Os10g0545000

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Revision as of 08:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0545000| Description = Mg2+ transporter protein, CorA-like family protein| Version = NM_001071739.1 GI:115483221 GeneID:4349276| Length = 2...")
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Gene Name

Os10g0545000

Description

Mg2+ transporter protein, CorA-like family protein

Version

NM_001071739.1 GI:115483221 GeneID:4349276

Length

2958 bp

Definition

Oryza sativa Japonica Group Os10g0545000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21754027..21756984

Sequence Coding Region

21754201..21754485,21754983..21755267,21756018..21756479

Expression

GEO Profiles:Os10g0545000

Genome Context

<gbrowseImage1> name=NC_008403:21754027..21756984 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21754027..21756984 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtttaattgtgcagctagagagaaggcgatggtgatcaacctagaattcatcagggcgatcgttacggccgatgagatccttctactggatcctctcacgatcgatgtgatcccttttgttgagcaattgacacatcatctccctctcaagaacctggtgtgtgggaatggtcaacctggtggtgatgaccatggggaaaagcatgatgactcgcatggagatcaggtgccccgccttaacgaggccaccggagcagagcacgagttgccatttgaattccaggtgctggagctcgcactcgagaccgtgtgctcatcattcgacgttaacgtgtctggtcttgaaaggcgcgccactccggtacttgaggaactgaccaagaatgtcagcacaaggaatctcgatcgtgtgcgaactctcaagagtgatcttacccgtttgcttgcccatgtgcagaaggtcagagatgaaatagaacatcttctggatgataatgaagacatggcacatctgtatctaacaaggaagcaattacaaaaccagcaagttgaggctttaatatcatcggctgcttccaatagcattgttcctggaggaacaagtctgtccaggttgaacaatagttttcggcgcagcgtgagcatcgctacaagcatgcatttggataatgacgtggaagacctagaaatgttgcttgaggcttacttcatgcaattggatggaattcgcaacagaattttgtcggttcgagagtatattgatgatacagaagactatgtcaatattcaacttgacaaccagcgtaatgaacttattcagcttcagcttacactgactattgcatccttcggcatagctgtcaacaccttcatagctggggcttttgcgatgaacatccagagcaaattgtacagcattgatgatggtagcttcttttggccatttgttgggggcacctcatcgggctgcttcatgatctgcatcgtcttattatggtatgcccggtggaagaagttgctcggtccttga</cdnaseq>

Protein Sequence

<aaseq>MFNCAAREKAMVINLEFIRAIVTADEILLLDPLTIDVIPFVEQL THHLPLKNLVCGNGQPGGDDHGEKHDDSHGDQVPRLNEATGAEHELPFEFQVLELALE TVCSSFDVNVSGLERRATPVLEELTKNVSTRNLDRVRTLKSDLTRLLAHVQKVRDEIE HLLDDNEDMAHLYLTRKQLQNQQVEALISSAASNSIVPGGTSLSRLNNSFRRSVSIAT SMHLDNDVEDLEMLLEAYFMQLDGIRNRILSVREYIDDTEDYVNIQLDNQRNELIQLQ LTLTIASFGIAVNTFIAGAFAMNIQSKLYSIDDGSFFWPFVGGTSSGCFMICIVLLWY ARWKKLLGP</aaseq>

