Os10g0559700

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Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0559700| Description = Conserved hypothetical protein| Version = NM_001071905.1 GI:115483405 GeneID:4349371| Length = 5616 bp| Definition ...")
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Gene Name

Os10g0559700

Description

Conserved hypothetical protein

Version

NM_001071905.1 GI:115483405 GeneID:4349371

Length

5616 bp

Definition

Oryza sativa Japonica Group Os10g0559700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22485911..22491526

Sequence Coding Region

22485911..22486439,22486516..22486626,22486711..22486763,22486843..22486918,22487002..22487221
,22487332..22487756,22488048..22488227,22488358..22490329

Expression

GEO Profiles:Os10g0559700

Genome Context

<gbrowseImage1> name=NC_008403:22485911..22491526 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22485911..22491526 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattatgatgattctgattttcagagccagaatttccagttagctggtgaagacaacaataaattcccagcaggtctgcggcaatttccactgcccaaacttgacatcgacgaccaactacaaagccacctcagatttgataacctaattgattcagagggactttttagcggacaaggtcacggcaacagttggattgaggttttgtccactggaagtagtgttgttgattttagttctagtgctgctgaatcttgctctataaataggacaaataatgtatggtctgaggcaacatccactgaatctgtggaaatgttattgaagtcagtgggtgaaaatgagatgaccggtaacatggatgagaacgcacatcatcagattagtggaatggacagtaaaactgatccatccaacatgccgtccaaaacaagtgattctcccacaggcaacattatagtaccagctgagaatgataagtctcagagcactcgttcggaaatggcagaagatccttcaaggattcagcctcagcttgagcatatcagacctttctcagtggatgacaaagctgaacaagcagtaggttcaactttatcagacagaaaatctaactatacgctggaatctgtttctgagaggtgcatagtgagtgggaggtcttcttctccaaagaaaacatcagaaagctgtccagatgttggcagctattttgaggtggtccatgatgacgattctttggacaacctcaacatacagtcagatggagtaggttctagaaagttgaataatgaacccttctcagacttggcaccattacagaacatttatactaccagctcatatcactttgagcaggacaatcaagaatcaggagttggtgttaccactcaaggttcagaaatatgccacacgaatgaaaataaagatggacttcatgatttgcaaaatttgtcatgtacaagccagcatttgggttcttcaaacttaactagtgaagttagcaatgaaactttattgtcgggaagttctgatggattactggaggccatcacaaatccagtaaagatgctgcacaggagtgatgacactagtaagagagccagtgctacactgcaatcatctttcttacaagtcgagcatgcatcagaaggcacaaaaggttctattgacaggagcagtgagcccgccatgaagaaatttggtgctagtgaagaacccaattctgctaaatctcaaggtgagccagatttgaaaaattctagtcctcatcttgtcattcctttgccaaccataagtggtgagtttattcagtctccaaaaggaaaacagcttgctcatgttgctggagtttctgaagaaaccaaatatgacagggtggatgatacgaaccatagcactagtgatgactcaaaacttgccatgttggagcagcttcaagattctgttgataatctatctagtggtgttatggaagagaagacaatcagagggcaaatctcagctgtttcagggaacgttgtacatgtagtgaaaagtggtcattgtgaaaaagttgcagtttctaccagtacaacagatgataagtttgagtcaccgggtgatattgtgcctgacaattcttcagcttgtttacctgatgaaaaagacccaagcatcacagttaaccacgaggtgtcattcaaggaaggtgttgtgcctgcattagaagacgatcctgagaaaatgtcctcaatgaatcatgaggagccattgaaggaagatgataaatctactttagaagttggagaacacaataccacatctcctgtttctgagcccttgctgatgggatcaacaggatcagtgaatccgaacattgatactatttgtagcagtggtactgatgctgttgcagaaacaccacaatgcgaagaacaggccacttcttcgggtagtttgaccacaaatgcaactcaggataaactaggtgatcatccagacgcttgtccaccgaaagtcttgactactgggcctttgatgcaacctgaggatcatgaagatttagttgcaccatcctctgtcttgggtgcctcgtctgaaaagggtgaacaaaataacggaaaagttcccttgaatgggatggatgattcgggtgtgcagttacaagataaggtattaagtcatggtggagatcgtactcttgttactgtttcatcagagaataagaatggcttagaacatgggactggtgaaggaagctgcactgatgctacatgtggttcgcctacagtgattagttgcaatgaatcctgtccagaagaagatgggcagggcagtaatgctttgcttcatcacaaacaaaccgaaccacccaaggatcctaaagatcatacagcttcgactaacaattcccatgtctcaaaagaaggttcttccagaaatgtaaaacctactcttacttcggaggagacgcatacagccgaagataaaagtttttcatttgaggttggagctccactaaatataactgagaaagctcatgctcctgcttggagcccattgcctcgacctgaagttgctcagagtcccgaggtaaccactggaattcctaaacctggaaatccatcgaatcatggtagtgatgaaagtaagaatttggcgattgtggagaccagcaaagaacaactatctggaaggaaagtggttggaagtgctgaggggtcttctgtaagctcacatattggtcatatcactaaagccaaaagtacaccactagagcaggaacaacaacatccaactcctgatgtcaatgctttggggcaccaacctttcacagatttacagcatgtgcagctacgtgcacagatatttgtttatggagctctcattcaaggaatgccaccggcagaatcttacatggtgtcagcttttggagaacctgcatgtggtcgtaagcctccatgggggacacttttgcaagctgctttggaaagatataatagtcagaggtcatctttaactggcttggagactcctacaagctcacatataggtagccgtgtgacggaaaaagccagtagaagcacagcggttaaaactgcaccagctagcaaaaagggtggcaaaactgtgttgccagcacatactgctgtgccccttcatttgccaactttaaatatgtctcctcttggtagttctgctttgagcttgccacgaggtactcatctggattttggccaggctgtatcaccagtattcccatacagttcacagacaaggcagcctacttctggtgttgcatcgtggtttccccagagccctggtgggcgcgctgccccctggttggttcaaccacagaatttgatatttgattcatcgatgaaaccgcctgtgccggcaagtgcaaatgaaactgcaaagggagcatcctctaaaaacatatccatttcacaagctgtttcacctgttgcattccctccgaatcaggcgccttctaccatttctccattagcagtcatacctgaggaaaaacagaaggcatcggtttctacttctaagcgtggagctacaccacaaaagtc</cdnaseq>

