Os10g0554100

From RiceWiki
Revision as of 08:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0554100| Description = Oxysterol-binding protein family protein| Version = NM_001071872.1 GI:115483339 GeneID:4349338| Length = 2511 bp| D...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0554100

Description

Oxysterol-binding protein family protein

Version

NM_001071872.1 GI:115483339 GeneID:4349338

Length

2511 bp

Definition

Oryza sativa Japonica Group Os10g0554100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22207623..22210133

Sequence Coding Region

22207944..22208087,22208304..22208471,22208625..22208765,22208848..22209084,22209165..22209278
,22209551..22209727

Expression

GEO Profiles:Os10g0554100

Genome Context

<gbrowseImage1> name=NC_008403:22207623..22210133 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22207623..22210133 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagaattctttatgttgctgcatttgctgtctctggatatgcttccacggattctcgcccctgcaaacctttcaatccattgttgggggaaacatacgaagctgattatcctgaaaaagggatccgtttcttctctgaaaaggttagtcatcatccgatggtcatggcatgccattgtgaagggaaaggttggaaattttggggtgacagcaatctaaagagcaaattttgggggcagtccattcaactcgatcctagcggtgtgctaactctacagtttgatgatggagaaactttccagtggagtaaggttacgacaacaattaataaccttatcattggccgagtctattgccatcaccatggcacgatgaacataagtggaaacaggcaatattcatgtaagctgactttcaaagagcaatccttcctcgatcgtaatcctcgccaggttcaaggacttgttacggatgctaatgggaccaaagttgcattcttgatgggaaagtgggacgagagcatgtcttgcatcattggtgatgatgcttctaaagtgaactcccgtaatgcaaatcagagtacgggtgccactttattgtgggagaaaaatgtgcctccagccaatcccactcgatataacctgtcatcatttgcaatcactttgaacgagttgacaccaggtcttaaggagaagcttccaccaacggattcaagactcaggccagatcagcggcatctagagaatggggagtacgaaaaggctaactctgaaaaattgcgcctggagacgaggcagaggatggcaaggaagatgcaggagagtggttggaagccaagatggttccaaagggacacagaggatggaacattccgttatgtcggaggttactgggaggcaagggagcagaggaaatgggttggttgcaatgacatattcggcaataatgtgtccactctttgcaccagcgcaagtatatag</cdnaseq>

Protein Sequence

<aaseq>MRILYVAAFAVSGYASTDSRPCKPFNPLLGETYEADYPEKGIRF FSEKVSHHPMVMACHCEGKGWKFWGDSNLKSKFWGQSIQLDPSGVLTLQFDDGETFQW SKVTTTINNLIIGRVYCHHHGTMNISGNRQYSCKLTFKEQSFLDRNPRQVQGLVTDAN GTKVAFLMGKWDESMSCIIGDDASKVNSRNANQSTGATLLWEKNVPPANPTRYNLSSF AITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYEKANSEKLRLETRQRMARKMQESG WKPRWFQRDTEDGTFRYVGGYWEAREQRKWVGCNDIFGNNVSTLCTSASI</aaseq>

Gene Sequence

<dnaseqindica>322..465#682..849#1003..1143#1226..1462#1543..1656#1929..2105#ttcctgtttactttaatgaaccattgtcttctcttcaaaagtgctttgaagatttggagtattccaatttactggatcgtgcatatgaatatggttcaagggtatgcttatttctataacttccacctttattgtgaaataaactgctagatattatatcattctgtatatcacaattgaggagcataaactttgtcgtactaaaaaacccacgaaattgctgtatcagtattttggtgcagttaattaacctcaatttattcaactgtgttgagttgatactcatatcttaatttgcatatacatcagggaaacgggctgatgagaattctttatgttgctgcatttgctgtctctggatatgcttccacggattctcgcccctgcaaacctttcaatccattgttgggggaaacatacgaagctgattatcctgaaaaagggatccgtttcttctctgaaaaggtcagtttggcatccagcccattcatgttcaggttagaatttgttgccatttagtctagcactgtcaaattcttctgtaaataattgggagatacgcaatgtgaagtttgaaagcataaaagtggcagacactgttctgatgccaggcacattaatattcttctctacatttcacacaacatatgagttaatttgttagtttattcttgtcaccaggttagtcatcatccgatggtcatggcatgccattgtgaagggaaaggttggaaattttggggtgacagcaatctaaagagcaaattttgggggcagtccattcaactcgatcctagcggtgtgctaactctacagtttgatgatggagaaactttccagtggagtaaggtacaaattcttcactggaggcaaaactcttatgcatattttctctccattttttccattatgtttgtgcatgcttggtctagagatctggagaaggtgttggatatccttttgtcaataaacacctatcatttatttattttgccatggcaggttacgacaacaattaataaccttatcattggccgagtctattgccatcaccatggcacgatgaacataagtggaaacaggcaatattcatgtaagctgactttcaaagagcaatccttcctcgatcgtaatcctcgccaggtatgatgaacaattttccatccaggttcttgtttctttcatcttcctgtagaggttactaaaatgtatggtcgtatgaaaggttcaaggacttgttacggatgctaatgggaccaaagttgcattcttgatgggaaagtgggacgagagcatgtcttgcatcattggtgatgatgcttctaaagtgaactcccgtaatgcaaatcagagtacgggtgccactttattgtgggagaaaaatgtgcctccagccaatcccactcgatataacctgtcatcatttgcaatcactttgaacgagttgacaccaggtcttaaggtatgcgcaaagcatataattcgcctattgttagttttttgtagtgcaaagcctaacgtactatttgatgatttgttaaggagaagcttccaccaacggattcaagactcaggccagatcagcggcatctagagaatggggagtacgaaaaggctaactctgaaaaattgcgcctggagacgaggcagaggatggtaagtattcttgttctaaaaatttccttaattttttttatcacagtttttaaattcttacctgcttcactgtactcgtacatcgaactacactgaattttatggtcttttatcactgcacttttatatatgtccaccatctgatgggagtgaatcactgccccggagaatcttgattctcgttacaaagtgcagccagaacacctatttccttcatggaaaaatgcagttattatctgctctaactgcagcggttatctcttcctctacaggcaaggaagatgcaggagagtggttggaagccaagatggttccaaagggacacagaggatggaacattccgttatgtcggaggttactgggaggcaagggagcagaggaaatgggttggttgcaatgacatattcggcaataatgtgtccactctttgcaccagcgcaagtatatagagaaacttctgtttagtagtcgttgacaccccattaattattgaagacggtacatagttgatcggctgctcccgttgctaccatgcaaacaagagctaacatgctctcctcttgtcatatagaaacactgggacatttatgtggatactgggatacttaactgtgaggcctgctagctaacaatgttgttattactctcagtgatatccattttttcaatctttgtactgttccacagagatactgagttatatacttggttcctaattgtaattgatcatgtaagcttctatgctcatggtcatggataatggacgttcatctttcttttttgacctctgtgccaagccaggcgagtaatcttgtcctgtatagaaatgccaaattaatatattcaatttcctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0554100, RefSeq:Os10g0554100