Os10g0576900

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Revision as of 08:49, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0576900| Description = NAD-dependent epimerase/dehydratase family protein| Version = NM_001072019.1 GI:115483633 GeneID:4349494| Length = 4...")
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Gene Name

Os10g0576900

Description

NAD-dependent epimerase/dehydratase family protein

Version

NM_001072019.1 GI:115483633 GeneID:4349494

Length

4512 bp

Definition

Oryza sativa Japonica Group Os10g0576900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:23436955..23441466

Sequence Coding Region

23437052..23437357,23437966..23438173,23440688..23441036,23441150..23441246

Expression

GEO Profiles:Os10g0576900

Genome Context

<gbrowseImage1> name=NC_008403:23436955..23441466 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:23436955..23441466 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggatgagggagagcaacgaggaggagaagaagagcgtgtgcgtgatggacgcgtccggcccgctcggccacgccctcgtcgcccgtctcctccgccgaggctacaccgtccacgccgccacctacccccaccaccaccaccatccagaagaagagtaccagcagcacccccgcctgaagctgttccgcgccgaccccttggactaccacgccatcgccgacgccgtccatggctgctccggcctcttcgccatcttcaacaccccttcctcctcgcaatcgcaatcgcactcctgcttcctagatgaggaggagggtatggtggaggcggaggtgcgagcggcgcacaacattctggaggcgtgcgcgcagacggacaccatggagagggtggtcttcaactcctccgtcaccgccgtcgtgtggaggcctcagccggaggaggacgatgacgctgccttgcaattggacgagaacacctggagcgacctcaccttctgcagaagattcaagctgtggcacgctctggccaagacgctatcggagaggacggcgtgggccctggcaatggacagaggagtagacatggtggccatcaacgccggcctgctcaccggccccggcctcaccgccggccacccttacctcaagggtgcacccgacatgtacgaccacggcgtcctcgtcaccgtcgacgtcgacttcctcgccgacgcccacatcgccgcctacgagtgccccaccgcctacggacgctacctctgcttcaacaacgccatctgccgcccggaggacgccgccaagctcgcccagatgctcatctcctccgccgccgcgccgcgaccccctgcgccgccgagtgatgagctcaaggtgatcccacagaggatccacacaaagaagctcaacaaactcatgctggacttcaccagtggcgtatacggggacataaattaa</cdnaseq>

Protein Sequence

<aaseq>MRMRESNEEEKKSVCVMDASGPLGHALVARLLRRGYTVHAATYP HHHHHPEEEYQQHPRLKLFRADPLDYHAIADAVHGCSGLFAIFNTPSSSQSQSHSCFL DEEEGMVEAEVRAAHNILEACAQTDTMERVVFNSSVTAVVWRPQPEEDDDAALQLDEN TWSDLTFCRRFKLWHALAKTLSERTAWALAMDRGVDMVAINAGLLTGPGLTAGHPYLK GAPDMYDHGVLVTVDVDFLADAHIAAYECPTAYGRYLCFNNAICRPEDAAKLAQMLIS SAAAPRPPAPPSDELKVIPQRIHTKKLNKLMLDFTSGVYGDIN</aaseq>

