Os10g0555900

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Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0555900| Description = Beta-expansin precursor| Version = NM_001071883.1 GI:115483361 GeneID:4349349| Length = 1895 bp| Definition = Oryza...")
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Gene Name

Os10g0555900

Description

Beta-expansin precursor

Version

NM_001071883.1 GI:115483361 GeneID:4349349

Length

1895 bp

Definition

Oryza sativa Japonica Group Os10g0555900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22303106..22305000

Sequence Coding Region

22303503..22303830,22304176..22304360,22304497..22304606,22304710..22304893

Expression

GEO Profiles:Os10g0555900

Genome Context

<gbrowseImage1> name=NC_008403:22303106..22305000 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22303106..22305000 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctttttccatctccaagaaggctgcagttgctgcactcttctccttccttgttgtcacctgcgtcgccggcgccaggccggggaacttcagcgcctccgacttcaccgccgatcccaactgggaagtcgccagggccacctggtacggcgctcccaccggcgccggccctgacgacgatggcggtgcttgcgggttcaagaacaccaaccagtacccgttctcgtcgatgacctcctgcggcaacgagcctatcttcaaggacgggaagggctgtggctcatgctaccagataagatgcgtcaaccaccctgcctgctccggcaacccggagacggtgatcatcaccgacatgaactactaccccgtttccaagtaccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccagctccgccacgccggcatcatcgacatccagttcaagagggtgccgtgcaacttccctgggctgaaggtgacgttccacgtggaggaggggtcgaacccggtgtacttcgcggtgctggttgagtacgaggacggcgacggcgacgtggtgcaggtggatctcatggaggccaactcccagtcgtggacgccgatgcgcgagtcgtggggctccatctggaggctcgactccaaccaccgcctcacggcgcccttctcgctccgcatcaccaacgagtccggcaagcagctcgtcgccagccaggtcatcccggccaactgggcccccatggccgtctaccgttctttcgtccagtacagcagctaa</cdnaseq>

Protein Sequence

<aaseq>MAFSISKKAAVAALFSFLVVTCVAGARPGNFSASDFTADPNWEV ARATWYGAPTGAGPDDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCV NHPACSGNPETVIITDMNYYPVSKYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKR VPCNFPGLKVTFHVEEGSNPVYFAVLVEYEDGDGDVVQVDLMEANSQSWTPMRESWGS IWRLDSNHRLTAPFSLRITNESGKQLVASQVIPANWAPMAVYRSFVQYSS</aaseq>

Gene Sequence

<dnaseqindica>1171..1498#641..825#395..504#108..291#accaaaacaaagctcagaatcctacctgactagtactaccactactagctagtagcgagctactctctctggtcatcaagctttgagtggttggagtggtggcagctatggctttttccatctccaagaaggctgcagttgctgcactcttctccttccttgttgtcacctgcgtcgccggcgccaggccggggaacttcagcgcctccgacttcaccgccgatcccaactgggaagtcgccagggccacctggtacggcgctcccaccggcgccggccctgacgacgatggtacgtttgccggtgcacctcggcgactgatcattccatcgagatgaaccaattacgttgtataattgaactgttataaataagtgtggtgttgatgctgcaggcggtgcttgcgggttcaagaacaccaaccagtacccgttctcgtcgatgacctcctgcggcaacgagcctatcttcaaggacgggaagggctgtggctcatgctaccaggtacactaaagattcagctcaaatttgcaatgacgacgggcgttgagccgttgatgcgaagcgactgatcgagacgtaggtattcacagtgttgttgactgtttgttgctggtgcatggcttctttttttcttcagataagatgcgtcaaccaccctgcctgctccggcaacccggagacggtgatcatcaccgacatgaactactaccccgtttccaagtaccacttcgacctgagcggcacggcgttcggcgccatggccaagccggggcagaacgaccagctccgccacgccggcatcatcgacatccagttcaagaggtaatagtttagtagtaggctagtagctcctgcaggctgcacgaacagaagcatcatcatggccaccccttgccttgcagttgctagcttgtgccgtcgtggagccctcgtacttttgggtgcaaacccgacagcgacattgcttgtatgtcctccgggacccaagcagattctgatcgcacaaataccactaaaactcttttaattaagtacatgcagccgctttacaatttgtcgcctctgcctgtcatcacctactactatactgccttgcatactcactctgaattaatctgataagaatgtaacactaacacatggattgttgggggtttggccatgcagggtgccgtgcaacttccctgggctgaaggtgacgttccacgtggaggaggggtcgaacccggtgtacttcgcggtgctggttgagtacgaggacggcgacggcgacgtggtgcaggtggatctcatggaggccaactcccagtcgtggacgccgatgcgcgagtcgtggggctccatctggaggctcgactccaaccaccgcctcacggcgcccttctcgctccgcatcaccaacgagtccggcaagcagctcgtcgccagccaggtcatcccggccaactgggcccccatggccgtctaccgttctttcgtccagtacagcagctaagccaatgatcaagaacaagcataattcatgcctactatagcagcagcagaagcagcattagctactatacatacctctacgtacgacatttgagatcgatcgtttggccatttttatctgctcgggtattgattagctctccctcggtattgtatggatttgcatggatggttcattaatctgtcatcaggagttcgttttgagtaggtgagacgtcggttgttgggtgtcatatagacatcgctcggtgtcttgaggttgagagtgggataaggaggaggcaaagtttgcatgtgctgtcccgcccactctcactgtaccagtgtcactgtttgtgtaaccagaacaaaggtcataaattatactactagtatacagtttgctgcctggcattcag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0555900, RefSeq:Os10g0555900