Os10g0561100

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Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0561100| Description = Similar to Quinone oxidoreductase| Version = NM_001071915.1 GI:115483425 GeneID:4349382| Length = 3086 bp| Definiti...")
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Gene Name

Os10g0561100

Description

Similar to Quinone oxidoreductase

Version

NM_001071915.1 GI:115483425 GeneID:4349382

Length

3086 bp

Definition

Oryza sativa Japonica Group Os10g0561100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22572412..22575497

Sequence Coding Region

22572946..22572990,22573108..22573246,22574061..22574287,22574433..22574690,22574869..22575195

Expression

GEO Profiles:Os10g0561100

Genome Context

<gbrowseImage1> name=NC_008403:22572412..22575497 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22572412..22575497 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggtgaaggcaattagagtccacaagattggtggtccagaggtgctaacttgggaagaggtggagattggggagcccagcgagggggagatccggatcaagaacaaggctatcggtgtcaactatgtcgatatttattaccgtactgggttgcatcaagaacctctcccgtttgttcctggcaaggaagcagtaggagtagtgtctgctgttggacctggggtaacaggtatcgaagttggcgatgtagtcggctatgctgatactccaatgggcacttacactgaagaacagattataccggcaacactggccattcctattccaccttcagtggaccacattactgcagcatctgttttactcaagggaatgactacatatgtccttgtgaaacaagcctttaagattcaggcaggccatactgtcctagtccatgctgctgcaggaggagttggctctctcctttgtcagtgggcgaatgcccttggtgccaccgttatcgggaccgtttcgacacaagagaaagcaatccaagcagccgaagacgggtgccatcatgtgatcatctacaccgaggaggatttcgtagcccaagttgctgaaatcacatcgaggaagggtgttcatgttgtttatgatgctgtcggtaaagacaccttcaagggatcaatggagtgtctgatgccgcgtggatgcatgatctcttatgggcaatgttcagggaggcctgaccctgtaccagtgagtgatctggcgtccaagtccctgatcttgggcaggccagggatgaggcactacaccgccacccgcgacgagctgctgcacgccgccggcgaggtcttcgccggcgtggcggctggcgttctgcgcgtccgcgtcaaccatgtctacccgctgcatgaggcggctcgcgcgcacgcggatctcgaggcacggagaacctctggatctgtggtgttgttgcctgccatgccagcagctgacagctga</cdnaseq>

Protein Sequence

<aaseq>MKVKAIRVHKIGGPEVLTWEEVEIGEPSEGEIRIKNKAIGVNYV DIYYRTGLHQEPLPFVPGKEAVGVVSAVGPGVTGIEVGDVVGYADTPMGTYTEEQIIP ATLAIPIPPSVDHITAASVLLKGMTTYVLVKQAFKIQAGHTVLVHAAAGGVGSLLCQW ANALGATVIGTVSTQEKAIQAAEDGCHHVIIYTEEDFVAQVAEITSRKGVHVVYDAVG KDTFKGSMECLMPRGCMISYGQCSGRPDPVPVSDLASKSLILGRPGMRHYTATRDELL HAAGEVFAGVAAGVLRVRVNHVYPLHEAARAHADLEARRTSGSVVLLPAMPAADS</aaseq>

