Os10g0521900

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Revision as of 08:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0521900| Description = Rhomboid-like protein family protein| Version = NM_001071629.1 GI:115483001 GeneID:4349148| Length = 2140 bp| Defin...")
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Gene Name

Os10g0521900

Description

Rhomboid-like protein family protein

Version

NM_001071629.1 GI:115483001 GeneID:4349148

Length

2140 bp

Definition

Oryza sativa Japonica Group Os10g0521900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20662627..20664766

Sequence Coding Region

20662713..20663035,20663134..20663297,20663404..20663567,20663704..20663957,20664519..20664630

Expression

GEO Profiles:Os10g0521900

Genome Context

<gbrowseImage1> name=NC_008403:20662627..20664766 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:20662627..20664766 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cggttcttggtcggttcgccatggcagcggcggcggcgaggtacgacgtggagaagggagggaggaagagggagggggaggaggagaggtgcggttcgccggcggcggtggcgcagtacccgcagcgggagggggagagggagtgggtgccgtggctcgtcccggccatcctcgtcgccaacgtcgtcgtcttcgccgttgccatgtacgtcaacaactgcccctcccacgcctctcgcggcggcgcgtgcgtccggattcctccgccgcttctccttccagcctctctccgagaacccgctcctcggcccctcctccgccacattgcagaagatgggagcactggtatgggacaaggttgttcatgagcatcagggatggaggctagtgacctgcatctggctgcacgccggtgttgttcatctgcttgccaacatgctaagcctcgtgctcatcggactcaggctcgagcagcagtttggatacatgagaattggcatcatctaccttgtttctggcattggaggcagcgttctttcatcgctgttcatcagaaacagcatctccgtcggtgcttctggcgctctctttggtcttcttggagccatgctgtcggagcttttcaccaactggaccatatacacgaacaaggctgcagctctagtgacgctcttgatcgtcatcgcgatcaacctcgccatcggcatcctccctcacgtcgacaacttcgcccacatcggagggttcttgactgggttcctcctcggattcatcttcctgatgcgcccacactacggatggatgcagcgatatgtcctgccttcctctgtcaagtacacctccaagaagtacctggcttatcaatggatcttgctggccgtggcctcggtcctagctgtcatcggattcgccgttgggctgtcgatgctcttcagaggggtgaatgctaatgaacgctgccattggtgccactacctgagctgcattcctacctcgagatggacctgcgggaactga</cdnaseq>

Protein Sequence

<aaseq>RFLVGSPWQRRRRGTTWRREGGRGRGRRRGAVRRRRWRSTRSGR GRGSGCRGSSRPSSSPTSSSSPLPCTSTTAPPTPLAAARASGFLRRFSFQPLSENPLL GPSSATLQKMGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANMLSLVLIGLRLEQQF GYMRIGIIYLVSGIGGSVLSSLFIRNSISVGASGALFGLLGAMLSELFTNWTIYTNKA AALVTLLIVIAINLAIGILPHVDNFAHIGGFLTGFLLGFIFLMRPHYGWMQRYVLPSS VKYTSKKYLAYQWILLAVASVLAVIGFAVGLSMLFRGVNANERCHWCHYLSCIPTSRW TCGN</aaseq>

Gene Sequence

<dnaseqindica>87..409#508..671#778..941#1078..1331#1893..2004#accactcgcagccgtttccacttcaccattcaccaacgcaaacgcaaacgcaacgcagcggcggtagacgaagcagcagcaggtagcggttcttggtcggttcgccatggcagcggcggcggcgaggtacgacgtggagaagggagggaggaagagggagggggaggaggagaggtgcggttcgccggcggcggtggcgcagtacccgcagcgggagggggagagggagtgggtgccgtggctcgtcccggccatcctcgtcgccaacgtcgtcgtcttcgccgttgccatgtacgtcaacaactgcccctcccacgcctctcgcggcggcgcgtgcgtccggattcctccgccgcttctccttccagcctctctccgagaacccgctcctcggcccctcctccgccacgtaagtgctttattccttcttctcggagacttgggatgttgttcgtgatgaaatatggggatggttcttgaatcagtagagcgttttcttgtgcacagattgcagaagatgggagcactggtatgggacaaggttgttcatgagcatcagggatggaggctagtgacctgcatctggctgcacgccggtgttgttcatctgcttgccaacatgctaagcctcgtgctcatcggactcaggctcgagcagcagtttggatacagtaagcacagctttctttgagtacaaaattactctccaaaattcactgacacgattagtggagtactgtatctgaatctgaattgacacttacgtttttcttgcagtgagaattggcatcatctaccttgtttctggcattggaggcagcgttctttcatcgctgttcatcagaaacagcatctccgtcggtgcttctggcgctctctttggtcttcttggagccatgctgtcggagcttttcaccaactggaccatatacacgaacaaggtgacattttcgcgcacattttctgcaccagagaagaaaacatgcatcctcacattagtcatatttcaatctgttcatgctgctacatccattcgactggtagctcaatctcatatgtatcgaaattgcaatgcaggctgcagctctagtgacgctcttgatcgtcatcgcgatcaacctcgccatcggcatcctccctcacgtcgacaacttcgcccacatcggagggttcttgactgggttcctcctcggattcatcttcctgatgcgcccacactacggatggatgcagcgatatgtcctgccttcctctgtcaagtacacctccaagaagtacctggcttatcaatggatcttgctggccgtggcctcggtcctagctgtcatcgggtaagcaatttattaagcattacgtcttcacaaagcaaaaccttttttgtttgttatgatcttccactgattatgccgtacaaaatggagcccaatacggcaataccaatcaccatcatcctgcttgtaactgaagcagttaaactcaattgcaaattgcaagaatcgagactgttttttttattataacattggatcatgtagatttcaatgtgtttggtatctaatttagtcaggtgggcgggcagcagagccgttggtgttgcctcctgcctgtcccatgttcagagattcatgtgaaatccatagagcatttcaatgcagcactagataatcattttccccatgccattgccggccttttgtttcaaggagtaacatgctcaatccagcctaacatgcaacctgctaatatcttattgtgctccagttaatgcaagtcttttgccggccttttgtttcaaggagtatataatactggctatagcatttgtgtcagtatggttggtttgattcaatttttcaagtttgaactgacgattgtgctgctgacctgtgcagattcgccgttgggctgtcgatgctcttcagaggggtgaatgctaatgaacgctgccattggtgccactacctgagctgcattcctacctcgagatggacctgcgggaactgaagatttagtagaaacgcaacaaactgaagacattaaggagatttattgaaagtgtttgatgcacagacatacaattttactgtatataacttatacagacataccctcccaggggtttagtcagttcacttgattg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0521900, RefSeq:Os10g0521900