Os10g0555300

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Revision as of 08:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0555300| Description = Zinc finger, C2H2-type domain containing protein| Version = NM_001071879.1 GI:115483353 GeneID:4349345| Length = 168...")
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Gene Name

Os10g0555300

Description

Zinc finger, C2H2-type domain containing protein

Version

NM_001071879.1 GI:115483353 GeneID:4349345

Length

1682 bp

Definition

Oryza sativa Japonica Group Os10g0555300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22264551..22266232

Sequence Coding Region

22264849..22265928

Expression

GEO Profiles:Os10g0555300

Genome Context

<gbrowseImage1> name=NC_008403:22264551..22266232 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22264551..22266232 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaagcacacttgcaagctctgcttccgccgattccacaatggccgcgctctcggcggccacatgcgctcccatgtcatggccgccgccgcggccgccgcgtactgtccgtcgtcgccggcgatgtcactggcgtccacgtcgtcgacggagatcgagatggatgagaagaaggagatgacgaagaagacggagcaggagaagacgctgacgtcgtacgtgttgcgcgagaatcccaagaggagctacaaggtgagcgccggtgaattctccggtggtggtggtggtggtggtggcggcggcgagtcgtcggtcgtgcaggacggcgagagcgacacggagtcgtccccgccgcgcggcggagcggggtcgttcttcgccgtgagccggaggcggtcgaagcgggcgcggcggcggcgtcgcgcgccggatcccgaaccggcgagcagcgtctccgacgcgacgacggaggaggacgtggccatgtcgctcttgatgctgtctcgggactcgtggacgcgttccagatccgagcacgagacccaccaccggggggcgagctcggaggccgagcagaacaacaacaacgtcgtcaacgtgttcgacgaagaagacgaggacgcccgcgacgtggccggcgaggatcacgacgaggagctcagctacggcggcggcgaggcggcggcggcgcgccaccgcaccagcaggttccagtgcggcgcatgcaggaaggtgttccggtcgtaccaggcgctcggcggccaccgcgcgagcctcaagagaggcaagggcggcggctgcgtgccaccgccacgtccggcgccggcgagctccgccgccgcgccggccatccacgagtgcccattctgcttccgcgtgttcgactccggccaggccctgggcggccacaagcgcgcccacatgccatccggcggcgcgcggccctcgccctcgccgtctccggcgaaatgcggcgagagctccggctccatcgatctcaacatgccggcgacaatggaggacgacttcgagctctccgccgtgtacgacgccgagttcgccagcacgagacagtga</cdnaseq>

Protein Sequence

<aaseq>MDKHTCKLCFRRFHNGRALGGHMRSHVMAAAAAAAYCPSSPAMS LASTSSTEIEMDEKKEMTKKTEQEKTLTSYVLRENPKRSYKVSAGEFSGGGGGGGGGG ESSVVQDGESDTESSPPRGGAGSFFAVSRRRSKRARRRRRAPDPEPASSVSDATTEED VAMSLLMLSRDSWTRSRSEHETHHRGASSEAEQNNNNVVNVFDEEDEDARDVAGEDHD EELSYGGGEAAAARHRTSRFQCGACRKVFRSYQALGGHRASLKRGKGGGCVPPPRPAP ASSAAAPAIHECPFCFRVFDSGQALGGHKRAHMPSGGARPSPSPSPAKCGESSGSIDL NMPATMEDDFELSAVYDAEFASTRQ</aaseq>

Gene Sequence

<dnaseqindica>305..1384#acttgttttctttcagtctttctttcttcttcttgtttgctgatcttgttccttggtggaaggatgcttgtcacctactcctttttgagttccccactctcctcacacttgttctacctctcttccccataaaactattatcatctttggagccaaaagccaaccaagaggagaaagcaaagggaggagaaaagaagcaagcaaagcaaagcaagaagcaagaagcagctgctcagctcagctcaagcaagtaagtgaattcttgcttgatcgatccatcgatcgatcgatcggtttgctggtgatggacaagcacacttgcaagctctgcttccgccgattccacaatggccgcgctctcggcggccacatgcgctcccatgtcatggccgccgccgcggccgccgcgtactgtccgtcgtcgccggcgatgtcactggcgtccacgtcgtcgacggagatcgagatggatgagaagaaggagatgacgaagaagacggagcaggagaagacgctgacgtcgtacgtgttgcgcgagaatcccaagaggagctacaaggtgagcgccggtgaattctccggtggtggtggtggtggtggtggcggcggcgagtcgtcggtcgtgcaggacggcgagagcgacacggagtcgtccccgccgcgcggcggagcggggtcgttcttcgccgtgagccggaggcggtcgaagcgggcgcggcggcggcgtcgcgcgccggatcccgaaccggcgagcagcgtctccgacgcgacgacggaggaggacgtggccatgtcgctcttgatgctgtctcgggactcgtggacgcgttccagatccgagcacgagacccaccaccggggggcgagctcggaggccgagcagaacaacaacaacgtcgtcaacgtgttcgacgaagaagacgaggacgcccgcgacgtggccggcgaggatcacgacgaggagctcagctacggcggcggcgaggcggcggcggcgcgccaccgcaccagcaggttccagtgcggcgcatgcaggaaggtgttccggtcgtaccaggcgctcggcggccaccgcgcgagcctcaagagaggcaagggcggcggctgcgtgccaccgccacgtccggcgccggcgagctccgccgccgcgccggccatccacgagtgcccattctgcttccgcgtgttcgactccggccaggccctgggcggccacaagcgcgcccacatgccatccggcggcgcgcggccctcgccctcgccgtctccggcgaaatgcggcgagagctccggctccatcgatctcaacatgccggcgacaatggaggacgacttcgagctctccgccgtgtacgacgccgagttcgccagcacgagacagtgaccacacaccaccaaccagctgatcatccatggctgccaactccagatcaccaagaaatcggtaggacaaactgcttcctagctgcatgcaaggatggattcattcgaggtaagaagctctgcatctcttgcaagaaccagaataccagatcatggagaattctctgtcttgttgcttaagcttcagttactgttgctgttgctgctattgctagagctgaaaattcagttgagcagctgaaaattctttttttcattttgggcgctctgtatctaaatcaaattgatatttttgctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0555300, RefSeq:Os10g0555300