Os10g0544500

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Revision as of 08:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0544500| Description = WD40-like domain containing protein| Version = NM_001071736.1 GI:115483215 GeneID:4349273| Length = 2868 bp| Defini...")
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Gene Name

Os10g0544500

Description

WD40-like domain containing protein

Version

NM_001071736.1 GI:115483215 GeneID:4349273

Length

2868 bp

Definition

Oryza sativa Japonica Group Os10g0544500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21708865..21711732

Sequence Coding Region

21708945..21709061,21709637..21709888,21709976..21710119,21710229..21710948,21711410..21711676

Expression

GEO Profiles:Os10g0544500

Genome Context

<gbrowseImage1> name=NC_008403:21708865..21711732 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21708865..21711732 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgccgcccgtggaagcacccgacgaaggccaggcacggcgccgctgacctctgcctccgcgaggtcggcctcctcctcccccgccgcttcgcccgccgcgcggccgcctccgaggatcttgtaatgcgcctgcaggttcacaggaagctcaacaggcatacaggctgcgtgaacacggtaggcttcaacgcggatggcgataccctcatatcggggtccgatgaccagatggtgatgctgtgggactgggacactggtgcaatcaaattacagtttccttcaggccatagcaacaatgtgttccaagcccgtttcatgccatacacgaacgatcaaaccattgtcacttgtgctgctgatggagaggtgagacttgccaagataggggatggtggagatgtacctactacattgctaggcgatcatgatggaagggctcacaagttggccattgagcctggcagtccttatattttctatagctgcggcgaagatgggcttgttcaacattttgatttgaggacaaatacagccacaaaattatttcagtgcagaaactctttgagtaaatcaggacactcttccaatattcatcttaatgcaatcacaatagatccgaggaatccaaatcttcttgcagttggaggaagcaattgttatgctcgtgtctatgacatccgcaaatacaaatgggatggatcttctgattacccatctgactgctactgtccaccacatcttattggcaatagatttgttggaataacaggcttagcattctctcaccagagtgagttgcttatatcttacaacaatgagaatatttatctcttccctaaaaatggaggactgggaccagacccaaagtcatctgtcaagattgaagccaacaaagggtccaaatcaacaatagtttcatctggagaagatgttgatcgacctgcaccactgatgtatgctggacatcgcaattgtgagactgtcaagggagtgacattcattgggccaaatcatgaatatgtcgccagtgggtcagactgtgggcgattatttatttggagaaagaaagatgggaagtttttgcgggcaatggagggtgatgaatgtgttgtaaactgtattgagccccatccgcacactatgacaattgcaagcagcggaatcgataatgacgtaaagatatggactccctctgccactgagcgagcaccagtggtaaacattgaggagttgaagcctcgtaaaagaagaacaaaactctggcacttttctctaccagaggaattgatctttcatgttctggcatcacgacgcagacagcaagcagctggagatgatgattcatctgaggatcttgaggacagcacaggattgcttaatcttgtactccgagctgcggagagagacgtgctatctgatgaggatgaagaatcctccgaggactctggagattgtagtctcaacttatctatggctcaaccctggaaacattgctaa</cdnaseq>

Protein Sequence

<aaseq>MRRPWKHPTKARHGAADLCLREVGLLLPRRFARRAAASEDLVMR LQVHRKLNRHTGCVNTVGFNADGDTLISGSDDQMVMLWDWDTGAIKLQFPSGHSNNVF QARFMPYTNDQTIVTCAADGEVRLAKIGDGGDVPTTLLGDHDGRAHKLAIEPGSPYIF YSCGEDGLVQHFDLRTNTATKLFQCRNSLSKSGHSSNIHLNAITIDPRNPNLLAVGGS NCYARVYDIRKYKWDGSSDYPSDCYCPPHLIGNRFVGITGLAFSHQSELLISYNNENI YLFPKNGGLGPDPKSSVKIEANKGSKSTIVSSGEDVDRPAPLMYAGHRNCETVKGVTF IGPNHEYVASGSDCGRLFIWRKKDGKFLRAMEGDECVVNCIEPHPHTMTIASSGIDND VKIWTPSATERAPVVNIEELKPRKRRTKLWHFSLPEELIFHVLASRRRQQAAGDDDSS EDLEDSTGLLNLVLRAAERDVLSDEDEESSEDSGDCSLNLSMAQPWKHC</aaseq>

