Os10g0540300

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Revision as of 08:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0540300| Description = Conserved hypothetical protein| Version = NM_001071721.1 GI:115483185 GeneID:4349255| Length = 8045 bp| Definition ...")
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Gene Name

Os10g0540300

Description

Conserved hypothetical protein

Version

NM_001071721.1 GI:115483185 GeneID:4349255

Length

8045 bp

Definition

Oryza sativa Japonica Group Os10g0540300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21522011..21530055

Sequence Coding Region

21524377..21524492,21527099..21527155,21528586..21528651,21529150..21529381,21529488..21529692
,21529790..21529896

Expression

GEO Profiles:Os10g0540300

Genome Context

<gbrowseImage1> name=NC_008403:21522011..21530055 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21522011..21530055 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggacgatgccggtgccggtcgcactcgcagtcgcagggatccttccgatcgccctacgcgttcaggccaatttctaatcagggctttgctacgaggcgaattggaggagcgcactgcagacgcaaggtttatcccacttacaccaataatggaggatctatttgtcagcggcattgaagagattcccgaagacacttctgtgcatcaccagcaaactgatgagccaccaccatcctacaacaccattaggaggggtgaaggcacattaatggctgaactgcgtgaggctacggagcaactacgtttgtctttctatgccaacacagatgaagaaactcgggcacaaatgaaacagttttgggatgaagaattcaatgcaatatctgaagaagcaactattgagagaggtttagagtggatgcgggcggaggttgttgaggcattcagtacacacagtggggctaatgtggttgaatatgagcttgaagatatttctcaccagtgtttgatttttgatgattgtgccaagtcttatcatcattacaatttcataatgaagtcgaagtgtcctgattctcatttggagggttcttgtctcttttttgctgaagttaaagttgtggatggagagaaacactatttttgctgtcccctacaacctgatgacgacggtcattgtcacggatgccaaaactctggaattgatcttaagcatccttcagacggtggctacgaggagggcaacgctgactctggattcccttttgatccaatttaa</cdnaseq>

Protein Sequence

<aaseq>MADDAGAGRTRSRRDPSDRPTRSGQFLIRALLRGELEERTADAR FIPLTPIMEDLFVSGIEEIPEDTSVHHQQTDEPPPSYNTIRRGEGTLMAELREATEQL RLSFYANTDEETRAQMKQFWDEEFNAISEEATIERGLEWMRAEVVEAFSTHSGANVVE YELEDISHQCLIFDDCAKSYHHYNFIMKSKCPDSHLEGSCLFFAEVKVVDGEKHYFCC PLQPDDDGHCHGCQNSGIDLKHPSDGGYEEGNADSGFPFDPI</aaseq>