Protein Sequence

<aaseq>MDYDDSDFQSQNFQLAGEDNNKFPAGLRQFPLPKLDIDDQLQSH LRFDNLIDSEGLFSGQGHGNSWIEVLSTGSSVVDFSSSAAESCSINRTNNVWSEATST ESVEMLLKSVGENEMTGNMDENAHHQISGMDSKTDPSNMPSKTSDSPTGNIIVPAEND KSQSTRSEMAEDPSRIQPQLEHIRPFSVDDKAEQAVGSTLSDRKSNYTLESVSERCIV SGRSSSPKKTSESCPDVGSYFEVVHDDDSLDNLNIQSDGVGSRKLNNEPFSDLAPLQN IYTTSSYHFEQDNQESGVGVTTQGSEICHTNENKDGLHDLQNLSCTSQHLGSSNLTSE VSNETLLSGSSDGLLEAITNPVKMLHRSDDTSKRASATLQSSFLQVEHASEGTKGSID RSSEPAMKKFGASEEPNSAKSQGEPDLKNSSPHLVIPLPTISGEFIQSPKGKQLAHVA GVSEETKYDRVDDTNHSTSDDSKLAMLEQLQDSVDNLSSGVMEEKTIRGQISAVSGNV VHVVKSGHCEKVAVSTSTTDDKFESPGDIVPDNSSACLPDEKDPSITVNHEVSFKEGV VPALEDDPEKMSSMNHEEPLKEDDKSTLEVGEHNTTSPVSEPLLMGSTGSVNPNIDTI CSSGTDAVAETPQCEEQATSSGSLTTNATQDKLGDHPDACPPKVLTTGPLMQPEDHED LVAPSSVLGASSEKGEQNNGKVPLNGMDDSGVQLQDKVLSHGGDRTLVTVSSENKNGL EHGTGEGSCTDATCGSPTVISCNESCPEEDGQGSNALLHHKQTEPPKDPKDHTASTNN SHVSKEGSSRNVKPTLTSEETHTAEDKSFSFEVGAPLNITEKAHAPAWSPLPRPEVAQ SPEVTTGIPKPGNPSNHGSDESKNLAIVETSKEQLSGRKVVGSAEGSSVSSHIGHITK AKSTPLEQEQQHPTPDVNALGHQPFTDLQHVQLRAQIFVYGALIQGMPPAESYMVSAF GEPACGRKPPWGTLLQAALERYNSQRSSLTGLETPTSSHIGSRVTEKASRSTAVKTAP ASKKGGKTVLPAHTAVPLHLPTLNMSPLGSSALSLPRGTHLDFGQAVSPVFPYSSQTR QPTSGVASWFPQSPGGRAAPWLVQPQNLIFDSSMKPPVPASANETAKGASSKNISISQ AVSPVAFPPNQAPSTISPLAVIPEEKQKASVSTSKRGATPQKS</aaseq>

