Os10g0558200

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Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0558200| Description = 2OG-Fe(II) oxygenase domain containing protein| Version = NM_001071894.2 GI:297610915 GeneID:4349360| Length = 1577 ...")
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Gene Name

Os10g0558200

Description

2OG-Fe(II) oxygenase domain containing protein

Version

NM_001071894.2 GI:297610915 GeneID:4349360

Length

1577 bp

Definition

Oryza sativa Japonica Group Os10g0558200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22424203..22425779

Sequence Coding Region

22424203..22424448,22424591..22424915,22425113..22425360,22425546..22425779

Expression

GEO Profiles:Os10g0558200

Genome Context

<gbrowseImage1> name=NC_008403:22424203..22425779 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22424203..22425779 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctctacaggtgccaaatgtgcaggaactcgcactgacttgcaaccgacctgaccagcagatacctgacaggtacatcaggccggaggctggcaccgaagaggtcatctgcggccaaggcatcaacacggcaatcccggtcatcgatctcgccaagctgctcaacccgcagtcatcccaagaggagtgtgccaagctgcgatctgcatgtcagcactggggtttcttccagctcgtcaaccatggggtgcctgacgatgtgatcagcgacgtgaggagagacttaactgagttcttcaagctaccacttgaagccaaggaggcgtacgctaaaccaccagacaagtacgaaggctatggccagcacttcgtcgtttcagagaagcagaagctggactggggagacctgctacacctccggcttcgcccaaccgagtccagggatttgaggttctggcctgcccatccttcatctttcaggaattccatggagaggtactccttggagacggcaaaagtagcacgctgcctgttggagttcttggccatggacatgggcgttgatccggagtctctcctggaggtattcagaggccagccccagaacatgagggtgaactactacccgccgtgcaggcaaaccggcaaggtgctcggcctgtcgccgcactgcgacgcgaccagcctgacgctgctgctccatgtgaacgacatgcagggcctccagatcaggaaggacggcaagtggctcaccatcgaagccctcgacggcgcgttcgtcgtcaacgtcggcgacatgcttgagattctgagcaatgggaggtacaggagcgttgagcacagggccgtggtgcacccggagaaggagcgcatctcggcggcggtgttccaccaggcgtgccgggacgcgacggtcgggcctctgccggagctcgtgacgaaggacggtggcaggccggtgtacaagtcgatggcctacgaggatttcatgaagcgcttcttctcggccaaacttgacggaagggctaacgtcgagggcatgaagatttag</cdnaseq>

Protein Sequence

<aaseq>MSLQVPNVQELALTCNRPDQQIPDRYIRPEAGTEEVICGQGINT AIPVIDLAKLLNPQSSQEECAKLRSACQHWGFFQLVNHGVPDDVISDVRRDLTEFFKL PLEAKEAYAKPPDKYEGYGQHFVVSEKQKLDWGDLLHLRLRPTESRDLRFWPAHPSSF RNSMERYSLETAKVARCLLEFLAMDMGVDPESLLEVFRGQPQNMRVNYYPPCRQTGKV LGLSPHCDATSLTLLLHVNDMQGLQIRKDGKWLTIEALDGAFVVNVGDMLEILSNGRY RSVEHRAVVHPEKERISAAVFHQACRDATVGPLPELVTKDGGRPVYKSMAYEDFMKRF FSAKLDGRANVEGMKI</aaseq>

Gene Sequence

<dnaseqindica>1332..1577#865..1189#420..667#1..234#atgtctctacaggtgccaaatgtgcaggaactcgcactgacttgcaaccgacctgaccagcagatacctgacaggtacatcaggccggaggctggcaccgaagaggtcatctgcggccaaggcatcaacacggcaatcccggtcatcgatctcgccaagctgctcaacccgcagtcatcccaagaggagtgtgccaagctgcgatctgcatgtcagcactggggtttcttccaggtacgtcaagattatgtaatcaagcttttactttgatgattcacaaggtgatacaactattattaaactgaatgatcaataaaccatgtgggagagaattaaatagtgttttttttcaaatttggacaaggtgacactgatttaagtaggataaactgtgattgatctcacaaattaaactgcagctcgtcaaccatggggtgcctgacgatgtgatcagcgacgtgaggagagacttaactgagttcttcaagctaccacttgaagccaaggaggcgtacgctaaaccaccagacaagtacgaaggctatggccagcacttcgtcgtttcagagaagcagaagctggactggggagacctgctacacctccggcttcgcccaaccgagtccagggatttgaggttctggcctgcccatccttcatctttcaggtctgcctcacaaacaaaaccacaactaatctttgcattgatcatgactatgggaaataagtagttttgagaaatttcaaccaagaaatgaacaattttttttatttccaaggtttagtttttcagtctgaacgttcatggcttctcttgttccaatgagccattttgctgcatatcacaacacaaatgtttgacaggaattccatggagaggtactccttggagacggcaaaagtagcacgctgcctgttggagttcttggccatggacatgggcgttgatccggagtctctcctggaggtattcagaggccagccccagaacatgagggtgaactactacccgccgtgcaggcaaaccggcaaggtgctcggcctgtcgccgcactgcgacgcgaccagcctgacgctgctgctccatgtgaacgacatgcagggcctccagatcaggaaggacggcaagtggctcaccatcgaagccctcgacggcgcgttcgtcgtcaacgtcggcgacatgcttgaggtaaaatattgaccaggctttcacctgatgcgtcgatctgaaaccgaaacagtttttctttgctgatcgatgttgaattgctggtgcacaccagtacagagtttctagcttaatcatctaccaacatggctgctgcttgcagattctgagcaatgggaggtacaggagcgttgagcacagggccgtggtgcacccggagaaggagcgcatctcggcggcggtgttccaccaggcgtgccgggacgcgacggtcgggcctctgccggagctcgtgacgaaggacggtggcaggccggtgtacaagtcgatggcctacgaggatttcatgaagcgcttcttctcggccaaacttgacggaagggctaacgtcgagggcatgaagatttag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0558200, RefSeq:Os10g0558200