Gene Sequence

<dnaseqindica>2367..2482#5089..5145#6576..6641#7140..7371#7478..7682#7780..7886#actatgagaacaacctgctttctgaaagcaaataattagcttgctagaaaagtaagtgttcgtaaatcatctaccttacttcatattgtgaggtagttacgcaaattcaaagtgcaatttatcgaagtgtatagaattaggtatagcagtggaagtgtgtaatcaagaggattttcttaatactgtttaagctgacttaaagatcatttttacaatacaaagcaaatattaaatagattatgtgaaagctatgaagttgtggtgtaacatatggaaaacagaaacaaaatagttttggtaatggtacagggtagcatcatctgaatgtcaagcaaagcaagcaacatatagcttagttgtaaaaagagtggattcccatcagtttaagtgtaatattgcttatacacaggtagtttcaaggtttgctaaaacctagctagttgaacatagaaaaaaggtaactgatattttccaacactcacaaattcagcataccaccaacttccagattagctcaaaacctgtagaagtaatatgagagaatcaatgttccaatttttttacttgcttcattcattgttgccgtcaacctctgatatccttaaaacagttggatcactgttggattggtgaaagccagaaataaaggctccccgaggacacccaacatttgctctagttcgagcttagtgttttctatattttggatttcctgaggtgttaatggaacaaaaacaaaataccagaagattcaaagcttatcttcatcatatattttattatgggtaaagcaaatctgtcttctactaaaactgcacatagtattatcagcatgtaagttatttgaaggagagtaagtaaaagaactgaaaaggatcggattaagttaaggtttcaaattttatgtaaattagaatggttctaaatatagtgaaggaagaatggaatacagagaaggatgcatatggccatatgggttgtgttttactgtcttaccatttaattactcattggcaacttctcttatgcctactcttacactactatatcaagtggatattgggataaaattacaatccacttatcattacccaagttcagcaagtagccacagccagaacattaattcttcttagctggggatgaaatacttgtctcccttgatgccacagacaacagcttccagaagaatcaacctaatcccccagtttttttttttcacatgcatgttcttgtcagctagggtgttagttttaatattgtcgaggaggccagtttaagatggatgaagtagaactgcccaataaaggaatatattttctgttgctgcttacgggagaagacaatcaatccatatgaacaggagtaaaaattccagtgccaattgaaagttttcatttaggaagcaactagtatttttgcagcacaactattattcagaatatcattcaagagtaccccattcggttgtagagaatgagctgccatgtactcctagtgtctaaccttggaagttggggtagtagtatcaacgatttgtgcagtcagtacagtagaagtcaaagagccaacatgttaaattaaagatgagtagaaaacaaaaacaaaaaaacaaaatcctcatctaataatcttaacagatgctcccacaatcccacaatatcaccatctaagcattgaggcaaaacaataatcattatttcaaccaggagcaatttgatcagatcatgcaccgacgctgaacgtttcgatccccgcgggaattctcgctccctcggtctcggaggcgcaagtgcgggagcgggaaggtggacggcgacgagaagaggaggaggagagagcgaaggcaacgccgtcgatggcgacgaggggggagaggtggacgggtgtctcgtcttctcacggtggtggggatgaggaggggatgctaatatgctattttgcggcggggatggggaggaggcggcgccggcgctcgcgggagagtaggcggaagcggcgggatggtgcgcggctaagttgaggagccggatatgggggcgctgatggataggaggaggcggaggcggcgaggggattcgaagcggcggcggggtgtatttcgaaatattatttttttaaggtttaatttgtaaatatgtattttaagaaggttcccgttatctctccctttccccctttttttcgctgtctagggtttgcggcggcggcgcccgctcacctcctcgccggccggacggcgcgaggaggaatctctccacccccacactcctcgcgccggtgcccctccctccccctccatcctcctcgcgtttcgcttcccctcttcgcactactccgactcccagccggaagcgccggtgtcgatggcggacgatgccggtgccggtcgcactcgcagtcgcagggatccttccgatcgccctacgcgttcaggccaatttctaatcagggctttgctacgaggcgaattggaggagcggtaattttccattctttatttttcttttaaatctcctccatgctctgtcgttgttttttcccttacaatgttgttgtgtaggagtagtttttttttaattggattcataacattataaatttgcatgttttaaaaaataataacattataataattcatataatcgaaacaatgccactaaaactcctatgaaagccaaatgggagcggttgggtaactccgaggcgctcaacggatcttgccgtcgtgccatccaggccccaacaggtgccctcaggctgagatattgaactatatgctacttttagatgtggcaattctagggggagttcctgtgcccagcacctcaaaaatcatattttttagctattccattccttcaacaccccttctggtcctttccagtttccatccctctcatcgcattcctcctgtgtttctagggatctctgtctcagacctttctccaaaaatcaacggtattgtcattcaaaaccctcccaaccgcgtctggtatcctatatcgctctgggcatcttccgcacctaggttgcaagttagaatgtggcaaactatatgattttggtgggggcagatagtttgcatggagcagtgtttcagttccatagttcgttaattcaggcagcttggccagagcagcattcgacaacatcttctcaactctgtcaggaattacaatggatatcgcttagcaaaaggcctctacgcttgccctaaatgtgccaccaacaacccgctctccgccccccccccccaaaaaaaattttttttttcatggagctccctcattaggaacaagaaattatcgcgaggctttactctcctcaccaaccgtccctcctcaagcccatgctcctcctcggagaaaaccgatgcttctgctctgctgctgcctcgctactgaccacaaggttaaacactgtagagatccagttgtgtgcaccgcctgtcgttgccctggccaccggcaggacaactgcccctcctttgttgcttcaaactttcctttcgggggatctgcagttgttgcttccacgacctcttcctccgccaacctcttgcctctgactccctcgcctctgcgccttcgccaccaccctcgccaccaccgcaacctcgctacccctcttccacccgcttctcggctaagtgggtccgcaaagccaaacaagcacaacagcagtgacggatcccctctgctcccttcccaaaatccatccaatctactgccatgcaaccctccttggctccgtctctctccctaaattccttgctagcctttgcttttgaaaccctaacagatgaggagcttctcaagtttcttgcggtagaagttctggaggtcgctatccgctccaatgtggaccaccatgccgttaacagggaggcaagaaagggaaaggctattgttcatgcatgtgcgcctcctggtggcccctcatccccttcctgggatgtgtttatttcccaaggtacctcgactgctctgtgatcctcatcccttgacattcctctgatctccttttcccctccacaccctgctgctgctgctggaggtattgttcatgctggatctagaggtagcggatctggatctttgaaagaattagaatctggagattctgtttcggatgactccaatgcccccactcatcctagaggaccgggtactccggaaccggtctcgagctaagcggatgccttggggattactaactttgtggatgttttttccccgtactcggatatgagacttggtagtcactatgcttatgctttcatggtcccctcttctcatcccccggctggaaacatttgcagcgcgatgagggaatacctacctgacatgcatttctcccttcatgccttttgtcatggtgctatgatggttcatttcaatttgttgcaagacagagaggttactgctccacgcccaacttcacgtcccccacacatcccatccttaggccttagctatgccgggctgccagcaagggcgtcaacggagcaagcggcagtggacgacgggtccagcgttggcgacacagcatggagggaggagggcgatggacgtgccgttgggtggccagctctatgggcccatcctgctggagttcgggatgcttccggcacgttcctcgctcgattggagttcatctctgcagcgggtggagctcgccgctacagtgggtggctggctttgaccttgggtgttggtcatcgccggcaagctgtcgatcctccacaccggctttatttttctcttttttttcttttcttttgtttttcttttctttccctccgtgtaaattccttttccaggggtgctttcgttcgtatgaaaaaatagtaaacaaaaacacttgataacatggaacaaacgtatggcatggcatggaaccacttttgagagtattgcagtagcatcgatctaattatatgaattataatgttattttttgaaacggtaaaatttataatgacatgaatccaattaacccttttttgttacagttttgcttttgtttcaagctgtagcaactgacacattttctctttcctcgcattctgttgatgaatcacagcactgcagacgcaaggtttatcccacttacaccaataatggaggatctatttgtcaggtatgcttattatcatgtctttcctatatttttcttggctagcttaatgctcgtgtgttgcaacagattctaaaaaacattcattgacataaattaaaatcataaacaatatattacaattgggcataaataatgaaggaaatataaatatagaaataataacatgaaactacaaataactttggccggaataataattcaatatcagaaaaattatataactaaatccccattttttttttcatttagctataaataattcaatacagaggaaaattataagttacaataatttttagtggatcaaatagtgttaaaactaatagagtaaatttcagaaaactgcaactttagtgacaaaactatcagtttgctgcaacattagcgacatgtttcagtttgctgcaacaatagcatatgaaattatcacaaaactgcaacttttacgttatatgtactgtagcatcatataacgtaaagttgcagttttgtgataatttccaacgctattattgcagcaaactgaaacatatctctaatgttgcagcaaaccgatagttttgtcactaaagttgcagttttctgaaattttactctaaaattgtaaataaaaaacaactgaaattagctataaactgaaaaaacctattttagctgatagatgaaaatatgatccatcaattctgaacgggtgttcgtttcattgagataaattaaaattttcttgttctattcatattcctattgtctctattatatgagtgatctaggagcatggtatggctagactaggaaggaatagcattgttcatcgtcttccttagccgaaggcaagtaacaaaataggagggaagatgggtatcggtgctcgggtgaccaaacggcgatgaggaaacgatgtgactcgtatatagatggtaaaggctgggaacaagaaaaccagaacagtaggaaacacatctggcaacgacatggtcccgatagagagagaaatggcaacagcaagcttgtggtgaacacggtagggtgagtgcgtcaaaacgtgttctcggtcgagggggtctgttttccttgaacgtgtaggagggagggagcgcaggggagaagaggggcgctaggaggaggggtgatggggaagaggggcgcctagggaggagagggggcacggggggagggggagcatgtgcagcgagagagagatggggacgccgggaggaaggcggaagcggagacacacgggagggagggagggatagacgaaagagatagggggtagagagggaggcggaagcgaagacacgcgggagggatggacgaaaatcgatctgcaacatatttaattagggatgaactaaataattacttgtgttcaaattttgcttgtccttattattttcaatcactttatctaatggtgttacgcttgtcagcggcattgaagagattcccgaagacacttctgtgcatcaccagcaaactgatgagccaccaccatcgtaagcctcgtgcaagatctcttaatcaatttcataactatttatctatttgtattattagactgattatggtgctatgaaatataaatgtcgtatgatttgccttctggtaggtatgtgtagttgtttttatctcttgtgaatgtgtgaaaacttgccttgtatatgactagcattttctaccttcttctttaaccttaatcttgatgaacaacaaaagagtggtgatttcatcaatatctgagttgctaaaatactgtttgttatgttacatgcttgtatatttgcatgagctctaaattttacgaatattacttcttaaatattgcttgcttatatacaagcatatatacatgttctagttctaaattttatatgtaaaatttattcatttaatgcctatatacctgcacagtgctaaaaaatcatttatgtatggtctaaactttacaaatgatactgtattgattgttataatatgtaataccattgccacagctacaacaccattaggaggggtgaaggcacattaatggctgaactgcgtgaggctacggagcaactacgtttgtctttctatgccaacacagatgaagaaactcgggcacaaatgaaacagttttgggatgaagaattcaatgcaatatctgaagaagcaactattgagagaggtttagagtggatgcgggcggaggttgttgaggcattcagtacacacagtggggctaatgtatgtatttgtttatattatatatagaaatcactgcttccatttttatattatatatagaaatcactgcttccattgttcaattttaatttagaatgttttccaggtggttgaatatgagcttgaagatatttctcaccagtgtttgatttttgatgattgtgccaagtcttatcatcattacaatttcataatgaagtcgaagtgtcctgattctcatttggagggttcttgtctcttttttgctgaagttaaagttgtggatggagagaaacactatttttgctgtcccctacaacctgatgacgacggtatttacattacttatatttattgtttatctcatatttttgtcacttaaattttatatatttggaatcattagcaaattaattaaattctgattaggtcattgtcacggatgccaaaactctggaattgatcttaagcatccttcagacggtggctacgaggagggcaacgctgactctggattcccttttgatccaatttaatttgatggatgaaaattcagaaatatgtactaaattgagcagcgcctgaattgagttgtgtaatgaatgctcctacataaaccttgtgttcatgttcaaactggctattggtattgtgttttattcggtagcattagcaatctattagcaatatgttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0540300, RefSeq:Os10g0540300