Os10g0534700

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Revision as of 08:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0534700| Description = Protein of unknown function DUF604 family protein| Version = NM_001071698.1 GI:115483139 GeneID:4349232| Length = 24...")
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Gene Name

Os10g0534700

Description

Protein of unknown function DUF604 family protein

Version

NM_001071698.1 GI:115483139 GeneID:4349232

Length

2438 bp

Definition

Oryza sativa Japonica Group Os10g0534700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21251607..21254044

Sequence Coding Region

21252078..21252191,21252411..21253880

Expression

GEO Profiles:Os10g0534700

Genome Context

<gbrowseImage1> name=NC_008403:21251607..21254044 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21251607..21254044 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgggaggaggaggaggagccggagagaagccgccggcgtccaatggcgtgcacggttccggcaaggccaggttcacccttctctacggcctcctcctctacgtcgtcatgccggtgctcttcctgtacatgctcgtcgccgccgccaccccgttctacaacccccgctgctcgccggagtccaacgccgccatggcacgcttcgtcgtggccatgcccaacgcctcgtcggtgaacggctcttcaccgtcgtcttcgtccccgcctccgacgccggtgaggccgatgcggtccgcggacgaggcgccgacggggctgcggcacatcgcgttcggcatcggcgcgtcgtcggcgctgtggaagagccggaaggagtacatcaagctgtggtggcggccggggcggatgcgcgggttcgtgtggatggacaggccggtggaggagttctactccaagagctcccgcacggggctcccgccgatcatggtcagctccgacacgtccaagttcccctacacccacggcgccgggagccggtcggcgctgcggatctcccgcatcgtctccgagacgttccggctcggcctccccggcgtccggtggttcgtcatgggcgacgacgacacggtgttcctcccggagaacctggtgcacgtgctctcgcagtacgaccaccggcagccgtactacatcgggtcgccgtcggagagccacatccagaacctcatcttctcctacggcatggcgttcggcggcgggggcttcgccatcagccgcgcgctcgccgaggagctcgccaagatgcaggacggttgcctccaccgctacccggcgctgtacggcagcgacgaccgcatccacgcgtgcatgtcggagctcggcgtgccgctcacgcgccacccgggtttccaccagtgcgacctgtggggcgacgtgctcggcctcctcggcgcccacccggtggcgccgctggtgacgctccaccacctcgacttcctcgagccggtgttcccgacgaccccgtcgcgcgccggcgcgctgcgcaagctgttcgacgggccggtgcggctggactcggcggcggtggcgcagcagtcggtgtgctacgaccgggagcaccactggacggtgtcggtgtcgtgggggttcgccgtgatggtggtgcgcggcgtgctgtcgccgcgggagatggagacgccgatgcgctccttcctcaactggtacaagcgcgccgactacacggcctactcgttcaacacgcggcccgtggcgaggcagccgtgccagaagcctcgcgtctactacatgcgcgactcccggatggaccgccgccgcaacgtcaccgtcacggagtacgaccgccaccgcggcaagcagcccgactgccggtggcgcatccccgaccccgccgccctcgtcgaccacatcgtcgtcctcaagaaacccgaccccgacctctggaaaaggtcgccgaggaggaattgctgccaggtggtgtcgtcgccgacgaaggcagggaaaaaccggacgatgaccatcgaggtcggcgtgtgcagggaaggcgagttcgccaagctttaa</cdnaseq>

Protein Sequence

<aaseq>MVGGGGGAGEKPPASNGVHGSGKARFTLLYGLLLYVVMPVLFLY MLVAAATPFYNPRCSPESNAAMARFVVAMPNASSVNGSSPSSSSPPPTPVRPMRSADE APTGLRHIAFGIGASSALWKSRKEYIKLWWRPGRMRGFVWMDRPVEEFYSKSSRTGLP PIMVSSDTSKFPYTHGAGSRSALRISRIVSETFRLGLPGVRWFVMGDDDTVFLPENLV HVLSQYDHRQPYYIGSPSESHIQNLIFSYGMAFGGGGFAISRALAEELAKMQDGCLHR YPALYGSDDRIHACMSELGVPLTRHPGFHQCDLWGDVLGLLGAHPVAPLVTLHHLDFL EPVFPTTPSRAGALRKLFDGPVRLDSAAVAQQSVCYDREHHWTVSVSWGFAVMVVRGV LSPREMETPMRSFLNWYKRADYTAYSFNTRPVARQPCQKPRVYYMRDSRMDRRRNVTV TEYDRHRGKQPDCRWRIPDPAALVDHIVVLKKPDPDLWKRSPRRNCCQVVSSPTKAGK NRTMTIEVGVCREGEFAKL</aaseq>

Gene Sequence

<dnaseqindica>1854..1967#165..1634#attgaccaggccatggaggcatgcagagagagaagctctctctcactcactcgctcgccacacaccatcacccatgcgcgctaattaacctcttttagcaactggatctcgatcgccgatcaagcctggccattgcgcgcggctacgacgacgaggaggtcgccatggtgggaggaggaggaggagccggagagaagccgccggcgtccaatggcgtgcacggttccggcaaggccaggttcacccttctctacggcctcctcctctacgtcgtcatgccggtgctcttcctgtacatgctcgtcgccgccgccaccccgttctacaacccccgctgctcgccggagtccaacgccgccatggcacgcttcgtcgtggccatgcccaacgcctcgtcggtgaacggctcttcaccgtcgtcttcgtccccgcctccgacgccggtgaggccgatgcggtccgcggacgaggcgccgacggggctgcggcacatcgcgttcggcatcggcgcgtcgtcggcgctgtggaagagccggaaggagtacatcaagctgtggtggcggccggggcggatgcgcgggttcgtgtggatggacaggccggtggaggagttctactccaagagctcccgcacggggctcccgccgatcatggtcagctccgacacgtccaagttcccctacacccacggcgccgggagccggtcggcgctgcggatctcccgcatcgtctccgagacgttccggctcggcctccccggcgtccggtggttcgtcatgggcgacgacgacacggtgttcctcccggagaacctggtgcacgtgctctcgcagtacgaccaccggcagccgtactacatcgggtcgccgtcggagagccacatccagaacctcatcttctcctacggcatggcgttcggcggcgggggcttcgccatcagccgcgcgctcgccgaggagctcgccaagatgcaggacggttgcctccaccgctacccggcgctgtacggcagcgacgaccgcatccacgcgtgcatgtcggagctcggcgtgccgctcacgcgccacccgggtttccaccagtgcgacctgtggggcgacgtgctcggcctcctcggcgcccacccggtggcgccgctggtgacgctccaccacctcgacttcctcgagccggtgttcccgacgaccccgtcgcgcgccggcgcgctgcgcaagctgttcgacgggccggtgcggctggactcggcggcggtggcgcagcagtcggtgtgctacgaccgggagcaccactggacggtgtcggtgtcgtgggggttcgccgtgatggtggtgcgcggcgtgctgtcgccgcgggagatggagacgccgatgcgctccttcctcaactggtacaagcgcgccgactacacggcctactcgttcaacacgcggcccgtggcgaggcagccgtgccagaagcctcgcgtctactacatgcgcgactcccggatggaccgccgccgcaacgtcaccgtcacggagtacgaccgccaccgcggcaagcagcccgactgccggtggcgcatccccgaccccgccgccctcgtcgaccacatcgtcgtcctcaagaaacccgaccccgacctctggaaaagggtaattctctacacgtctctctttttcatcacacagtgacacaaagtaaaacttttggtttggtctcgttatgttttcttcttgaaatgaaacacattcttctatatataaaacgtcggtaacgctctcaccgttcggagaaaaaatgacataaagtttcttttttttcactttgtaagcaatgtaaatagtgacgtgttgcgggtgaaatttgtgtagtcgccgaggaggaattgctgccaggtggtgtcgtcgccgacgaaggcagggaaaaaccggacgatgaccatcgaggtcggcgtgtgcagggaaggcgagttcgccaagctttaattaggtctgtgtgctcagcttagcctaactgatctcttcttaatttccagtcatgcatgcacgatgtcaccgtaactattggatattaatcttgtgctgcagtagcgggattaattaggagaggagaagagggattagcggcggcagaagaggtcccgggcaaaagagaggatggagattaacgaccagaagttaatccactgggaccgagtaatagctcattagcattagatcgccacacggcgatgtgttgtttaattagcgcggcgggtgtaagcatgcacgccgggactattttgatctcttcactagttcacttacatattgaaccaactcacccacgaaccggggctttttttttgccttttcctctgctgagcagagcaggagaggaaacagccggagtttcacaaatcttgtgtggtgtcagaacgattcaacaatggcaatacaaaacactcatagttcttt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0534700, RefSeq:Os10g0534700