Os10g0533500

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Revision as of 08:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0533500| Description = Similar to Beta-ring hydroxylase (Fragment)| Version = NM_001071690.1 GI:115483123 GeneID:4349224| Length = 1733 bp|...")
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Gene Name

Os10g0533500

Description

Similar to Beta-ring hydroxylase (Fragment)

Version

NM_001071690.1 GI:115483123 GeneID:4349224

Length

1733 bp

Definition

Oryza sativa Japonica Group Os10g0533500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21199806..21201538

Sequence Coding Region

21199806..21200138,21200205..21200477,21200878..21201003,21201131..21201187,21201449..21201538

Expression

GEO Profiles:Os10g0533500

Genome Context

<gbrowseImage1> name=NC_008403:21199806..21201538 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21199806..21201538 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgtcgcgaggctggtggtcatcacccccgccgtcctcctcggccgcaccgcccgcgtctcgccgtcggcggtgccgcggctgcggcccatcgtcgccggccgccgcgccgtggcggcgcccacacgcgccgtcctgggagacggggcgggtgtcggcggcgaggaggatgcggtggtggcggtggtggaggaggacgcggtcgcccggcgcgcggcgaggaagcggtcggagcggcgcacgtacctggtggcggcggtgatgtccagcctcgggttcacgtccatggccgccgccgccgtctactaccgcttcgcctggcaaatggaggccggcggcggcgacgttccggcgacggagatggtcggcacgttcgcgttgtcggtgggggcggcggtggggatggagttctgggcgcggtgggcgcaccgggcgctgtggcacgcgtcgctgtggcacatgcacgagtcgcaccaccgcccgcgcgacggcccgttcgagctcaacgacgtcttcgccatcgccaacgccgccccggccatctccctcctcgcctacggcctcctcaaccgcggcctcctccccggcctctgcttcggcgcggggcttgggattacgctgttcgggatggcgtacatgttcgtccacgacggcctggtccaccggcgcttccccgtggggcccatcgagaacgtgccctacttccgccgagttgctgccgcccaccagatacatcacacggacaagttcgaaggcgtgccctacggcctgttcctcggacccaaggagttggaggaggtgggtgggactgaggagctggacaaggagatcaagaagaggatcaagaggaaggaggccatggacgccatcagatga</cdnaseq>

Protein Sequence

<aaseq>MAVARLVVITPAVLLGRTARVSPSAVPRLRPIVAGRRAVAAPTR AVLGDGAGVGGEEDAVVAVVEEDAVARRAARKRSERRTYLVAAVMSSLGFTSMAAAAV YYRFAWQMEAGGGDVPATEMVGTFALSVGAAVGMEFWARWAHRALWHASLWHMHESHH RPRDGPFELNDVFAIANAAPAISLLAYGLLNRGLLPGLCFGAGLGITLFGMAYMFVHD GLVHRRFPVGPIENVPYFRRVAAAHQIHHTDKFEGVPYGLFLGPKELEEVGGTEELDK EIKKRIKRKEAMDAIR</aaseq>

Gene Sequence

<dnaseqindica>1..333#400..672#1073..1198#1326..1382#1644..1733#atggccgtcgcgaggctggtggtcatcacccccgccgtcctcctcggccgcaccgcccgcgtctcgccgtcggcggtgccgcggctgcggcccatcgtcgccggccgccgcgccgtggcggcgcccacacgcgccgtcctgggagacggggcgggtgtcggcggcgaggaggatgcggtggtggcggtggtggaggaggacgcggtcgcccggcgcgcggcgaggaagcggtcggagcggcgcacgtacctggtggcggcggtgatgtccagcctcgggttcacgtccatggccgccgccgccgtctactaccgcttcgcctggcaaatggaggttcgtactctcggcctagctcgccgccgtcatctaaggtgacacgcgcattgtttcttggtgcaggccggcggcggcgacgttccggcgacggagatggtcggcacgttcgcgttgtcggtgggggcggcggtggggatggagttctgggcgcggtgggcgcaccgggcgctgtggcacgcgtcgctgtggcacatgcacgagtcgcaccaccgcccgcgcgacggcccgttcgagctcaacgacgtcttcgccatcgccaacgccgccccggccatctccctcctcgcctacggcctcctcaaccgcggcctcctccccggcctctgcttcggcgcggtaaataactctcctcctcacagtaacatactacttcctccgtagttttataatgtttatactcaacattcgaatgtttatcttatttgaaaatttcttataattaataataataatattattagctgataaaatatgaaaatcattttatatgcgattaattttttataaaaaaatagatagttaaaagttagacacagatactccttattatacttatttgaagagggaggtagcagttacattacttaactggaaagtaccaggagttaaaaagaaaaaaaaaagccttctctggctgtcacgtcgtggtcgggggcgtatccgttttgaggctcttctttatcgtctgatgggtgacgtgtcacgtggttggcgctgacgtggccgcgcgcaacaggggcttgggattacgctgttcgggatggcgtacatgttcgtccacgacggcctggtccaccggcgcttccccgtggggcccatcgagaacgtgccctacttccgccgagttgctgccgcccaccaggtaaaaatactcccagccacacgtacaacgacgcctcgtcagctgccacttgggcaggtgacatgtcgtcgctccgagaacctgttgtttgatgatgcctactatgtctggtttctttcttgtgtagatacatcacacggacaagttcgaaggcgtgccctacggcctgttcctcggacccaaggttagtgattctctttgcattgtgtttggaagttgtttctgtagcagtagtagcagctacaacagtttaaaattgctatagcttgcaaccacttcgaactgtcgtagccgcagcagttgtggcagctatggctgtggaatagaggcatctttaaaatgcagtgaattgtaaaatgggtttgatttttcgattgctcacggcgcaaatttgttagcgaatttgattgtttgtgctgaaattcgtgatgattttggattttaggagttggaggaggtgggtgggactgaggagctggacaaggagatcaagaagaggatcaagaggaaggaggccatggacgccatcagatga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0533500, RefSeq:Os10g0533500