Gene Sequence

<dnaseqindica>5088..5616#4901..5011#4764..4816#4609..4684#4306..4525#3771..4195#3300..3479#1198..3169#acaccactcacgcctcctcccctctctctcagtccacccctccccatttccaccactccgccctcgccgccgaccgccgccgccgccgccttcgccgtcgtctcgcagcgcgacccacggccacgcgggggggacgcgctcgtcgtctctctctctgtcctcttgtggttcccgccgacgcacgagcaggagctagggtttccggcgccggggcgccgggggttatgagcagcagccgccgccccgcaggatctagggttccgacgactccgctcacggatggagggtggtagaggcgcgggcgacctccactcggtaacacgtcttcctcgctctctcccccctcccctcgcttccgcttttgctctctcgctgtgcgcccgtcatgcgttgcttgcttcagtggcgctgcgcttagaccggcgcgagttagggttttgcgtggggcttaaagtcgggccgctgtgtgcatggatggtttttttttgaaggtttagttggagactcgcggttggggctggaattagggttttgagctttcggagtagtatcatgctgcggcgcgccgtcagttatactaagtcaggaagttagcatgatagcctagttcattcccgtaggtttgaattgcggctttggttgtacagtgggcttgcggagcatagagtatgccttttgacttgtgccgacctggttgtataagctctgtttatgttcactaaccacagggcgctggtggtcaaactgggacatccttgatcctttttacctgaccaatagatggcattttagttggtactggatgccccatcatggtgaatcatctcatgttgaattagcatttagcacattctaagtggttactttgtgagctttaggcaagcaagtcccacacgatcatcatggtttaaatctctgccttccagcgttacttgctatagcctataatgcaatcttcatcagtaggcactctgtgttggtcgcctagagttgggaaaaatgcagtgcctggagcatttagttatccgtctgatgaatttatctttggtgttatttatatgtatggactgtggcatacgcagttcacaaatgcttagcttggtcgaaagtctccttagtccactttaattattgatgttttcttgttgttggcagttttgtctctactgaattactacaccttgcaggcaaacacccatggattatgatgattctgattttcagagccagaatttccagttagctggtgaagacaacaataaattcccagcaggtctgcggcaatttccactgcccaaacttgacatcgacgaccaactacaaagccacctcagatttgataacctaattgattcagagggactttttagcggacaaggtcacggcaacagttggattgaggttttgtccactggaagtagtgttgttgattttagttctagtgctgctgaatcttgctctataaataggacaaataatgtatggtctgaggcaacatccactgaatctgtggaaatgttattgaagtcagtgggtgaaaatgagatgaccggtaacatggatgagaacgcacatcatcagattagtggaatggacagtaaaactgatccatccaacatgccgtccaaaacaagtgattctcccacaggcaacattatagtaccagctgagaatgataagtctcagagcactcgttcggaaatggcagaagatccttcaaggattcagcctcagcttgagcatatcagacctttctcagtggatgacaaagctgaacaagcagtaggttcaactttatcagacagaaaatctaactatacgctggaatctgtttctgagaggtgcatagtgagtgggaggtcttcttctccaaagaaaacatcagaaagctgtccagatgttggcagctattttgaggtggtccatgatgacgattctttggacaacctcaacatacagtcagatggagtaggttctagaaagttgaataatgaacccttctcagacttggcaccattacagaacatttatactaccagctcatatcactttgagcaggacaatcaagaatcaggagttggtgttaccactcaaggttcagaaatatgccacacgaatgaaaataaagatggacttcatgatttgcaaaatttgtcatgtacaagccagcatttgggttcttcaaacttaactagtgaagttagcaatgaaactttattgtcgggaagttctgatggattactggaggccatcacaaatccagtaaagatgctgcacaggagtgatgacactagtaagagagccagtgctacactgcaatcatctttcttacaagtcgagcatgcatcagaaggcacaaaaggttctattgacaggagcagtgagcccgccatgaagaaatttggtgctagtgaagaacccaattctgctaaatctcaaggtgagccagatttgaaaaattctagtcctcatcttgtcattcctttgccaaccataagtggtgagtttattcagtctccaaaaggaaaacagcttgctcatgttgctggagtttctgaagaaaccaaatatgacagggtggatgatacgaaccatagcactagtgatgactcaaaacttgccatgttggagcagcttcaagattctgttgataatctatctagtggtgttatggaagagaagacaatcagagggcaaatctcagctgtttcagggaacgttgtacatgtagtgaaaagtggtcattgtgaaaaagttgcagtttctaccagtacaacagatgataagtttgagtcaccgggtgatattgtgcctgacaattcttcagcttgtttacctgatgaaaaagacccaagcatcacagttaaccacgaggtgtcattcaaggaaggtgttgtgcctgcattagaagacgatcctgagaaaatgtcctcaatgaatcatgaggagccattgaaggaagatgataaatctactttagaagttggagaacacaataccacatctcctgtttctgagcccttgctgatgggatcaacaggatcagtgaatccgaacattgatactatttgtagcagtggtactgatgctgttgcagaaacaccacaatgcgaagaacaggccacttcttcgggtagtttgaccacaaatgcaactcaggataaactaggtgaattatgctatatttccttttatcatatcagtcctgttggcgtatttttgagatgtatgcattactaacatgcattccattaatgtggagtttgtctttaaaactgacgatgcttggattcattcaggtgatcatccagacgcttgtccaccgaaagtcttgactactgggcctttgatgcaacctgaggatcatgaagatttagttgcaccatcctctgtcttgggtgcctcgtctgaaaagggtgaacaaaataacggaaaagttcccttgaatgggatggatgattcgggtgtgcagttacaaggtcagttgcttgtggcctctaatgccattttcctctaaaagagctgttcactactattctttttaggaaatagaacttttctataaagcaaacatttgatagtaatagttcatctgttcttttttatttgatcttttagacttttaagtgcttttctatgcacttctaccagtatcattctgtgcactgaaccatattcacatttctattccaagtaaacgtgttaagtatgctaacataagtagtggagtaattcaagtggatccaaagtgatacgttctttttctacagataaggtattaagtcatggtggagatcgtactcttgttactgtttcatcagagaataagaatggcttagaacatgggactggtgaaggaagctgcactgatgctacatgtggttcgcctacagtgattagttgcaatgaatcctgtccagaagaagatgggcagggcagtaatgctttgcttcatcacaaacaaaccgaaccacccaaggatcctaaagatcatacagcttcgactaacaattcccatgtctcaaaagaaggttcttccagaaatgtaaaacctactcttacttcggaggagacgcatacagccgaagataaaagtttttcatttgaggttggagctccactaaatataactgagaaagctcatgctcctgcttggagcccattgcctcgacctgaagttgctcagagtcccgaggtttctttcttgccttcttttgatgtatttgaaactaataaattcatcgatttttcatagattaagtagctgagacttattaacatggtctattatgctctaaattttaggtaaccactggaattcctaaacctggaaatccatcgaatcatggtagtgatgaaagtaagaatttggcgattgtggagaccagcaaagaacaactatctggaaggaaagtggttggaagtgctgaggggtcttctgtaagctcacatattggtcatatcactaaagccaaaagtacaccactagagcaggaacaacaacatccaactcctgatgtcaatggtgcgtaaagtcgtaaatctcttgtgtacaagtggtctaagtatataaattacctgacctgactacttcagtttcttctgcagctttggggcaccaacctttcacagatttacagcatgtgcagctacgtgcacagatatttgtttatggagctctcatgtaaactctaaactctcttaaatttgagttggttatatatgcaaatgtgttgattagcgaaaactatttcttttggcagtcaaggaatgccaccggcagaatcttacatggtgtcagcttttggagaacctggtttgtttggttccattgcaaagtttcaaagtgataattttttatctctatcctatattctcatttatttgtattactgaacagcatgtggtcgtaagcctccatgggggacacttttgcaagctgctttggaaagatataatagtcagaggtcatctttaactggcttggagactcctacaagctcacatataggtaaatattgtgtgattatgtcatagtattctatgtattgcacaatattctgttttctaagtaaagatgtctgcaggtagccgtgtgacggaaaaagccagtagaagcacagcggttaaaactgcaccagctagcaaaaagggtggcaaaactgtgttgccagcacatactgctgtgccccttcatttgccaactttaaatatgtctcctcttggtagttctgctttgagcttgccacgaggtactcatctggattttggccaggctgtatcaccagtattcccatacagttcacagacaaggcagcctacttctggtgttgcatcgtggtttccccagagccctggtgggcgcgctgccccctggttggttcaaccacagaatttgatatttgattcatcgatgaaaccgcctgtgccggcaagtgcaaatgaaactgcaaagggagcatcctctaaaaacatatccatttcacaagctgtttcacctgttgcattccctccgaatcaggcgccttctaccatttctccattagcagtcatacctgaggaaaaacagaaggcatcggtttctacttctaagcgtggagctacaccacaaaagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0559700, RefSeq:Os10g0559700