Os10g0545500

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Revision as of 08:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0545500| Description = Similar to Cellulase (EC 3.2.1.4) (Fragment)| Version = NM_001071744.2 GI:297610858 GeneID:4349281| Length = 1764 bp...")
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Gene Name

Os10g0545500

Description

Similar to Cellulase (EC 3.2.1.4) (Fragment)

Version

NM_001071744.2 GI:297610858 GeneID:4349281

Length

1764 bp

Definition

Oryza sativa Japonica Group Os10g0545500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21775516..21777279

Sequence Coding Region

21775516..21775753,21775864..21775964,21776055..21776272,21776916..21777279

Expression

GEO Profiles:Os10g0545500

Genome Context

<gbrowseImage1> name=NC_008403:21775516..21777279 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21775516..21777279 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaaggcctggtagtggtaacatcccaggatcagcatgcattcctcttctgattctgctgctgctgctgctgctactgcatccatcagaagctcagccttctcctggctactacccaagcaagatgttcaggtcgatggccttctatgaagggtacagcaccctgtggggcccacagcaccagaccctgtcccaggatcagaagtctctcaccctgtggatggaccgtagctcagggagcgggttcaagtcgacacggtcgtaccggaacggctacttcggggcgtcgatcagggtgcagccgggctacaccgccggcgtcaacacggccttctacctgtcgaacacggagcagtacccggggcaccacgacgagatcgacatggagctgctggggacggtgccgggggagccgtacacgctgcagacgaacgtctacgtgcgcggctccggcgacggcaacatcgtcggccgcgagatgcgcttccacctctggttcgaccccaccgccggcttccaccactacgccatcctctggaaccccgaccaaatcttgttcttggtggacgacgtgccgatcaggaggtacgagaagaaggtggaggggacgttcccggagcgggagatgtgggcgtacggatccatctgggacgcctccgactgggccaccgacggcggccgctaccgcgccgactaccgctaccagcccttcgtctcccgcttcgccgacctcaaggtcggcggctgcgccaccgccgcgccgccggcgtgcagccccgtgccggcgtcgtccggcggcggctccgcggcgctcagcccgcagcaggaggccgccatggcgtgggcgcagcgcaacgccatggtctactactactgccaggattactccagggatcacaccttctaccccgagtgctga</cdnaseq>

Protein Sequence

<aaseq>MARPGSGNIPGSACIPLLILLLLLLLLHPSEAQPSPGYYPSKMF RSMAFYEGYSTLWGPQHQTLSQDQKSLTLWMDRSSGSGFKSTRSYRNGYFGASIRVQP GYTAGVNTAFYLSNTEQYPGHHDEIDMELLGTVPGEPYTLQTNVYVRGSGDGNIVGRE MRFHLWFDPTAGFHHYAILWNPDQILFLVDDVPIRRYEKKVEGTFPEREMWAYGSIWD ASDWATDGGRYRADYRYQPFVSRFADLKVGGCATAAPPACSPVPASSGGGSAALSPQQ EAAMAWAQRNAMVYYYCQDYSRDHTFYPEC</aaseq>

Gene Sequence

<dnaseqindica>1..238#349..449#540..757#1401..1764#atggcaaggcctggtagtggtaacatcccaggatcagcatgcattcctcttctgattctgctgctgctgctgctgctactgcatccatcagaagctcagccttctcctggctactacccaagcaagatgttcaggtcgatggccttctatgaagggtacagcaccctgtggggcccacagcaccagaccctgtcccaggatcagaagtctctcaccctgtggatggaccgtagctcaggtatgtctgtactctctgttcatcttaagcctttgagtgaaactggtagttgacttgtaaatacttttcggcttttgggttgaactgatcggtcgattcgatgctgatagggagcgggttcaagtcgacacggtcgtaccggaacggctacttcggggcgtcgatcagggtgcagccgggctacaccgccggcgtcaacacggccttctacgtattgatcaacttttgtcatgcaaatttcagtgaaatgtgcagtagaatttcgctgaaaaagttatgtttttgtgttgtatggatgcagctgtcgaacacggagcagtacccggggcaccacgacgagatcgacatggagctgctggggacggtgccgggggagccgtacacgctgcagacgaacgtctacgtgcgcggctccggcgacggcaacatcgtcggccgcgagatgcgcttccacctctggttcgaccccaccgccggcttccaccactacgccatcctctggaaccccgaccaaatcttgtaagcattcaaagtctcatgtaagtttgcatgtaactcatgcggcgatcgttgaaaaaccgtgtgctcaatcagtaaattagagcttgtttcgaacgtaacgaattttacagggtttttacgtgatttagaaatacagtacaaacgctcacatccacacttatgaacgcacacacatattcggtataccctatccctataagcatctccgaaagactagaccagcatatcttaagacgtcctactatagattgatacgccgcctatcattaaaagaataattagccataaatacgagtactcatgttaagcatcttacataatttatttaaaattcctccgtttcatcgagatcctaattaattgcatcgatcaaaatgaatatcattatatatatcatttcatagcgcaggtcatgctatgaaatgacatataatttttttgtttgttctccgagttttttcccatagtttttctataatcagtatttatcattatatatatatatatgtcatttcatagggcagtaattgtagtactggactagtgagtgtgatttttaaccgacaaatcaaattaaattagtgcgaggtagtaattaattaaactaagcaagctgctgccgacggtggcgagtggtcaggttcttggtggacgacgtgccgatcaggaggtacgagaagaaggtggaggggacgttcccggagcgggagatgtgggcgtacggatccatctgggacgcctccgactgggccaccgacggcggccgctaccgcgccgactaccgctaccagcccttcgtctcccgcttcgccgacctcaaggtcggcggctgcgccaccgccgcgccgccggcgtgcagccccgtgccggcgtcgtccggcggcggctccgcggcgctcagcccgcagcaggaggccgccatggcgtgggcgcagcgcaacgccatggtctactactactgccaggattactccagggatcacaccttctaccccgagtgctga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0545500, RefSeq:Os10g0545500