Os10g0557600

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Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0557600| Description = Zinc finger, GATA-type domain containing protein| Version = NM_001071890.2 GI:297610909 GeneID:4349356| Length = 189...")
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Gene Name

Os10g0557600

Description

Zinc finger, GATA-type domain containing protein

Version

NM_001071890.2 GI:297610909 GeneID:4349356

Length

1890 bp

Definition

Oryza sativa Japonica Group Os10g0557600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22398569..22400458

Sequence Coding Region

22399396..22400178

Expression

GEO Profiles:Os10g0557600

Genome Context

<gbrowseImage1> name=NC_008403:22398569..22400458 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22398569..22400458 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatggatgtgtgtgttgatggggttcagaccgaggacgctgccgagctggagtggctatccaagttcgtcgacgactcctactccgacatgccgaattaccagtcgtccgcgcacgccgcaatggcggcggcggctgcttccgcggccaacaacggcggcggcagctcggccggccaagacagctgcctcacggcggcgcctggccgcggcgcccgtagcaagaggtcgcgcgcgacggccgcggccgccgccgcgtggcactccctcgtcccgcgcccgccgtcccagtcgtcgccgtcgtcgtcgtgctcgtcgtccgacttcccgtcctcgaacaagccatcgggcaccgcgaggccgaacggctcaggaggcggcagccgcggcaagaagagccccggccccgcgggggcggaggtgggcatggaggccggcgtgcggcggtgcacgcactgcgcgtcggagaagacgccgcagtggcggacggggcccctgggccccaagaccctgtgcaacgcgtgcggcgtgaggttcaagtccgggcggctgatgccggagtacaggccggcggcgagccccacgttcgtgctgacgcagcactccaactcccaccgcaaggtcatggagctgcgccgccagaaggagctcctcatcatccgcggcagccaccgcgacgccgccgcggccgcagcagcagccgccgccgccgccgccgcgggatccgccgcggcgaccgggaggccggagctcatgttccgcgactacggcgtgtgctga</cdnaseq>

Protein Sequence

<aaseq>MAMDVCVDGVQTEDAAELEWLSKFVDDSYSDMPNYQSSAHAAMA AAAASAANNGGGSSAGQDSCLTAAPGRGARSKRSRATAAAAAAWHSLVPRPPSQSSPS SSCSSSDFPSSNKPSGTARPNGSGGGSRGKKSPGPAGAEVGMEAGVRRCTHCASEKTP QWRTGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVLTQHSNSHRKVMELRRQKEL LIIRGSHRDAAAAAAAAAAAAAAGSAAATGRPELMFRDYGVC</aaseq>

Gene Sequence

<dnaseqindica>828..1610#tggtgagcgacttggagctcttcaaagccccagcactatttctcctcccccttcctcctcctcctcctcatgagctcctcctctcatcagtcatcactacactcacttagctagtggcaaaaagatagatagctctagctcgtactgcatcaaacgggcggtagttgcactgcccgtttcaagggaactccagtgacaaccagcttcttgccaattcagaacgtgaccgtgtggtacgtacggccaaggcagtggctagctcgcgatggcgtcggagtgggaaatggccatgggcgtcgacctcggcatggggatgagcacgtaccacaacgcctccggtggcatcgccgccgcgccgatgatgggccaccacggcggaggaggcggcggcggcgggtactccgccgcgcaccaccaccaccaccattactacgggatgcctcatcaggcggcgatgggcgacgccatgcgcgtcgacgacctcctcgacctctccaacactcccggcgcccacgacttcttcccggcctccgctgccgccgccgccgcaggtgaccacgggcaccaccaccaccaccacatcggcggcatgggcgagccgtcgggcgccacgccgtcggccacgtcgtcagatcaccagacgtcgatgctctccttcgccgacgacttctacatacccgtaagcaccctggataattcgagatcgcacgcaaagctagccacttgcatatgcacgcatgcacatacccttgtgaattttgcatatgaagttagctagagtgcttaattttgaggcttgatgagatcaaacgggtttgagctgaacaatggcgatggatgtgtgtgttgatggggttcagaccgaggacgctgccgagctggagtggctatccaagttcgtcgacgactcctactccgacatgccgaattaccagtcgtccgcgcacgccgcaatggcggcggcggctgcttccgcggccaacaacggcggcggcagctcggccggccaagacagctgcctcacggcggcgcctggccgcggcgcccgtagcaagaggtcgcgcgcgacggccgcggccgccgccgcgtggcactccctcgtcccgcgcccgccgtcccagtcgtcgccgtcgtcgtcgtgctcgtcgtccgacttcccgtcctcgaacaagccatcgggcaccgcgaggccgaacggctcaggaggcggcagccgcggcaagaagagccccggccccgcgggggcggaggtgggcatggaggccggcgtgcggcggtgcacgcactgcgcgtcggagaagacgccgcagtggcggacggggcccctgggccccaagaccctgtgcaacgcgtgcggcgtgaggttcaagtccgggcggctgatgccggagtacaggccggcggcgagccccacgttcgtgctgacgcagcactccaactcccaccgcaaggtcatggagctgcgccgccagaaggagctcctcatcatccgcggcagccaccgcgacgccgccgcggccgcagcagcagccgccgccgccgccgccgcgggatccgccgcggcgaccgggaggccggagctcatgttccgcgactacggcgtgtgctgatcaagcggcgcacgcggcgtccagagcgagccatgcaggcgcagctacgcatcacatcgcatgcatggatggatgcatgcacagcacagacgcgcgggcttagatccttttgcgaaattctcccgtctccctttctcttgtttatttcctctccctttttttctcttttttgccttattccagatatttttcaatgcttttttgttaattaatttgttggtacctacctcccttgcaagttcttcctcctctatgagagagatcaatcaattctgttggt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0557600, RefSeq:Os10g0557600