Os10g0559500

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Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0559500| Description = 2OG-Fe(II) oxygenase domain containing protein| Version = NM_001071903.1 GI:115483401 GeneID:4349369| Length = 2130 ...")
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Gene Name

Os10g0559500

Description

2OG-Fe(II) oxygenase domain containing protein

Version

NM_001071903.1 GI:115483401 GeneID:4349369

Length

2130 bp

Definition

Oryza sativa Japonica Group Os10g0559500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22476087..22478216

Sequence Coding Region

22476389..22476634,22476879..22477206,22477745..22477992,22478125..22478214

Expression

GEO Profiles:Os10g0559500

Genome Context

<gbrowseImage1> name=NC_008403:22476087..22478216 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22476087..22478216 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atagatatgtcaaggttgatcaatcctgagttctccgaggaggagattgccaagctcggatcagcctgtgaggattggggattcttccagcttgtgaaccatggggtggatggggagttgctgcaacggatcaaggatgacatcacagagttcttcagacttcctctgcaggagaagatgtccgtggcgatcccacccaatggcttgcaggggttcggtcaccacttcgtcttctccaaggagcagaagctggactgggtcgatttgctcttcctcaccacacgcccagtggaggacaggaccacagagttctggcctacaaagcctcccacattcagggactcacttgacaagtactcgctggagattgcaaatgtgtctgctaagctgttcaagttcatggccatcaacctgggcgtcgacgaggaggcactccttgcagcattcaagccagagcaacctcagagtgtaaggatcaaccattacccaccctgcagtcaggctaacaaggtgctgggcctctcgccgcacacggatggcgtcggcatgacactgctcctccaagtgaacgacgtgcaagggctccagatcaggaaggacggcaggtggttcgccgtgaagaacctccctggagccctcgtcgtcaatgtcggcgacgttcttgagatcctcaccaatggcaagtacaagagtattgagcacagagcagtaataaaccctgataaggaaaggatcacacttgctgcattccagagcgttccgctttccagcacagttggcccactccaggagcttctgatgaaaggtgaggcacgctacaagacggttgatggtgctgagttcaccaaaggctactttgccgcgaagctggaaggcaggagatacctggagagcttgaagctgggagtgtga</cdnaseq>

Protein Sequence

<aaseq>IDMSRLINPEFSEEEIAKLGSACEDWGFFQLVNHGVDGELLQRI KDDITEFFRLPLQEKMSVAIPPNGLQGFGHHFVFSKEQKLDWVDLLFLTTRPVEDRTT EFWPTKPPTFRDSLDKYSLEIANVSAKLFKFMAINLGVDEEALLAAFKPEQPQSVRIN HYPPCSQANKVLGLSPHTDGVGMTLLLQVNDVQGLQIRKDGRWFAVKNLPGALVVNVG DVLEILTNGKYKSIEHRAVINPDKERITLAAFQSVPLSSTVGPLQELLMKGEARYKTV DGAEFTKGYFAAKLEGRRYLESLKLGV</aaseq>

Gene Sequence

<dnaseqindica>1583..1828#1011..1338#225..472#3..92#taatagatatgtcaaggttgatcaatcctgagttctccgaggaggagattgccaagctcggatcagcctgtgaggattggggattcttccaggtttgagttcttatgcctcggttttaaaagtaaagagacgctgattgttttactctgcaacattgtagacttttcacatcaagtagactgcagcaacagctagtaatcttcagaaatgtgcaatacttgcagcttgtgaaccatggggtggatggggagttgctgcaacggatcaaggatgacatcacagagttcttcagacttcctctgcaggagaagatgtccgtggcgatcccacccaatggcttgcaggggttcggtcaccacttcgtcttctccaaggagcagaagctggactgggtcgatttgctcttcctcaccacacgcccagtggaggacaggaccacagagttctggcctacaaagcctcccacattcaggtgaatatatgctttgttttaccagttcacttctgtcatgtgatgtcagactccacaacataattttatctgtcaaaacagaatttcatcagaaagtatatatgcactaggatcgggaaactggaaattgctgaactaagcatgagtgatcagctagaagaaatctatttaactagcatggtggcccacacagattgtaaattgtatttctatatggctagaggaatacaatttagaaatagttgactagagttccaataaggagtacaatattccttatatggctagaggaatacaatacagaactaaggagttccgatattccttatataaggaatacaatttccaatatagaaatacaatttagaactatagtcaactatttctaaattgtatttctatatggactctatttttctttttctccgattaatatgagaatttttagaccgtgagagcgaacgtggaggctcctttttctattcccttaataagttaatggatttcctttttcaccgctgaaatttggtcattacagggactcacttgacaagtactcgctggagattgcaaatgtgtctgctaagctgttcaagttcatggccatcaacctgggcgtcgacgaggaggcactccttgcagcattcaagccagagcaacctcagagtgtaaggatcaaccattacccaccctgcagtcaggctaacaaggtgctgggcctctcgccgcacacggatggcgtcggcatgacactgctcctccaagtgaacgacgtgcaagggctccagatcaggaaggacggcaggtggttcgccgtgaagaacctccctggagccctcgtcgtcaatgtcggcgacgttcttgaggtgaatgcaccttccttggcaatgcttttcatgaccgccaaaagctgtgttgtgttgtcatgcatcatgccattattgataggaagaaaagaacagctgactgaaattcttgagaaaatttcctaagaactataataaataggagtatgtagcaacctttttttctgaacaaaaagagtgggtgacacttgatcatcttttcagctatttgtctatatattaaagttgttttctttctcaacagatcctcaccaatggcaagtacaagagtattgagcacagagcagtaataaaccctgataaggaaaggatcacacttgctgcattccagagcgttccgctttccagcacagttggcccactccaggagcttctgatgaaaggtgaggcacgctacaagacggttgatggtgctgagttcaccaaaggctactttgccgcgaagctggaaggcaggagatacctggagagcttgaagctgggagtgtgaatgtgtcaggatgagtagtttttgcttctctttgattcttttgtttcggtgaatggataacgatgctacatcttcctcatcctggtacaattcagctggtattttccttgaccatacactcaactggagtattagtgcccatgagctaacggcacagagaacaatggaacatatggtagaactggctggcaggtatgatgtccgagattgcgtacaacacgcagttccttgggatccatttcatatgccagtaaagtattgtccaatccataatgaaagaagatcaaattgcactctggatg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0559500, RefSeq:Os10g0559500