Os10g0534400

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Revision as of 08:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0534400| Description = Similar to E4 protein (Fragment)| Version = NM_001071695.1 GI:115483133 GeneID:4349229| Length = 1249 bp| Definitio...")
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Gene Name

Os10g0534400

Description

Similar to E4 protein (Fragment)

Version

NM_001071695.1 GI:115483133 GeneID:4349229

Length

1249 bp

Definition

Oryza sativa Japonica Group Os10g0534400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21241875..21243123

Sequence Coding Region

21242127..21242141,21242246..21243037

Expression

GEO Profiles:Os10g0534400

Genome Context

<gbrowseImage1> name=NC_008403:21241875..21243123 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21241875..21243123 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcctcgccgtcacgcagcgacagcttctcacacggttggctcaggcggaaggcgcggccggcggcggcggcggcgtccttcgagcgcctcgtcggcggcgagggcgatgccgtggatgtcgacggcgatctcgggcattcgttcaacggctctgtcgtgtcgttcatcgacatggaccccgcggagctcttctcgatgcggtggacgtcgttgacagcggcggcggaggaggaggaggaccacgacgacgacgacttcgacttcggcatgccgtgcgtcgccggcgcgcagtgctcctccccgctgctggtcggcgccgggcgcgccctctccgacggccaccaccaccacctcctcctcccgtgcgagccgggcgtcgttgtggcccgtgaccgcacggcgtcgtacgccgacgcgccgtcgccgagcccgtcgtcgccgctgttccactcggcgctgagcacgccggcgtccgtgatcaccaccgccagctcgcgccgcgccggcgccggcagcggcaaggcgagggcgccgctgctggcgacgaggagaatccttctcaggtacctgcggttcctcgtgccgctgtgccggaaggtgaggtcgctcccgctgcgcgtgctctcgccgcggtcggccaagggtagcctcgccgccgcttcgtcgtcggcgtccccggcgcggcggtccacgtcgagcagctacgccagcgcggcggagtactggtgccacggcaatgccgacaccgccgtgcgcgacgccatcctctactgcaagaaatccatcggacaggatatgtaa</cdnaseq>

Protein Sequence

<aaseq>MEASPSRSDSFSHGWLRRKARPAAAAASFERLVGGEGDAVDVDG DLGHSFNGSVVSFIDMDPAELFSMRWTSLTAAAEEEEDHDDDDFDFGMPCVAGAQCSS PLLVGAGRALSDGHHHHLLLPCEPGVVVARDRTASYADAPSPSPSSPLFHSALSTPAS VITTASSRRAGAGSGKARAPLLATRRILLRYLRFLVPLCRKVRSLPLRVLSPRSAKGS LAAASSSASPARRSTSSSYASAAEYWCHGNADTAVRDAILYCKKSIGQDM</aaseq>

Gene Sequence

<dnaseqindica>983..997#87..878#acttgcagcgttcgccaacaacgtgcactgaccaagccaccatcgccaccaccaccaaggcactcgccgcgctcgccacgctcgccatggaggcctcgccgtcacgcagcgacagcttctcacacggttggctcaggcggaaggcgcggccggcggcggcggcggcgtccttcgagcgcctcgtcggcggcgagggcgatgccgtggatgtcgacggcgatctcgggcattcgttcaacggctctgtcgtgtcgttcatcgacatggaccccgcggagctcttctcgatgcggtggacgtcgttgacagcggcggcggaggaggaggaggaccacgacgacgacgacttcgacttcggcatgccgtgcgtcgccggcgcgcagtgctcctccccgctgctggtcggcgccgggcgcgccctctccgacggccaccaccaccacctcctcctcccgtgcgagccgggcgtcgttgtggcccgtgaccgcacggcgtcgtacgccgacgcgccgtcgccgagcccgtcgtcgccgctgttccactcggcgctgagcacgccggcgtccgtgatcaccaccgccagctcgcgccgcgccggcgccggcagcggcaaggcgagggcgccgctgctggcgacgaggagaatccttctcaggtacctgcggttcctcgtgccgctgtgccggaaggtgaggtcgctcccgctgcgcgtgctctcgccgcggtcggccaagggtagcctcgccgccgcttcgtcgtcggcgtccccggcgcggcggtccacgtcgagcagctacgccagcgcggcggagtactggtgccacggcaatgccgacaccgccgtgcgcgacgccatcctctactgcaagaaatccatcgtaagttcacgacttcacgtatgcaatttcaatccagtcaagcatacgacattcatgtttcaccagcaagtttggactgatcgtttcgttcttgcacgtttcagggacaggatatgtaactgctaatcacgatctctcgcaagaacagttcatgtgaatgttggatgattaatcagagagaaagatgaatactttgtcacctcgattcctgatcttttgggggattttgacatgtggtgtatatgcatacagtaatattacggtgtataagttgatgaattgtgctccaaggggtttaaccttgtgaagctgtttaattagctaatcaatatgttgttttagcataaattaattaactactgtgttagaag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0534400, RefSeq:Os10g0534400