Gene Sequence

<dnaseqindica>98..403#1012..1219#3734..4082#4196..4292#agtgcaataggccgctttatcatcatctatctcttcttccagttccagctctctctctctcgtcttattgttggtcgttgacaagttttggttgggcatgaggatgagggagagcaacgaggaggagaagaagagcgtgtgcgtgatggacgcgtccggcccgctcggccacgccctcgtcgcccgtctcctccgccgaggctacaccgtccacgccgccacctacccccaccaccaccaccatccagaagaagagtaccagcagcacccccgcctgaagctgttccgcgccgaccccttggactaccacgccatcgccgacgccgtccatggctgctccggcctcttcgccatcttcaacaccccttcctcctcgcaatcgcaatcgcactcctgcttcctagtacgtctttctctctctcctcctgttcgatcgatttagctctacatacaaaatcatgcatcaaaccaagccttttcattttttttacttacttgtgcatatgtacatacatacataaatctgaggatgatgatactacgcaatccttaacaactcaaggtcaaggatagtactactagtagatgcatgatactggaagagagcatggctaggttggcaccgatcgagccggccattaatttggcatgtcaagtacagtagagatgagatggtgctgagctgggtctgctgccctttcattaatgggcaatggcgcgcctcatatcatcatcatcatcatcatctatctagctccttcttcctccttccagttccacagttctagtttcagctagctggctccgagaagaggatgaccgatgacactaataactgcacctaccaaccagcctttccgcgtcaatcaattaatgcccctgccctgctttgcatgtacacactgctcctccggcgaactaccggccggagtaggagcatgagaatgacttggcttgattatgtattatgttaatcctaactgattgaatttaccaaaaaaaaaaaaacaggatgaggaggagggtatggtggaggcggaggtgcgagcggcgcacaacattctggaggcgtgcgcgcagacggacaccatggagagggtggtcttcaactcctccgtcaccgccgtcgtgtggaggcctcagccggaggaggacgatgacgctgccttgcaattggacgagaacacctggagcgacctcaccttctgcagaagattcaaggcacgtgtgctcccttttcctcctccatcttcctttctttttattttcaattattaataatactctactgtactagtagtacttttctttattagtattactgtattattattccactcaaaatctgcaattcacttgattcgcatcatgccgatccttttattattatattctatcatatatgcgtgtcgtcactgatcgattcgatcaactagtggcacagcagtacaccgctcattgataacgcaatggcaaattagtaatattggtacggcagtagcgctggtccaagtagctgaacaaactagttattgcatgcaccacccaacaacaacaaatgttaccgagtactacactatactcataaaaaaaatcgtttagaacaaaatttaagtcaaaccttacaaatataaatcatgaataactctcagtttgttgaggttgaaaatataaaaattatatgaatagatttgtcttgaaaaatactttcatcaaagtatacatatatcactttcaataaatatttttatagaaataagaagtcaaagttgtgttttggagaccatgtcgctgtcaaaaacgattttcctttacaagtacggaggttactctactcatcaatatactccctccgtcccataatataagaaattttgagtttttgtttgcactctctgatcactcgtcttattcaaaaaaaatttggaattattatttatttttttgtgacttactttattatccaaagtattttaagcacaacttttcgttttttatatttgcacaattttttttgaataagacaagtggtcaaataatacaagtaaaaacttaaaattccttatatcatgggacagagggagtactacactactccctccgtcccaaaataagtgcagttttacactattcacgtttaacgtttgaccgttcgtcttatttgaaaattttatatgattagtatttttattgctattagatgataaaacatgactagtactttatgtgtgactaaatatttttaaatttttcataaatttttcaaataagacggacggtcaaatgttgggcacggattttagaacggagatagtacatacttgtactataccatatggccggtcaattctactcagctcaaccatatatggcctggctgggtggctggcggccggtacctttcgccatcaccagagccactagtacatgagtgactacaccttaatatttaatcacttcccttttcgccaccaatcctcctagtgcttgtattagtagtacaaaagtgtgcaagcaattcaatttcgctcacacaaagatcaccgatataaatagggtcatcttaaacatcaaggctttccctcttaccaacctccctccctctttgtatcgcaaacactaatagcaaagcctatctagaagcaagcatgcaaagcagcaggttcaacaacaaaccaaaccaaaccaaacccttgagagtaaaagcaacaacaagctgctactactagctagtgtgggtggcttctgaatatgtcaactcttgcttcgcctgataagtggagtacaatccaggtgtccaagagaagaattggcaagtcttgaccgcaacaaaaggtcctctttcattcccaaaccagctgagagtgtgtggctgcgccaagaagaagaagagaagaggatggacacgcatacgcatacgcatgcacgtcgaatgaatgagtgcgactcttgagctgttgggattaggacacctacggaaaacgatcacacgtatcccagcccaccctttttctgcttctcttcattattataatcacctactcctttgtttactagatacgatattcctacataaaaaaagagataatccattgtatgccactgagtttgtcataggtctacaatttgccactgactttgtcacgttctataatatgccatcgatttttgcttaacttctacgatttaccaccgccatccggttagtctccgttagtactgtacactttcatccaaatgaccaaaatacccctgagacaaaaactttcaaattttggataaaaaatctgaaatgtcagactttaagtttttggacaaattttgaatgtttacaatcttatgtttataatatggtatttcagaatttttgtccacattttggaagttttatcccaggggtattttggtcatttggacaaaattgtacagtactaacggagactaactggacggcaatggtaaatcatagaagttaagtaaaagtcgatggtatattatagaacgtgacaaagtcagtggcaaatcgtagagctatgacaaactcagtggcatataatggattgtctcttaaaaaaaaagaggtagtatcagactcctttaataatttacttgttcattggatcatgaaattgacagccatccaagtagcggattatagcttattgatgaattgtgttaggaagaagaagaattgcacagtgagtgagagtgacattgtgtttaaatcaattgcagctgtggcacgctctggccaagacgctatcggagaggacggcgtgggccctggcaatggacagaggagtagacatggtggccatcaacgccggcctgctcaccggccccggcctcaccgccggccacccttacctcaagggtgcacccgacatgtacgaccacggcgtcctcgtcaccgtcgacgtcgacttcctcgccgacgcccacatcgccgcctacgagtgccccaccgcctacggacgctacctctgcttcaacaacgccatctgccgcccggaggacgccgccaagctcgcccagatgctcatctcctccgccgccgcgccgcgaccccctgcgccgccgaggttccttcatcgtcttcctcttcttcgtcatttagattagattaattaattaattaatatgaattagtatcaattgattaatatggacctttttatttgtttgcaaattgcagtgatgagctcaaggtgatcccacagaggatccacacaaagaagctcaacaaactcatgctggacttcaccagtggcgtatacggggacataaattaaattaaactaggggatttgccttcctttattttatatatcacacgtgcaactagacatgtactactcctcttgtatcttcttctatttcttttattctttctcctctaaagggagggaaatttggtttggtcaaatgtacatgttgtacatggccaagctgccacatgtattccattcttacagagggtaagatcatttcaatgattacttatataccaac</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0576900, RefSeq:Os10g0576900