Os10g0555600

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Revision as of 08:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0555600| Description = Beta-expansin precursor| Version = NM_001071881.1 GI:115483357 GeneID:4349347| Length = 1537 bp| Definition = Oryza...")
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Gene Name

Os10g0555600

Description

Beta-expansin precursor

Version

NM_001071881.1 GI:115483357 GeneID:4349347

Length

1537 bp

Definition

Oryza sativa Japonica Group Os10g0555600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22285436..22286972

Sequence Coding Region

22285756..22286283,22286456..22286565,22286670..22286859

Expression

GEO Profiles:Os10g0555600

Genome Context

<gbrowseImage1> name=NC_008403:22285436..22286972 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22285436..22286972 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagccagaatgggcagcaaggtcgctgcaatcctcgcgattctgtccgtgctcgtggtgcatggctcttgcaaggggcatcctgtgaactacaacgtctccgacgcctccgcctacggctccggctggctccctgcccgggcaacctggtatggcgctcccaccggcgccggccctgacgacaacggcggcgcttgcgggttcaagaacgtgaaccagtacccattctcgtccatgacctcctgcggcaacgagcccatcttcaaggacggcaagggctgcggctcatgctaccagatcaggtgcaacaaggacccgtcgtgctcgggcaacatcgagacggtgatcatcaccgacatgaactactaccccgtggccaggtaccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggctcaacgacaagctccgccactcgggcatcatcgacatccagttcaggcgcgtcccctgcaactacccgggcctcaagatcaacttccacgtcgaggagggctccaacccggtgtacttcgccgtgctcgtcgagtacgaggacctcgacggcgacgtcgtgcaggtcgacctcatggagtccaagtcggcgtacggcggcgccaccggcgtctggacgccgatgagggagtcgtggggctccatctggcgcctcgactccaaccaccgcctccaggcgcccttctccctccgcatccgcagcgactccggcaagacgctcgtcgccaacaacgtcatcccggcgaactggtcccccaactccaactaccgctccatcgtccagttcagctag</cdnaseq>

Protein Sequence

<aaseq>MAARMGSKVAAILAILSVLVVHGSCKGHPVNYNVSDASAYGSGW LPARATWYGAPTGAGPDDNGGACGFKNVNQYPFSSMTSCGNEPIFKDGKGCGSCYQIR CNKDPSCSGNIETVIITDMNYYPVARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQF RRVPCNYPGLKINFHVEEGSNPVYFAVLVEYEDLDGDVVQVDLMESKSAYGGATGVWT PMRESWGSIWRLDSNHRLQAPFSLRIRSDSGKTLVANNVIPANWSPNSNYRSIVQFS</aaseq>

Gene Sequence

<dnaseqindica>690..1217#408..517#114..303#aaccatcaaaccacacaccagacaatacttactaccactactactgctgctgctgccagttctagctagcctactgctcttctccgagctgaagatttttcgagctagctaggatggcagccagaatgggcagcaaggtcgctgcaatcctcgcgattctgtccgtgctcgtggtgcatggctcttgcaaggggcatcctgtgaactacaacgtctccgacgcctccgcctacggctccggctggctccctgcccgggcaacctggtatggcgctcccaccggcgccggccctgacgacaacggtgcgcattttgcagctactgatgatgcttgtggtgctcatctgtgcttttgcttggtctctgaactgacgcattggcattatttggtcggttttaatttgcaggcggcgcttgcgggttcaagaacgtgaaccagtacccattctcgtccatgacctcctgcggcaacgagcccatcttcaaggacggcaagggctgcggctcatgctaccaggtacgaaaaaactagtcaaattacttcaccatggcaccaattttgcaattagcaatcatttgatttgattggtcaggacgtactactactacatttttctatagcatgcatgtaggagtaacatgcagtgcggcacattttgttgaccatttgtttgacttggttgttacagatcaggtgcaacaaggacccgtcgtgctcgggcaacatcgagacggtgatcatcaccgacatgaactactaccccgtggccaggtaccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggctcaacgacaagctccgccactcgggcatcatcgacatccagttcaggcgcgtcccctgcaactacccgggcctcaagatcaacttccacgtcgaggagggctccaacccggtgtacttcgccgtgctcgtcgagtacgaggacctcgacggcgacgtcgtgcaggtcgacctcatggagtccaagtcggcgtacggcggcgccaccggcgtctggacgccgatgagggagtcgtggggctccatctggcgcctcgactccaaccaccgcctccaggcgcccttctccctccgcatccgcagcgactccggcaagacgctcgtcgccaacaacgtcatcccggcgaactggtcccccaactccaactaccgctccatcgtccagttcagctagatcaatcatccactgctgatcgaatatggaatcatattggctcgcgatcgatcgatcgatcgattagtttattctctactactgctgctgcaaaatttgcgtgggattgaggtgtttttttttattaggcgaggcctcatgtgctgtctggtctagtgtgtgaagtggtgaagtgatgcatgtgtgggaaaatggaggaggggcacagtaatacagtatgtgcatgtgctctcccgcccactgtcactgtactacccagtgctttgtaaccaaatcttaaggctacagaattataaatacaatgcttaagttaattacct</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0555600, RefSeq:Os10g0555600