Os10g0544900

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Revision as of 08:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0544900| Description = Similar to Protein phosphatase 2C-like protein| Version = NM_001071738.1 GI:115483219 GeneID:4349275| Length = 4113 ...")
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Gene Name

Os10g0544900

Description

Similar to Protein phosphatase 2C-like protein

Version

NM_001071738.1 GI:115483219 GeneID:4349275

Length

4113 bp

Definition

Oryza sativa Japonica Group Os10g0544900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21748647..21752759

Sequence Coding Region

21749062..21749386,21749916..21750283,21751002..21751238,21752172..21752423

Expression

GEO Profiles:Os10g0544900

Genome Context

<gbrowseImage1> name=NC_008403:21748647..21752759 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21748647..21752759 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctatctgctgcgatggaatacttgagatcttgctggggcccggcgtcgtcgccggccgggcgcccccgcaaaggatcggatgcggcggggcggcaggatgggctgctgtggtacaaggacgccggccagctcgtcgccggcgagttctcgatggccgtggtccaggccaacaacctgctcgaggaccacagccaggtggaatccgggccactgagcaccacggatcccaacctgcagggcactcttgtgggcgtctatgatgggcatggaggcccggagacggcgcgctacatcaatgaccatctcttcaaccatctgaggggatttgcttctgagcacaagtgcatgtcagcggatgtgattcggaaggcgtttcgagcaactgaggagggattcttttctgtagttagtagtcaatggtcgatgaggcctcaattagcggcagtaggctcttgctgtctggttggtgtgatctgtgctggaaatctatatattgcaaaccttggcgattcccgtgctgttctcggtagacttgtgaagggaactggggaggttctggctatgcagttgtcagcagaacacaatgcatcctttgaagaggtcaggcgagagctgcaggcagcacatcctgatgatccccatattgtggttctaaagcacaatgtttggcgtgtgaagggtattatccagataacaagatccattggagatgtgtatctgaagaaaccggagttcaacagagaacctttgcatagcaaatttcggcttcaagaaactttcaggaggcctcttcttagttctgaaccagctattgttgtacaccaattacagacaactgatcagttcatcatttttgcatctgatggactatgggagcatattagtaatcaggaagcagttgatcttgtccaacataatccccgcaatgggattgctagaagactagtaaaggctgcaatgcagcaggcagcaaaaaagagggagatgaggtattcagatctgaagaaaattgatcgtggggtaaggcggcacttccatgatgatataacagttgttgtggtgttctttgattcgaatgccataaccactgctaactggagccgaccttcagtttctcttcgagggggtggtgttactctccctgcaaattcccttgctccattctcagttcctacatag</cdnaseq>

Protein Sequence

<aaseq>MLSAAMEYLRSCWGPASSPAGRPRKGSDAAGRQDGLLWYKDAGQ LVAGEFSMAVVQANNLLEDHSQVESGPLSTTDPNLQGTLVGVYDGHGGPETARYINDH LFNHLRGFASEHKCMSADVIRKAFRATEEGFFSVVSSQWSMRPQLAAVGSCCLVGVIC AGNLYIANLGDSRAVLGRLVKGTGEVLAMQLSAEHNASFEEVRRELQAAHPDDPHIVV LKHNVWRVKGIIQITRSIGDVYLKKPEFNREPLHSKFRLQETFRRPLLSSEPAIVVHQ LQTTDQFIIFASDGLWEHISNQEAVDLVQHNPRNGIARRLVKAAMQQAAKKREMRYSD LKKIDRGVRRHFHDDITVVVVFFDSNAITTANWSRPSVSLRGGGVTLPANSLAPFSVP T</aaseq>

