Os10g0578200

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Revision as of 08:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0578200| Description = Similar to CSLD2 (Fragment)| Version = NM_001072030.1 GI:115483655 GeneID:4349505| Length = 1231 bp| Definition = O...")
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Gene Name

Os10g0578200

Description

Similar to CSLD2 (Fragment)

Version

NM_001072030.1 GI:115483655 GeneID:4349505

Length

1231 bp

Definition

Oryza sativa Japonica Group Os10g0578200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:23520337..23521567

Sequence Coding Region

23520339..23520404,23520492..23521199

Expression

GEO Profiles:Os10g0578200

Genome Context

<gbrowseImage1> name=NC_008403:23520337..23521567 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:23520337..23521567 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gccactggctccgtcgagatcttcttctcacgcaacaacgcactcttcgcttcctcaaagatgaaggttctccagcgcatcgcttacctcaacgttggcatctaccccttcacctccgtcttcctcatcgtctactgcttcctcccggcgctctccctcttctcggggcagttcatcgtgcagacgctcaacgtcaccttcctcacctacctgctcatcatcaccatcacgctctgcctcctggccatgctggagatcaagtggtccggcatcgcgctggaggagtggtggcggaacgagcagttctggctcatcggcggaaccagcgcccacctcgccgccgtcctgcagggccttctcaaggtcatcgccggcatcgagatctccttcaccctcacctccaagcagctcggcgacgacgtcgacgacgagttcgccgagctctacgcggtcaagtggacgtccctcatgataccgccgctcaccatcataatgatcaacctcgtcgccatcgccgtcggcttcagccgcaccatctacagcaccatcccgcagtggagcaagcttctcggtggagtcttcttcagcttctgggtcctcgcgcatctctaccccttcgccaagggcctcatgggcaggaggggaaggacacccaccatcgtctacgtctggtctggcctcgtcgccatcaccatctccttgctctggattgcaatcaagcctccttctgcacaagccaactcacagctaggaggatccttctctttcccctga</cdnaseq>

Protein Sequence

<aaseq>ATGSVEIFFSRNNALFASSKMKVLQRIAYLNVGIYPFTSVFLIV YCFLPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSGIALEEWWRNEQF WLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKQLGDDVDDEFAELYAVKWTSLMIPP LTIIMINLVAIAVGFSRTIYSTIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTP TIVYVWSGLVAITISLLWIAIKPPSAQANSQLGGSFSFP</aaseq>

Gene Sequence

<dnaseqindica>3..68#156..863#gggccactggctccgtcgagatcttcttctcacgcaacaacgcactcttcgcttcctcaaagatgaaggtacctagcttgctattcgatcgattatttttcttcttcttcttcttccgctgccgccaaacaaacaattatccattgcatttgcaggttctccagcgcatcgcttacctcaacgttggcatctaccccttcacctccgtcttcctcatcgtctactgcttcctcccggcgctctccctcttctcggggcagttcatcgtgcagacgctcaacgtcaccttcctcacctacctgctcatcatcaccatcacgctctgcctcctggccatgctggagatcaagtggtccggcatcgcgctggaggagtggtggcggaacgagcagttctggctcatcggcggaaccagcgcccacctcgccgccgtcctgcagggccttctcaaggtcatcgccggcatcgagatctccttcaccctcacctccaagcagctcggcgacgacgtcgacgacgagttcgccgagctctacgcggtcaagtggacgtccctcatgataccgccgctcaccatcataatgatcaacctcgtcgccatcgccgtcggcttcagccgcaccatctacagcaccatcccgcagtggagcaagcttctcggtggagtcttcttcagcttctgggtcctcgcgcatctctaccccttcgccaagggcctcatgggcaggaggggaaggacacccaccatcgtctacgtctggtctggcctcgtcgccatcaccatctccttgctctggattgcaatcaagcctccttctgcacaagccaactcacagctaggaggatccttctctttcccctgatatacatatattctcattccacacacccaatccagactacctgtctctctgctatctgcttgcttaggattcattcatatgctagctggtcgatcgagctaccgcagcctagggaacatgatcatatcacccacagtctgtttgcttcatggagcaaactgcacttcaccccagtccagatctgcttcttcacagtgagtgagatcactatttttgcttgtttgtgatttttttttctaaaattgtttagagctcattgtcatttgaatggcattcctagaaaagggagaaagaaaagacacttgacatcaacacaggtgtaatacattgttactagagaatcggcaatataatgttactagagtatc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0578200, RefSeq:Os10g0578200