgccctgacattatattctgttctttcaggttgttgtcatgagttctgcatcaaatgtgctctttatctttgctcaacgagcaatacccgtgttgagttcactggcccacctggatcgattccgtgccctctttgtcggaatggaataatgtcatttaccaagttgccaagcacgccaacagaagggcttaaatctagctcagcactcacgttctgtaatccatgcatgctaaacacccgatctgtagactcaccagcaactatcagcaaagcagaaataaggcgcaaccgtgttgcagctgtctcttcagagctagtctgcccactaacctgcagcccatttccatcgtctgccctcccgacctgcaggtgcagtgacgatgatccatgtgatgccatagaaacacaggatggttccgaggtgcaatctcctcagccatcgcactgcgcaagcatggagatggacaagagggaacagcaggatcttgaccggactagctgctcaggcatgttctggagccgaagaagctgccacagggaggagcagtgtaatgcagagatcaatgcttgattgtttcttctttctggttgttaatatatctggattcatagcagctcaatgtgggagatgagcagcggttattttttttgcctccccagctgtgtttctttcccctatttgcagccaagattttcttgattggtgaagtgaatcctgcagcttttggctgctgtagtttttactgtattgtagcattttggttacaaatgtgtgtcgtccctgtgatcctagatagccccaaaatcaccagttactcctctttgtagctgtatgtaaattgcaggagttggttgggatttgttttctggtaaagatgttgagaatctatgtacaatggcatcagtcatttgccctcttaaatcttaatgataatactatatag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0521600, RefSeq:Os10g0521600