Os10g0544600

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Revision as of 08:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0544600| Description = Fibrillarin family protein| Version = NM_001071737.1 GI:115483217 GeneID:4349274| Length = 5022 bp| Definition = Or...")
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Gene Name

Os10g0544600

Description

Fibrillarin family protein

Version

NM_001071737.1 GI:115483217 GeneID:4349274

Length

5022 bp

Definition

Oryza sativa Japonica Group Os10g0544600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21727056..21732077

Sequence Coding Region

21727092..21727239,21727311..21727489,21728498..21728581,21729290..21729457,21729744..21729866

Expression

GEO Profiles:Os10g0544600

Genome Context

<gbrowseImage1> name=NC_008403:21727056..21732077 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21727056..21732077 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgcgtctccgagctcctcgtcgtcgtctcctgtggcgccggaggtggtgcaatgggccggcggcgccgacggctttggctcggcggcgatcggcttcgcgtgcagggtgctctgcgccgtcgccacctgcgtcttcgccgcagtggggtcggtggtcggggcggtgaccgggagcgcgatcgggctggcgacggagagcggaatgctgcgcggcgccggcatcggcgccatctccggcgccgtcttctccatcgaggtcgccgagtcgtcgcgcgacctctggcactccagcgactccgccgtctggtgcctcgtctacatggtcgacatcatctccagcctcctgagtggaaggctggtgcgggagaaggtgggtcccgcggttcagagcgcggttcagagtcagataagcgccatcagctcgccgttcgccgagaccagcgacctgttcgagaccggcggcaccaagggtttaccggcggacacgctccgccggctgccggcgatcaagatcaccggcgacaacgccgtcgactccgccggcgagcccatctgctgctccgtgtgcctccaggatttccgcgtaggtgagatggcaagaaggctaccaagctgccggcacgtgtttcacgtgccgtgcatcgactgctggctggtgaggcacggctcctgcccgctgtgccggcgagacatctga</cdnaseq>

Protein Sequence

<aaseq>MDASPSSSSSSPVAPEVVQWAGGADGFGSAAIGFACRVLCAVAT CVFAAVGSVVGAVTGSAIGLATESGMLRGAGIGAISGAVFSIEVAESSRDLWHSSDSA VWCLVYMVDIISSLLSGRLVREKVGPAVQSAVQSQISAISSPFAETSDLFETGGTKGL PADTLRRLPAIKITGDNAVDSAGEPICCSVCLQDFRVGEMARRLPSCRHVFHVPCIDC WLVRHGSCPLCRRDI</aaseq>