Gene Sequence

<dnaseqindica>535..579#697..835#1650..1876#2022..2279#2458..2784#gtgggtgggagagctcgagctccgaagatggcaacaatggcggccggcgtcgcactgcacctgcacctacaaggtgacgcggccggccgccggataagcggcgaagctgcccaagttcttctccttgggctgcttctgcttctactggtgagttcagagttcagactccaacttgggtcagatctcgtttccatgactcccatgtacccatgtattctgaatttctgatcctagctcaaaattgtttttttctctttttgtcatttcctgttttgatgaaacatgcgcatcattcaagtattataaatttataattggtgccagccgcaaatttgcggaggttggtacgaataggattgtttttttgtcctcatgtatttgtacttttgtagtcctgttgaatccactagagactgctgcttattgctgaactgccacatattgctgctaggaactcacaaattttcaggagttctactcgataaacttatcagcacattgcacatccagctttgcctctgagtgcttccagggatgaaggtgaaggcaattagagtccacaagattggtggtccagaggtaagtgtgtgttctataccaagaagaaaactccatctaatttccttttccttataattcatctcctgcaaatctaatccatttgggagtaagcagttcttcttctgatgtccaaaggtgctaacttgggaagaggtggagattggggagcccagcgagggggagatccggatcaagaacaaggctatcggtgtcaactatgtcgatatttattaccgtactgggttgcatcaagaacctctcccgtttgttcctggtacggattttagtattttaccatcatcaatgacagtgatgtgctgaatgttttcagatctggtgtatggggattctgataacaaaattccaacttactttgttaaatctaatgtcagttcatggcccggagaaaattcttggttgccatctgagcttatagagtatactggtaggctaaggaaaaattataggacatgttcatattgtagccaaaataaaccttaccaaaccaaaattttggcaatttggcaatattgtcaagttttggcaggatttcttatttatttaccagagtttggtaagaaactaaatggatgcgcatatttgacaactttaccaaaaaaaatagtatggtttaaaatggcatcaatctgaacaagcccttactctagcacttttcagtcttctatcactgttcactaactaggcaagtgagcagtgatataggacttttgaaccttgtaatttctatgtaggatttctcaaatcactacagccaatcaccatttgcatacgaagaatcagactcagtgttatgcttgaagagtcttcccctgaataaagttctttggtgttttttgtactagccaagcaccgaattatcacaagaagtgcagtttgtgacttctagaaaaattgaaaacacacaaaagaaactgtttaactaatgagtattcaatcgaatttatcagaaattatttaatggtatgccgaaaaggcaagatcgcactatccatttgcaaatgaacagtcaaacttgtcgaaaatgtgaatgatcttattcttggagcattgactttgtgttcatccaggcaaggaagcagtaggagtagtgtctgctgttggacctggggtaacaggtatcgaagttggcgatgtagtcggctatgctgatactccaatgggcacttacactgaagaacagattataccggcaacactggccattcctattccaccttcagtggaccacattactgcagcatctgttttactcaagggaatgactacatatgtccttgtgaaacaagcctttaaggtgattgttttgtgctaagctgattcagtagttcagtaccaacttccatgatttcagagacacaaaacaaaagaaaacaaaacagaaactgattttgatttcagaatgcaacttagaaacacctccatgttggtctcttgtgcagattcaggcaggccatactgtcctagtccatgctgctgcaggaggagttggctctctcctttgtcagtgggcgaatgcccttggtgccaccgttatcgggaccgtttcgacacaagagaaagcaatccaagcagccgaagacgggtgccatcatgtgatcatctacaccgaggaggatttcgtagcccaagttgctgaaatcacatcgaggaagggtgttcatgttgtttatgatgctgtcggtaaagacaccttcaaggtagcaaaaccatcctactctcattttgcaacaccttacaatcactttcaccttctttgatcttgacaaaaagcattgccatgaaaattggaattaaatgttgaatcataggcttgacatgaggtaaatcagctgcctgaaactgaatatttttttgtctgaaactctgaatgtgaagggatcaatggagtgtctgatgccgcgtggatgcatgatctcttatgggcaatgttcagggaggcctgaccctgtaccagtgagtgatctggcgtccaagtccctgatcttgggcaggccagggatgaggcactacaccgccacccgcgacgagctgctgcacgccgccggcgaggtcttcgccggcgtggcggctggcgttctgcgcgtccgcgtcaaccatgtctacccgctgcatgaggcggctcgcgcgcacgcggatctcgaggcacggagaacctctggatctgtggtgttgttgcctgccatgccagcagctgacagctgatgagagtatcctgtggcattgatgttgttagaataggtgtcgaatatactagttctatttggttacagttggacttggaattgtaataggtgttagggggtggagttagagtcaaactctgtaacccggcatctctcttaaatagagcggggggcaccacaatgtaaccatggcgactacaatgtagcgtagacacgcagggagatgatggcggcgtggccatggactcgtagcggctaggagctatattggttggggaggagcgcccataatcagagccccggggatgtaggtttcggctg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0561100, RefSeq:Os10g0561100