Gene Sequence

<dnaseqindica>2500..2784#1718..2002#506..967#cacgcgacgacctcgccgtcgccgtcgccgccgccgccgccgccatggggaggcgatccggggggaggaagctgcccttcttcgcctcgaacgcctccacgtcgtcctccaccaagcggacccgctcggcgcgccgcctcccctcgctcaccaggccgcgcgcgtcgagctccccatccccggcgtcgccgtccccgccgccgccgtccgcgtcgcaccccgcccctccgtcccctcccctcgccgtatctcccgccggcgccggtaaggtcgggaagaagaaggccggggcgcgcctctggatgcggctcgaccggtggggcgtctccgaaaccctccatctcgacaagggctccatcatccgacgcgccggcctgccgccgcgggacctccggatcctcggccccgtcttctccgactcctccagcatcctcggtgagctcgaccacgcccccattagtatcgattgctgcttagggggtcgcttttgttgtgacaatacacaatgtttaattgtgcagctagagagaaggcgatggtgatcaacctagaattcatcagggcgatcgttacggccgatgagatccttctactggatcctctcacgatcgatgtgatcccttttgttgagcaattgacacatcatctccctctcaagaacctggtgtgtgggaatggtcaacctggtggtgatgaccatggggaaaagcatgatgactcgcatggagatcaggtgccccgccttaacgaggccaccggagcagagcacgagttgccatttgaattccaggtgctggagctcgcactcgagaccgtgtgctcatcattcgacgttaacgtgtctggtcttgaaaggcgcgccactccggtacttgaggaactgaccaagaatgtcagcacaaggaatctcgatcgtgtgcgaactctcaagagtgatcttacccgtttgcttgcccatgtgcagaaggtactattagagatagagtagtgcgtgcctttggtctggcaaagttcaaagttttcatccctgtttgactgtctttattattgcatattaatttgactgatcaaaagctatattcatagtatgttctagctgttcttttctgtggttaaagtttaattgcactaaggggcatggatgatccaaacaggccctaagacaataatatttcttctttggagctatgtggatataactgaacttaaaagcagtaccgaatatttgttcaaaagaatagtgtgcctgacatagccagtataattttaccatctcaaacttataatagttatggttcaccgtggaccaatcaccaactgaagtctgctgtgccgtggtcctgtgtgcacgggggaacaattgtttcatgtacatagagatgttgtagtgcatgtgttgaaagagccaaagtcttcaggtgtatatactttggattatcaaaatacatgtttatataattttagttcttactgtatggttggaacttggggcatataaaacaaaaggtggttataaacaactgattttttttttgttcgtgatgttctatgtacctacctattcatttctttttaaagcttgttgattttattttatatgcagtattgctgctgggtagtttggctgtacttttgagaaccttgatggttacctgcatgctgctctaaacaagggtttcttctgaagatatgtatcttaaccctcatatcatttcaggtcagagatgaaatagaacatcttctggatgataatgaagacatggcacatctgtatctaacaaggaagcaattacaaaaccagcaagttgaggctttaatatcatcggctgcttccaatagcattgttcctggaggaacaagtctgtccaggttgaacaatagttttcggcgcagcgtgagcatcgctacaagcatgcatttggataatgacgtggaagacctagaaatgttgcttgaggcttacttcatgcaattggatggaattcgcaacagaattttgtcggttagtccttttacccatattgaaatggggtagttgcagttttacttggatctacttaatgctatatgacttatcctagtgttcatttggacttattctctgctgacttatcataatgaatataactgtaagttcttgttggagataaattgtaaagatacacagccacgtcttgttcctaaacatatatttgagttagtattcaagttagcatagatgttgaattctttaactactagaagttgctaaacatatatttgagttagtattcaagtttgcaatagatgttgaattctttaactactactagactagaagtagaagttgctaaacatagatttgagttagcaatagatgttgaattctttaactactagaagcacatctctcttttctgatgaagaaacaaggaaagtatatcacttttctgtataattctttggcgcccttatgctatatcttggcgtgacataatttctcgtttgggaattaaacaggttcgagagtatattgatgatacagaagactatgtcaatattcaacttgacaaccagcgtaatgaacttattcagcttcagcttacactgactattgcatccttcggcatagctgtcaacaccttcatagctggggcttttgcgatgaacatccagagcaaattgtacagcattgatgatggtagcttcttttggccatttgttgggggcacctcatcgggctgcttcatgatctgcatcgtcttattatggtatgcccggtggaagaagttgctcggtccttgaacacaatgtaacaagtcacgactcatgagaactgtctcgctgtaaagggcatgcattttgacttgtaacgtctgcagaaaggagcagtcatttgaaacataaaagagaatcctaggattagggagaaactctaatgcatttatgtttcactggtaaataagatacattttctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0545000, RefSeq:Os10g0545000