Gene Sequence

<dnaseqindica>37..184#256..434#1443..1526#2235..2402#2689..2811#ttgttgttgttggtttggtttgcgagtctgcaaccaatggacgcgtctccgagctcctcgtcgtcgtctcctgtggcgccggaggtggtgcaatgggccggcggcgccgacggctttggctcggcggcgatcggcttcgcgtgcagggtgctctgcgccgtcgccacctgcgtcttcgccgcaggtgcatgcgccggcgcgctctgacacggttgattggttggttcttggtgctgactgcgagtgtgtgtgcagtggggtcggtggtcggggcggtgaccgggagcgcgatcgggctggcgacggagagcggaatgctgcgcggcgccggcatcggcgccatctccggcgccgtcttctccatcgaggtcgccgagtcgtcgcgcgacctctggcactccagcgactccgccgtctggtgcctcgtctacatggtacgcccaaacacacattgcttctctcgtctggcctcccatgatcatctccaagcattccggattatatttttcggagacgcaagagcagagttcagacgaatcaatcattcgctgcagtttttggcctctgaaattcatgttgttttctcctcctctgtttctggaatcattttttcttgagaagggttttttcttacccgacctctacatccaaccggataaaatgcggtattttttacattagaaactattttacattagaaacttagcccttaaaattgcctaatttgaaattcgtttctacgttgatttaaactgaagaccttatgttgatttaaactcaagaccttaaagtgctattcacgttaatgcaactactagactacatgcccttttacaaattcgtttcttgaaacaaattttgtgaaatattctgacaagaattcaactagcattttcaaactgtaaaaggaaatccagggattgggatcatctgacgtgaagtcgaggaacatggtgactgacatataggccccacctctcgcggacctacctatcagtgaccacgtcagaggaagttcacgtcggaggatcctcttccgaaatccagtccatctcaaaaatgatctgaattcgatgacctgttcatgttggggaggtcatggtaagggtatgaacaactgtaaacctgtcaaacaaaacaaactaagcacacttgttttcgctttcagagcttatgtgagcttgatgccgatggaaattaggtgtgccccgaggtttccatgggcaggttttgatgacgctaatcttataatccaaaaacaaaaccagaacatcaaaaaaagatcatctcttgacacatcaaaccatacagtacacataattgaaaaccttctgaacttaactttcttgctgaatttcttgacagcgaaaaatgcccccaaactctcccattcaaacagtcgaatttgacagtgtttttgtactgctgaactgtacacgcaggtcgacatcatctccagcctcctgagtggaaggctggtgcgggagaaggtgggtcccgcggttcagagcgcggttcagagtcaggtaaccactcaacctcagcacaaatgctcccaagttatggctcgccatgctccagattaaattcgcccataagctctctcattctcgcatctatggaggccaccatcacacatgcgttttcttggcctaccactcttacaatttagttaacccttcacagttcagatacatagtgcgtatgatagtagcagtagcagcatttgttagcctgaatctgaaggggaaaaagaattttgttgttcttgttgagttgttctttgagtgggagttggttcatgcattgcccagaagacaaccattgctactcatctaatgcgaccattttttttttcttctgggaaaaggaattgatgggctgatccgtttagtaacatggctgtgcttatcgtgtggatcactcactgtagtgggtaatgagctcatcgcccacaagtgaatgaaagaaacttttttttgtgcgtgtgagagagagagaattcagaaagagacttgcactagtacctaatgattgcaattaactaactaacactaatgtagtggttcggtttgacgtaacaatctgatataatttgctattcagatcatcatagatgctttacaaaaaatgatgattatttttttactgtttcgctgttggaatttaccgcagtttgtaaacctttcgtcagattatttatttatttatctgaatgttacgtttgcttgcagataagcgccatcagctcgccgttcgccgagaccagcgacctgttcgagaccggcggcaccaagggtttaccggcggacacgctccgccggctgccggcgatcaagatcaccggcgacaacgccgtcgactccgccggcgagcccatctgctgctccgtgtgcctccaggttggctactcaccaaatcctcgtctccttttttttttctttttgaaagcatgcacgattcatccgactggcacggttaaatttaggtttatctaaaaatctgatgttagatttttggtaaaaatatgttaaattagtgtaattacatatgtaattttgagacttacattataaatatactaaaattatctatataatttagggacttacaaaataaatatatgctgactgttttcttgtgaaaattataatgacacatttatagcaaatccgttaaattttgcaggatttccgcgtaggtgagatggcaagaaggctaccaagctgccggcacgtgtttcacgtgccgtgcatcgactgctggctggtgaggcacggctcctgcccgctgtgccggcgagacatctgatcgatcgtgatcaaaatctcgcatctgatgaacgatcagttcatgtcatcgtactccgaatcggacacggcgatgaatggtggatcgagttcgtggtacataggttgtgtgtagtagagtagaacgaactactgcatcctgatatccgtaaggggaatgggtgtgagcaagtgattgcaatctcgtgaagatggagagagaatgagaccttccaaaaaaaaatcttttttactgtccttgagtagttaccggaagggaatattgtaccgtggtatctctgttgcgttgaggtatcggaatgtattgtaaatttacagtaaaaatcgttgtaactttaggtatcttttcaagaatactggaggcgaaaaaatggcatgtgtgtagcaatcactttgatgagatgaatgaactggcagaaactgtggataaggaaaagaggacagttgttgcttcagaggttggctcggtgtcattgtggtcgatcctggcttgcgtgtgtctgatggaactctgaagatcttgcaggctctgggactatggccgtatgcttatccttttttaagataatacaaatatatgatatccccggtttctattataagatacacagccaacaagttcttactgaaataagtaaaagtgtggtaggataaattcccagctaccattaagaaattaaaaacagcttaaaaggctaagaatggctgtatgcttatctgttgattctgaacaatgttcagctccagatttcagaattctcactcttcagattgagatggaactgagctgtataggctagccactgtaaaattaggcttttaggcccaaacttctgatgggcctctgctcacagcccagtaatccgttggtgagcccaaactgaggatgactgggcccctcttctcctccttttcacacgtgtatatatgggccaccatcttggtccaataactgcttcaactgctcctagaaccaaagtaccaaactaaattcaggtcaaagaaagaagaaccaaactaaattaaagatcttctagaaacaaatcttgatcaccttattatgctagatgtggacggatcaatcaaaccagcagagggaaagcgacgtaaatccgctgtttaattatgaactcgtggctgccaaattaagacttaagaggcactgaaaaaccagagcttcagatgtgggcggtccctgattttggttagggaatttggttcttccttcttttcttcagttcctactccctttggcccccagccaacaaaaattcaaatgcatgcatcgaaccaaacagattatgatgcatcattgcttgcgttccggtttgtttctgaacactgacgtcgtcctggtgcctgcgacggcatctgcatgcatcctcctccgttttattttaaaattacttgcaagattatctcaaaatacaactatttatcttccaactttctcatctcaacagatcataatcatttctcatttcaaccttaatcttttaagaaaatgcattactcctaaatgcttaatccatcttaaaatatagtaacatagtgcttgattagattgtagttcatattcgttgaacgtggacagaatcgctatattgtgtaccataggataaaggaagtaattatatttgagaccgaacgaatagtccgatatggatgacacatgcatgtcagattgtcagctatctgctcccttgcagagtcagaaatggaagacggggccagaattcagctgcgacgaagcagcagacaacgctcgacatggagccgtagtacatgagcgtgtatacaacgacttgacaattgtgttgaagaaccaaccactcgacgagtcgacggagacttaaatattatagttttgtgctctgggtttaagctctgatctgatcattgagcattatttgtctgatgctaattaaggtcaaaactacacttgtctatatcgattagcatatttggagagacacgtgtatatagctggggtcactgtggcacacaagccctgatgtatcatatccataagtataagcagatattcacgcgactagctaccttagttaattccagatgtctgatggttacagcgtatataaacagttaaaacacacgttgaacttcccccaactctgcatgttttccttgcctctcttatgatcgatgatagagacatagagtatataatctaagatcatacgatgatatg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0544600, RefSeq:Os10g0544600