Gene Sequence

<dnaseqindica>81..197#773..1024#1112..1255#1365..2084#2546..2812#actccctcctcctcccccaccactgcctccggcgatttcctcctcctccccgttctcgaagcttcttcgccctcgccgccatgcgccgcccgtggaagcacccgacgaaggccaggcacggcgccgctgacctctgcctccgcgaggtcggcctcctcctcccccgccgcttcgcccgccgcgcggccgcctccgaggtgcgtgcccctcccccctcgatctctctctctctctctccccctacctcacgacgattggatcggatcggtagcgagggctaaaggatcggggcgatcgggatggggtttgcgcgctcgccggttgctggatcgaggcgtgatgaatcgtgtgctttttgtgttgttgcgtgtttgatgatgatgcttgggcgggtgttgggttagctaggaatagtgttggggtagggcggatgcggatgcggagcgagcaccggtgatggtgggcgatgcgattcggtatcgggggattcggttcgttctatactggttgggttgatgccgattactcgctagattggtctcgcgagcaagcatggttgatgtcgattactcgttagattggtctcgagagtatttggttgcagatggtgggaatgaatctcttagcacagggcgtttagccatctagaactttcgattggcaacttaatgggtctggactgaacagcttgatctgaactacctgttaccatgatcgttaactaatgggcagaattaaagaataatgctaatgtaattgttggcatgtacaggatcttgtaatgcgcctgcaggttcacaggaagctcaacaggcatacaggctgcgtgaacacggtaggcttcaacgcggatggcgataccctcatatcggggtccgatgaccagatggtgatgctgtgggactgggacactggtgcaatcaaattacagtttccttcaggccatagcaacaatgtgttccaagcccgtttcatgccatacacgaacgatcaaaccattgtcacttgtgctgctgatggagaggttaatggacgtattgtgttgttttgatcttttgatataaattacattttagatatttcagatgtaatcatgtgttactgcaaacaggtgagacttgccaagataggggatggtggagatgtacctactacattgctaggcgatcatgatggaagggctcacaagttggccattgagcctggcagtccttatattttctatagctgcggcgaagatgggcttgttcaacatgtagggaaccacggaccccctccctccttcacaaatgctcattttcagctatgtataaaatgcaaatgaatttcttactgtataactagccacttcccttcttgtgcagtttgatttgaggacaaatacagccacaaaattatttcagtgcagaaactctttgagtaaatcaggacactcttccaatattcatcttaatgcaatcacaatagatccgaggaatccaaatcttcttgcagttggaggaagcaattgttatgctcgtgtctatgacatccgcaaatacaaatgggatggatcttctgattacccatctgactgctactgtccaccacatcttattggcaatagatttgttggaataacaggcttagcattctctcaccagagtgagttgcttatatcttacaacaatgagaatatttatctcttccctaaaaatggaggactgggaccagacccaaagtcatctgtcaagattgaagccaacaaagggtccaaatcaacaatagtttcatctggagaagatgttgatcgacctgcaccactgatgtatgctggacatcgcaattgtgagactgtcaagggagtgacattcattgggccaaatcatgaatatgtcgccagtgggtcagactgtgggcgattatttatttggagaaagaaagatgggaagtttttgcgggcaatggagggtgatgaatgtgttgtaaactgtattgagccccatccgcacactatgacaattgcaagcagcggaatcgataatgacgtaaagatatggactccctctgccactgagcgagcaccagtggtaaacattgaggaggtactattggagcaccagctatctctgcttgtcatctcaacttacatcaacatattatgcatttctctatcctttatgttatattattttgataatttgccaataaacagttgtgctttccatattgtgcgctgaataggcacataatgaccagctgtttgcaaacaaaatctaactgttacattgtctataggaactaggaagcagttccacatcagtgccttcacccctcttgacaattcatctattgatcttttttaggactgttgatattgacaacaccaatgacattgaaagtgttcaatattcatatcgataaaaaagagtgaaaataccagtgttattgcactgtagtatcaaattgaacttctctatgatcatgtctttatttttttttctcaatatgctttagccttattattacgttaatgctgatgtttcacatattttctttcttccagttgaagcctcgtaaaagaagaacaaaactctggcacttttctctaccagaggaattgatctttcatgttctggcatcacgacgcagacagcaagcagctggagatgatgattcatctgaggatcttgaggacagcacaggattgcttaatcttgtactccgagctgcggagagagacgtgctatctgatgaggatgaagaatcctccgaggactctggagattgtagtctcaacttatctatggctcaaccctggaaacattgctaaattgtacatatacagtgatgttttatcctgttttcatggacgtgtgtttttcagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0544500, RefSeq:Os10g0544500