Gene Sequence

<dnaseqindica>416..740#1270..1637#2356..2592#3526..3777#cttttggatcctggagaggagaggaggagcccaccgtttctccaccaaaaacccaatccttgctgcttcctccgagcttgagatcgattggttccttccagatctaaggccacccctttcggctgcgagatcgatcgcgcaggaatctcgaagctaatcctagaaagaaagagagaaaaaaaaggcgagttatttttcgcttctttctccttatgttccaaaatgcaagtagagtagggttgtctcgttgatccttctccctctgatgatcatatggtttgtggttcttgatcctgggatgcgtgtttgtttggatgcaattgcaggtttcgcgaagaaacgagaggaggagagggaaggtaaaggaatgggctttgtgaggaagtgggcgatggggaggtgtcggagatgaaggatgctatctgctgcgatggaatacttgagatcttgctggggcccggcgtcgtcgccggccgggcgcccccgcaaaggatcggatgcggcggggcggcaggatgggctgctgtggtacaaggacgccggccagctcgtcgccggcgagttctcgatggccgtggtccaggccaacaacctgctcgaggaccacagccaggtggaatccgggccactgagcaccacggatcccaacctgcagggcactcttgtgggcgtctatgatgggcatggaggcccggagacggcgcgctacatcaatgaccatctcttcaaccatctgaggggtgaggcctctactgactactgctgctgaaaatcttcaccctttgatccaatgccgatctcgctatgctatctgattaataggtgattggtccaattgtttatgatgtgctgcaagtgtagatgtgtttgatattgatagttgttgagcgaaaatggttttcagttgagtagatatctgttataagctgcattgcatcattgcatgagatgtggttctgcgcatattaccgcgaaaaagcgcgcgcgtatttgaatgcatctactattagaccaggggccaggattgccctaattttgacccatagatgattttctggaatgtaattaaacacatcacatgccagtttagaaactgactgcaagaatttttttatgaatataaagcatggcatcttctagttacatctgattgtataattatttgtttacaagtaactgctaataatcatttctgcctgtgcatctctatagctttaattacttgctaatcatcagttgtgcatgcccatgattaccttcctttttcaggatttgcttctgagcacaagtgcatgtcagcggatgtgattcggaaggcgtttcgagcaactgaggagggattcttttctgtagttagtagtcaatggtcgatgaggcctcaattagcggcagtaggctcttgctgtctggttggtgtgatctgtgctggaaatctatatattgcaaaccttggcgattcccgtgctgttctcggtagacttgtgaagggaactggggaggttctggctatgcagttgtcagcagaacacaatgcatcctttgaagaggtcaggcgagagctgcaggcagcacatcctgatgatccccatattgtggttctaaagcacaatgtttggcgtgtgaagggtattatccaggtacatatctggacatcttaattattttgctatttgttgtctattcattttgactcatctaattattttgtagaatcttgacgtcttgttctaataataactcgcagactttcccatgcgattggcacgggactagattatagtcagccaactgaaagcataattgtgtttgctgtgccactcttaggtttatgtccaaaattagaattgtacttctctgatacggatggagtaatgctctattatgtacgccatccatctgtactgttataatctggacctgccttcataaaataagtgtacatgtttctctttttcccaattaatctggtaatttcaaaccctttagaacatgctatgtgatggcaacttctgcagaatttagtgtcttttgtttctttgtttggtaagaggaaaatctcatttatcacagctaaataaatataagtgattcgataattatgcttcttttcaagtttcaataaccatgaatcgatctttttatctctaaaactaatgcaactgcaataacatgacactgctgttatggaccaagaccaatatgatgtaaagttcttgaattcaattgcaatctccctgaaggaacaattattctgattgcttctggtaattagtgtgtataagaggtgccgtgatattttgtttagactgctgcgttcccacagcacatcttacgtggtgtgatggtgtgttccagataacaagatccattggagatgtgtatctgaagaaaccggagttcaacagagaacctttgcatagcaaatttcggcttcaagaaactttcaggaggcctcttcttagttctgaaccagctattgttgtacaccaattacagacaactgatcagttcatcatttttgcatctgatggactatgggagcatattagtaatcaggaagcagttgatcttgtccaacataatccccgcaatgtatgtgttcttatcttatgtaaattaattatttcaatggcgaagtgcttgttcatattattgcttgtccaataaaagaaatcttgatacgtttttgtaatagttacatgctttgattgttattatcattagggtaaatagatgattggatgtcaattgtctgagaaagtagagaagatcatgttgaatatctttagaacttgctgttctaagtttcttttaaatgtaacaaatattcagaaagaacttgttaggtatatgttaatacgataccatatgaaattatgaaggcacctttacattgtgagtttagaaagcctttaggattgtagctgtttattggttgtagccctgtaggtgttttaggaattcagatttgtacgggatctgctattaggggtatgatcaatttgttaatgttgtttgagacaactgcactgtatttggtccgaattctgtaatttttccccatccaatcctatgcccctgataatctagcaggttctttctttacgctgtataatccttttcctatcactttatttgattcttaatccttgaatgaattcgattcatgaaaatacatgtgtcacttaaatagttaaattgtttgcactgaaattcttcaattgttgatatgatatggatcctattaatatatgcactatacatgaagatcaatactgatgagctgttacgttgctaatttgttcatattccttgcaacttcacacactatatctgtccacctcaagatgctcactacggatccatcttaaatggttttctaaacttattagttccagatcatgtagtgcaacccagcctcatcaaatgaaatcttgttctctatttttttgtgcttttattcatcttacagataacaattaattgcttatcttactaatgctactataacttcctgcgtatcaggggattgctagaagactagtaaaggctgcaatgcagcaggcagcaaaaaagagggagatgaggtattcagatctgaagaaaattgatcgtggggtaaggcggcacttccatgatgatataacagttgttgtggtgttctttgattcgaatgccataaccactgctaactggagccgaccttcagtttctcttcgagggggtggtgttactctccctgcaaattcccttgctccattctcagttcctacatagctaagaagctctttttaaaaacagcaccgaatttaagaatgcaagaagaccaaaaaagaaaaaaaaagaaaaaaaagaggaagaaaaggaaaaggaagagagcatcagttgtgattaactgttgcgtgatttcttctgcgttgttcttgtaaaacctttttagattcaaacttggtgactagtgtactgatagcaaggtataagattagattattcttagcttttctttttcaccccttttttcacgctcatgggatatcaggtggttgtacattctctggatcatcttgtgataatagttcatcatcccttattttgttaactccttcagaaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0544900, RefSeq:Os10g0544900